RNA–Protein interactions for RNA: ENST00000306324.3

HOXD4-201, Transcript of homeobox D4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD4, Length 1,464 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD4-201ENST00000306324 IGFBP5P24593 272 aa19.58■□□□□ 0.72
HOXD4-201ENST00000306324 PPA1Q15181 289 aa19.58■□□□□ 0.72
HOXD4-201ENST00000306324 C10orf128Q5T292 105 aa19.58■□□□□ 0.72
HOXD4-201ENST00000306324 ZNF787Q6DD87 383 aa19.58■□□□□ 0.72
HOXD4-201ENST00000306324 OR52E2Q8NGJ4 325 aa19.58■□□□□ 0.72
HOXD4-201ENST00000306324 RBM4BQ9BQ04 359 aaKnown RBP19.58■□□□□ 0.72
HOXD4-201ENST00000306324 RBM4Q9BWF3 364 aaKnown RBP19.58■□□□□ 0.72
HOXD4-201ENST00000306324 NELFAQ9H3P2 528 aa19.58■□□□□ 0.72
HOXD4-201ENST00000306324 RERGLQ9H628 205 aa19.58■□□□□ 0.72
HOXD4-201ENST00000306324 ASH1LQ9NR48 2969 aaKnown RBP19.58■□□□□ 0.72
HOXD4-201ENST00000306324 SLC17A5Q9NRA2 495 aa19.58■□□□□ 0.72
HOXD4-201ENST00000306324 AHCYL1O43865 530 aa19.57■□□□□ 0.72
HOXD4-201ENST00000306324 RENP00797 406 aa19.57■□□□□ 0.72
HOXD4-201ENST00000306324 ANPEPP15144 967 aa19.57■□□□□ 0.72
HOXD4-201ENST00000306324 ZNF133P52736 654 aaPredicted RBP19.57■□□□□ 0.72
HOXD4-201ENST00000306324 PPP2R2BQ00005 443 aa19.57■□□□□ 0.72
HOXD4-201ENST00000306324 KHDRBS1Q07666 443 aaKnown RBP eCLIP19.57■□□□□ 0.72
HOXD4-201ENST00000306324 GINS1Q14691 196 aa19.57■□□□□ 0.72
HOXD4-201ENST00000306324 PGGHGQ32M88 737 aa19.57■□□□□ 0.72
HOXD4-201ENST00000306324 SLC27A4Q6P1M0 643 aa19.57■□□□□ 0.72
HOXD4-201ENST00000306324 SLC25A47Q6Q0C1 308 aa19.57■□□□□ 0.72
HOXD4-201ENST00000306324 PARP8Q8N3A8 854 aa19.57■□□□□ 0.72
HOXD4-201ENST00000306324 OSBPL10Q9BXB5 764 aa19.57■□□□□ 0.72
HOXD4-201ENST00000306324 VSX1Q9NZR4 365 aaPredicted RBP19.57■□□□□ 0.72
HOXD4-201ENST00000306324 TMEFF2Q9UIK5 374 aaPredicted RBP19.57■□□□□ 0.72
HOXD4-201ENST00000306324 ABCA4P78363 2273 aa19.57■□□□□ 0.72
HOXD4-201ENST00000306324 H0YHG0 523 aa19.56■□□□□ 0.72
HOXD4-201ENST00000306324 EI24O14681 340 aa19.56■□□□□ 0.72
HOXD4-201ENST00000306324 GIPRP48546 466 aa19.56■□□□□ 0.72
HOXD4-201ENST00000306324 CRISP1P54107 249 aa19.56■□□□□ 0.72
HOXD4-201ENST00000306324 UBE2NP61088 152 aaKnown RBP19.56■□□□□ 0.72
HOXD4-201ENST00000306324 CBR4Q8N4T8 237 aa19.56■□□□□ 0.72
HOXD4-201ENST00000306324 WDR31Q8NA23 367 aa19.56■□□□□ 0.72
HOXD4-201ENST00000306324 HTRA1Q92743 480 aa19.56■□□□□ 0.72
HOXD4-201ENST00000306324 MARVELD3Q96A59 401 aa19.56■□□□□ 0.72
HOXD4-201ENST00000306324 TMEM38BQ9NVV0 291 aa19.56■□□□□ 0.72
HOXD4-201ENST00000306324 AMDHD2Q9Y303 409 aa19.56■□□□□ 0.72
HOXD4-201ENST00000306324 NBPF19A0A087WUL8 3843 aa19.56■□□□□ 0.72
HOXD4-201ENST00000306324 SLC16A7O60669 478 aa19.55■□□□□ 0.72
HOXD4-201ENST00000306324 CTLA4P16410 223 aa19.55■□□□□ 0.72
HOXD4-201ENST00000306324 CDAP32320 146 aa19.55■□□□□ 0.72
HOXD4-201ENST00000306324 CAPZA2P47755 286 aa19.55■□□□□ 0.72
HOXD4-201ENST00000306324 ESRRGP62508 458 aa19.55■□□□□ 0.72
HOXD4-201ENST00000306324 TUBA1BP68363 451 aa19.55■□□□□ 0.72
HOXD4-201ENST00000306324 TUBA4AP68366 448 aa19.55■□□□□ 0.72
HOXD4-201ENST00000306324 DAG1Q14118 895 aa19.55■□□□□ 0.72
HOXD4-201ENST00000306324 ETFDHQ16134 617 aa19.55■□□□□ 0.72
HOXD4-201ENST00000306324 TMEM236Q5W0B7 351 aa19.55■□□□□ 0.72
HOXD4-201ENST00000306324 TUBA1AQ71U36 451 aa19.55■□□□□ 0.72
HOXD4-201ENST00000306324 EME1Q96AY2 570 aa19.55■□□□□ 0.72
HOXD4-201ENST00000306324 BOD1Q96IK1 185 aa19.55■□□□□ 0.72
HOXD4-201ENST00000306324 C9orf16Q9BUW7 83 aa19.55■□□□□ 0.72
HOXD4-201ENST00000306324 NUAK2Q9H093 628 aa19.55■□□□□ 0.72
HOXD4-201ENST00000306324 FN3KQ9H479 309 aa19.55■□□□□ 0.72
HOXD4-201ENST00000306324 SEC61A2Q9H9S3 476 aa19.55■□□□□ 0.72
HOXD4-201ENST00000306324 RPRD1BQ9NQG5 326 aaKnown RBP19.55■□□□□ 0.72
HOXD4-201ENST00000306324 SLC25A15Q9Y619 301 aa19.55■□□□□ 0.72
HOXD4-201ENST00000306324 FLNBO75369 2602 aaKnown RBP19.55■□□□□ 0.72
HOXD4-201ENST00000306324 A0A1W2PPL8 197 aa19.54■□□□□ 0.72
HOXD4-201ENST00000306324 OR6C68A6NDL8 312 aa19.54■□□□□ 0.72
HOXD4-201ENST00000306324 CRYGSP22914 178 aa19.54■□□□□ 0.72
HOXD4-201ENST00000306324 GRK5P34947 590 aa19.54■□□□□ 0.72
HOXD4-201ENST00000306324 CDK5Q00535 292 aa19.54■□□□□ 0.72
HOXD4-201ENST00000306324 ACSM5Q6NUN0 579 aa19.54■□□□□ 0.72
HOXD4-201ENST00000306324 ZNF627Q7L945 461 aa19.54■□□□□ 0.72
HOXD4-201ENST00000306324 SLC22A24Q8N4F4 322 aa19.54■□□□□ 0.72
HOXD4-201ENST00000306324 CYB561A3Q8NBI2 242 aa19.54■□□□□ 0.72
HOXD4-201ENST00000306324 TSSK2Q96PF2 358 aa19.54■□□□□ 0.72
HOXD4-201ENST00000306324 SNX18Q96RF0 628 aa19.54■□□□□ 0.72
HOXD4-201ENST00000306324 C1QTNF6Q9BXI9 259 aa19.54■□□□□ 0.72
HOXD4-201ENST00000306324 ENOPH1Q9UHY7 261 aa19.54■□□□□ 0.72
HOXD4-201ENST00000306324 KLHL21Q9UJP4 597 aa19.54■□□□□ 0.72
HOXD4-201ENST00000306324 UGT2A1Q9Y4X1 527 aa19.54■□□□□ 0.72
HOXD4-201ENST00000306324 ORC6Q9Y5N6 252 aa19.54■□□□□ 0.72
HOXD4-201ENST00000306324 CADP27708 2225 aa19.54■□□□□ 0.72
HOXD4-201ENST00000306324 RIIAD1A6NNX1 92 aa19.54■□□□□ 0.72
HOXD4-201ENST00000306324 FARS2O95363 451 aaKnown RBP19.54■□□□□ 0.72
HOXD4-201ENST00000306324 WNT11O96014 354 aa19.54■□□□□ 0.72
HOXD4-201ENST00000306324 IFNGP01579 166 aa19.54■□□□□ 0.72
HOXD4-201ENST00000306324 ALPLP05186 524 aa19.54■□□□□ 0.72
HOXD4-201ENST00000306324 OR8G3PP0DMU2 310 aa19.54■□□□□ 0.72
HOXD4-201ENST00000306324 GUCA1AP43080 201 aaPredicted RBP19.54■□□□□ 0.72
HOXD4-201ENST00000306324 PTGES3Q15185 160 aaKnown RBP19.54■□□□□ 0.72
HOXD4-201ENST00000306324 ZBTB49Q6ZSB9 765 aa19.54■□□□□ 0.72
HOXD4-201ENST00000306324 SSX8Q7RTT4 187 aa19.54■□□□□ 0.72
HOXD4-201ENST00000306324 SLC37A3Q8NCC5 494 aa19.54■□□□□ 0.72
HOXD4-201ENST00000306324 NPEPL1Q8NDH3 523 aa19.54■□□□□ 0.72
HOXD4-201ENST00000306324 FOXN4Q96NZ1 517 aa19.54■□□□□ 0.72
HOXD4-201ENST00000306324 TEX12Q9BXU0 123 aa19.54■□□□□ 0.72
HOXD4-201ENST00000306324 SRA1Q9HD15 236 aaKnown RBP19.54■□□□□ 0.72
HOXD4-201ENST00000306324 NGBQ9NPG2 151 aa19.54■□□□□ 0.72
HOXD4-201ENST00000306324 HRNRQ86YZ3 2850 aaPredicted RBP19.53■□□□□ 0.72
HOXD4-201ENST00000306324 KHDRBS3O75525 346 aaKnown RBP19.53■□□□□ 0.72
HOXD4-201ENST00000306324 HOXB1P14653 301 aaPredicted RBP19.53■□□□□ 0.72
HOXD4-201ENST00000306324 CRABP1P29762 137 aa19.53■□□□□ 0.72
HOXD4-201ENST00000306324 ALDH3A2P51648 485 aa19.53■□□□□ 0.72
HOXD4-201ENST00000306324 DBPQ10586 325 aaPredicted RBP19.53■□□□□ 0.72
HOXD4-201ENST00000306324 CRMP1Q14194 572 aa19.53■□□□□ 0.72
HOXD4-201ENST00000306324 DAZAP2Q15038 168 aaPredicted RBP19.53■□□□□ 0.72
HOXD4-201ENST00000306324 TRIP10Q15642 601 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms