RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 MCRIP1C9JLW8 97 aa13.26□□□□□ -0.29
PTPN9-201ENST00000306726 TACSTD2P09758 323 aa13.26□□□□□ -0.29
PTPN9-201ENST00000306726 CALCBP10092 127 aa13.26□□□□□ -0.29
PTPN9-201ENST00000306726 PPP3CBP16298 524 aa13.26□□□□□ -0.29
PTPN9-201ENST00000306726 MMP15P51511 669 aa13.26□□□□□ -0.29
PTPN9-201ENST00000306726 ACTA2P62736 377 aa13.26□□□□□ -0.29
PTPN9-201ENST00000306726 ACTG2P63267 376 aa13.26□□□□□ -0.29
PTPN9-201ENST00000306726 UBE2IP63279 158 aaKnown RBP13.26□□□□□ -0.29
PTPN9-201ENST00000306726 CHAF1BQ13112 559 aa13.26□□□□□ -0.29
PTPN9-201ENST00000306726 EIF2B5Q13144 721 aaKnown RBP13.26□□□□□ -0.29
PTPN9-201ENST00000306726 SLC22A6Q4U2R8 563 aa13.26□□□□□ -0.29
PTPN9-201ENST00000306726 GPAT4Q86UL3 456 aa13.26□□□□□ -0.29
PTPN9-201ENST00000306726 GVQW1Q8N7I0 195 aa13.26□□□□□ -0.29
PTPN9-201ENST00000306726 FAM181AQ8N9Y4 354 aa13.26□□□□□ -0.29
PTPN9-201ENST00000306726 SLC25A28Q96A46 364 aa13.26□□□□□ -0.29
PTPN9-201ENST00000306726 MRPL48Q96GC5 212 aaKnown RBP13.26□□□□□ -0.29
PTPN9-201ENST00000306726 HEXA-AS1Q9H8Q6 139 aa13.26□□□□□ -0.29
PTPN9-201ENST00000306726 CHMP1AQ9HD42 196 aaPredicted RBP13.26□□□□□ -0.29
PTPN9-201ENST00000306726 A0A0G2JK05 382 aa13.26□□□□□ -0.29
PTPN9-201ENST00000306726 MFSD13AQ14CX5 517 aa13.26□□□□□ -0.29
PTPN9-201ENST00000306726 CLLU1Q5K131 121 aa13.26□□□□□ -0.29
PTPN9-201ENST00000306726 RPL22L1Q6P5R6 122 aaKnown RBP13.26□□□□□ -0.29
PTPN9-201ENST00000306726 BPIFB2Q8N4F0 458 aa13.26□□□□□ -0.29
PTPN9-201ENST00000306726 INO80EQ8NBZ0 244 aaPredicted RBP13.26□□□□□ -0.29
PTPN9-201ENST00000306726 ZNF681Q96N22 645 aa13.26□□□□□ -0.29
PTPN9-201ENST00000306726 EMC6Q9BV81 110 aa13.26□□□□□ -0.29
PTPN9-201ENST00000306726 NPFFR2Q9Y5X5 522 aa13.26□□□□□ -0.29
PTPN9-201ENST00000306726 ICE1Q9Y2F5 2266 aa13.25□□□□□ -0.29
PTPN9-201ENST00000306726 PRR32B1ATL7 298 aa13.25□□□□□ -0.29
PTPN9-201ENST00000306726 KNG1P01042 644 aa13.25□□□□□ -0.29
PTPN9-201ENST00000306726 HLA-DQB1P01920 261 aa13.25□□□□□ -0.29
PTPN9-201ENST00000306726 GLAP06280 429 aa13.25□□□□□ -0.29
PTPN9-201ENST00000306726 OR2T7P0C7T2 308 aa13.25□□□□□ -0.29
PTPN9-201ENST00000306726 MYF5P13349 255 aa13.25□□□□□ -0.29
PTPN9-201ENST00000306726 CD34P28906 385 aa13.25□□□□□ -0.29
PTPN9-201ENST00000306726 ARFIP1P53367 373 aa13.25□□□□□ -0.29
PTPN9-201ENST00000306726 OR1J2Q8NGS2 313 aa13.25□□□□□ -0.29
PTPN9-201ENST00000306726 OR2T27Q8NH04 317 aa13.25□□□□□ -0.29
PTPN9-201ENST00000306726 KISS1RQ969F8 398 aaPredicted RBP13.25□□□□□ -0.29
PTPN9-201ENST00000306726 MOAP1Q96BY2 351 aa13.25□□□□□ -0.29
PTPN9-201ENST00000306726 ZC3HAV1LQ96H79 300 aaKnown RBP13.25□□□□□ -0.29
PTPN9-201ENST00000306726 VRK1Q99986 396 aaPredicted RBP13.25□□□□□ -0.29
PTPN9-201ENST00000306726 CKLFQ9UBR5 152 aa13.25□□□□□ -0.29
PTPN9-201ENST00000306726 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.25□□□□□ -0.29
PTPN9-201ENST00000306726 DIDO1Q9BTC0 2240 aaKnown RBP13.25□□□□□ -0.29
PTPN9-201ENST00000306726 DOCK7Q96N67 2140 aa13.25□□□□□ -0.29
PTPN9-201ENST00000306726 ABCA7Q8IZY2 2146 aa13.25□□□□□ -0.29
PTPN9-201ENST00000306726 RPS21P63220 83 aaKnown RBP13.25□□□□□ -0.29
PTPN9-201ENST00000306726 KLF9Q13886 244 aaPredicted RBP13.25□□□□□ -0.29
PTPN9-201ENST00000306726 AGBL4Q5VU57 503 aa13.25□□□□□ -0.29
PTPN9-201ENST00000306726 DMKNQ6E0U4 476 aaPredicted RBP13.25□□□□□ -0.29
PTPN9-201ENST00000306726 FAM122CQ6P4D5 195 aa13.25□□□□□ -0.29
PTPN9-201ENST00000306726 CLEC9AQ6UXN8 241 aa13.25□□□□□ -0.29
PTPN9-201ENST00000306726 CD300LDQ6UXZ3 194 aa13.25□□□□□ -0.29
PTPN9-201ENST00000306726 COX15Q7KZN9 410 aa13.25□□□□□ -0.29
PTPN9-201ENST00000306726 SLC25A44Q96H78 314 aaPredicted RBP13.25□□□□□ -0.29
PTPN9-201ENST00000306726 TGM7Q96PF1 710 aa13.25□□□□□ -0.29
PTPN9-201ENST00000306726 AMELYQ99218 206 aa13.25□□□□□ -0.29
PTPN9-201ENST00000306726 METTL8Q9H825 291 aaKnown RBP13.25□□□□□ -0.29
PTPN9-201ENST00000306726 ALOX12BO75342 701 aa13.25□□□□□ -0.29
PTPN9-201ENST00000306726 NUDT1P36639 197 aa13.25□□□□□ -0.29
PTPN9-201ENST00000306726 SYT13Q7L8C5 426 aa13.25□□□□□ -0.29
PTPN9-201ENST00000306726 C12orf45Q8N5I9 185 aaPredicted RBP13.25□□□□□ -0.29
PTPN9-201ENST00000306726 MFSD9Q8NBP5 474 aa13.25□□□□□ -0.29
PTPN9-201ENST00000306726 TMED6Q8WW62 240 aa13.25□□□□□ -0.29
PTPN9-201ENST00000306726 SLC25A38Q96DW6 304 aa13.25□□□□□ -0.29
PTPN9-201ENST00000306726 EPHX3Q9H6B9 360 aa13.25□□□□□ -0.29
PTPN9-201ENST00000306726 FAM60AQ9NP50 221 aa13.25□□□□□ -0.29
PTPN9-201ENST00000306726 DHCR7Q9UBM7 475 aaKnown RBP13.25□□□□□ -0.29
PTPN9-201ENST00000306726 FAM96BQ9Y3D0 163 aa13.25□□□□□ -0.29
PTPN9-201ENST00000306726 TRANK1O15050 2925 aa13.25□□□□□ -0.29
PTPN9-201ENST00000306726 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.24□□□□□ -0.29
PTPN9-201ENST00000306726 IGHV3-20A0A0C4DH32 117 aa13.24□□□□□ -0.29
PTPN9-201ENST00000306726 SLC22A23A1A5C7 686 aa13.24□□□□□ -0.29
PTPN9-201ENST00000306726 GPR89AB7ZAQ6 455 aa13.24□□□□□ -0.29
PTPN9-201ENST00000306726 GPR89BP0CG08 455 aa13.24□□□□□ -0.29
PTPN9-201ENST00000306726 PVALBP20472 110 aaPredicted RBP13.24□□□□□ -0.29
PTPN9-201ENST00000306726 RAP2BP61225 183 aa13.24□□□□□ -0.29
PTPN9-201ENST00000306726 RPS15AP62244 130 aaKnown RBP13.24□□□□□ -0.29
PTPN9-201ENST00000306726 ARFRP1Q13795 201 aa13.24□□□□□ -0.29
PTPN9-201ENST00000306726 STEAP1BQ6NZ63 245 aa13.24□□□□□ -0.29
PTPN9-201ENST00000306726 OR2AK2Q8NG84 335 aa13.24□□□□□ -0.29
PTPN9-201ENST00000306726 OR51A2Q8NGJ7 313 aa13.24□□□□□ -0.29
PTPN9-201ENST00000306726 SFXN5Q8TD22 340 aa13.24□□□□□ -0.29
PTPN9-201ENST00000306726 GIMAP5Q96F15 307 aa13.24□□□□□ -0.29
PTPN9-201ENST00000306726 KLHDC3Q9BQ90 382 aa13.24□□□□□ -0.29
PTPN9-201ENST00000306726 PRTFDC1Q9NRG1 225 aa13.24□□□□□ -0.29
PTPN9-201ENST00000306726 MED17Q9NVC6 651 aa13.24□□□□□ -0.29
PTPN9-201ENST00000306726 DHDHQ9UQ10 334 aa13.24□□□□□ -0.29
PTPN9-201ENST00000306726 EMC9Q9Y3B6 208 aa13.24□□□□□ -0.29
PTPN9-201ENST00000306726 PHF3Q92576 2039 aaKnown RBP13.24□□□□□ -0.29
PTPN9-201ENST00000306726 RPS10-NUDT3A0A1W2PQS6 291 aa13.24□□□□□ -0.29
PTPN9-201ENST00000306726 GABARAPH6UMI1 98 aa13.24□□□□□ -0.29
PTPN9-201ENST00000306726 RENP00797 406 aa13.24□□□□□ -0.29
PTPN9-201ENST00000306726 NMBP08949 121 aa13.24□□□□□ -0.29
PTPN9-201ENST00000306726 ARHGAP11BQ3KRB8 267 aa13.24□□□□□ -0.29
PTPN9-201ENST00000306726 IL17RCQ8NAC3 791 aa13.24□□□□□ -0.29
PTPN9-201ENST00000306726 THAP6Q8TBB0 222 aa13.24□□□□□ -0.29
PTPN9-201ENST00000306726 TMEM82A0PJX8 343 aa13.24□□□□□ -0.29
PTPN9-201ENST00000306726 C7orf66A4D0T2 115 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms