RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 RNF121Q9H920 327 aa22.85■■□□□ 1.25
CDKN2A-201ENST00000304494 NMNAT1Q9HAN9 279 aaPredicted RBP22.85■■□□□ 1.25
CDKN2A-201ENST00000304494 CTXN1P60606 82 aa22.84■■□□□ 1.25
CDKN2A-201ENST00000304494 CD47Q08722 323 aa22.84■■□□□ 1.25
CDKN2A-201ENST00000304494 TOP3AQ13472 1001 aaPredicted RBP22.84■■□□□ 1.25
CDKN2A-201ENST00000304494 GKAP1Q5VSY0 366 aaPredicted RBP22.84■■□□□ 1.25
CDKN2A-201ENST00000304494 PGAM4Q8N0Y7 254 aa22.84■■□□□ 1.25
CDKN2A-201ENST00000304494 RNF148Q8N7C7 305 aa22.84■■□□□ 1.25
CDKN2A-201ENST00000304494 RBM15BQ8NDT2 890 aaKnown RBP22.84■■□□□ 1.25
CDKN2A-201ENST00000304494 OR51A7Q8NH64 312 aa22.84■■□□□ 1.25
CDKN2A-201ENST00000304494 FGFBP3Q8TAT2 258 aa22.84■■□□□ 1.25
CDKN2A-201ENST00000304494 HDAC2Q92769 488 aaKnown RBP22.84■■□□□ 1.25
CDKN2A-201ENST00000304494 ALG12Q9BV10 488 aa22.84■■□□□ 1.25
CDKN2A-201ENST00000304494 RAB1BQ9H0U4 201 aa22.84■■□□□ 1.25
CDKN2A-201ENST00000304494 KCNN2Q9H2S1 579 aa22.84■■□□□ 1.25
CDKN2A-201ENST00000304494 MYOZ1Q9NP98 299 aaPredicted RBP22.84■■□□□ 1.25
CDKN2A-201ENST00000304494 NDE1Q9NXR1 346 aa22.84■■□□□ 1.25
CDKN2A-201ENST00000304494 MAGEL2Q9UJ55 1249 aa22.84■■□□□ 1.25
CDKN2A-201ENST00000304494 TMEM5Q9Y2B1 443 aa22.84■■□□□ 1.25
CDKN2A-201ENST00000304494 TRAV27A0A087WT01 109 aa22.83■■□□□ 1.25
CDKN2A-201ENST00000304494 A0A1W2PRQ8 180 aa22.83■■□□□ 1.25
CDKN2A-201ENST00000304494 PTHP01270 115 aa22.83■■□□□ 1.25
CDKN2A-201ENST00000304494 H1F0P07305 194 aaKnown RBP22.83■■□□□ 1.25
CDKN2A-201ENST00000304494 RHCEP18577 417 aa22.83■■□□□ 1.25
CDKN2A-201ENST00000304494 RPS23P62266 143 aaKnown RBP22.83■■□□□ 1.25
CDKN2A-201ENST00000304494 DGCR6Q14129 220 aa22.83■■□□□ 1.25
CDKN2A-201ENST00000304494 SAMD4BQ5PRF9 694 aaKnown RBP22.83■■□□□ 1.25
CDKN2A-201ENST00000304494 TMPRSS11FQ6ZWK6 438 aa22.83■■□□□ 1.25
CDKN2A-201ENST00000304494 ZNF584Q8IVC4 421 aa22.83■■□□□ 1.25
CDKN2A-201ENST00000304494 SVOPLQ8N434 492 aa22.83■■□□□ 1.25
CDKN2A-201ENST00000304494 C10orf105Q8TEF2 133 aa22.83■■□□□ 1.25
CDKN2A-201ENST00000304494 RBP7Q96R05 134 aa22.83■■□□□ 1.25
CDKN2A-201ENST00000304494 KCNK17Q96T54 332 aa22.83■■□□□ 1.25
CDKN2A-201ENST00000304494 DOK1Q99704 481 aa22.83■■□□□ 1.25
CDKN2A-201ENST00000304494 NDEL1Q9GZM8 345 aa22.83■■□□□ 1.25
CDKN2A-201ENST00000304494 SIAEQ9HAT2 523 aa22.83■■□□□ 1.25
CDKN2A-201ENST00000304494 NDUFAF4Q9P032 175 aa22.83■■□□□ 1.25
CDKN2A-201ENST00000304494 SLC7A8Q9UHI5 535 aa22.83■■□□□ 1.25
CDKN2A-201ENST00000304494 ZNF346Q9UL40 294 aaKnown RBP22.83■■□□□ 1.25
CDKN2A-201ENST00000304494 A6NIZ1 184 aa22.82■■□□□ 1.24
CDKN2A-201ENST00000304494 LY6HO94772 140 aa22.82■■□□□ 1.24
CDKN2A-201ENST00000304494 SLC2A10O95528 541 aa22.82■■□□□ 1.24
CDKN2A-201ENST00000304494 HSD17B1P14061 328 aa22.82■■□□□ 1.24
CDKN2A-201ENST00000304494 TCN1P20061 433 aaPredicted RBP22.82■■□□□ 1.24
CDKN2A-201ENST00000304494 PCSK6P29122 969 aa22.82■■□□□ 1.24
CDKN2A-201ENST00000304494 GLRXP35754 106 aa22.82■■□□□ 1.24
CDKN2A-201ENST00000304494 EVX1P49640 407 aa22.82■■□□□ 1.24
CDKN2A-201ENST00000304494 PDLIM4P50479 330 aa22.82■■□□□ 1.24
CDKN2A-201ENST00000304494 RAP1BP61224 184 aa22.82■■□□□ 1.24
CDKN2A-201ENST00000304494 RAP1AP62834 184 aa22.82■■□□□ 1.24
CDKN2A-201ENST00000304494 MRPS34P82930 218 aaKnown RBP22.82■■□□□ 1.24
CDKN2A-201ENST00000304494 KRTAP1-1Q07627 177 aa22.82■■□□□ 1.24
CDKN2A-201ENST00000304494 THEM4Q5T1C6 240 aa22.82■■□□□ 1.24
CDKN2A-201ENST00000304494 TBPL2Q6SJ96 375 aa22.82■■□□□ 1.24
CDKN2A-201ENST00000304494 TSEN54Q7Z6J9 526 aaKnown RBP22.82■■□□□ 1.24
CDKN2A-201ENST00000304494 IGFN1Q86VF2 1251 aa22.82■■□□□ 1.24
CDKN2A-201ENST00000304494 MEX3DQ86XN8 651 aaKnown RBP22.82■■□□□ 1.24
CDKN2A-201ENST00000304494 LRRC75AQ8NAA5 344 aa22.82■■□□□ 1.24
CDKN2A-201ENST00000304494 SLC30A7Q8NEW0 376 aa22.82■■□□□ 1.24
CDKN2A-201ENST00000304494 OR13C2Q8NGS9 318 aa22.82■■□□□ 1.24
CDKN2A-201ENST00000304494 NMD3Q96D46 503 aaKnown RBP22.82■■□□□ 1.24
CDKN2A-201ENST00000304494 TNFRSF13CQ96RJ3 184 aa22.82■■□□□ 1.24
CDKN2A-201ENST00000304494 DYNLRB1Q9NP97 96 aa22.82■■□□□ 1.24
CDKN2A-201ENST00000304494 ARL8BQ9NVJ2 186 aa22.82■■□□□ 1.24
CDKN2A-201ENST00000304494 SLC22A23A1A5C7 686 aa22.81■■□□□ 1.24
CDKN2A-201ENST00000304494 INAFM1C9JVW0 142 aa22.81■■□□□ 1.24
CDKN2A-201ENST00000304494 NDUFS8O00217 210 aa22.81■■□□□ 1.24
CDKN2A-201ENST00000304494 ITGA2P17301 1181 aa22.81■■□□□ 1.24
CDKN2A-201ENST00000304494 GPR4P46093 362 aa22.81■■□□□ 1.24
CDKN2A-201ENST00000304494 PLP2Q04941 152 aa22.81■■□□□ 1.24
CDKN2A-201ENST00000304494 LOXL1Q08397 574 aaPredicted RBP22.81■■□□□ 1.24
CDKN2A-201ENST00000304494 FHL1Q13642 323 aa22.81■■□□□ 1.24
CDKN2A-201ENST00000304494 KRT72Q14CN4 511 aa22.81■■□□□ 1.24
CDKN2A-201ENST00000304494 FXNQ16595 210 aa22.81■■□□□ 1.24
CDKN2A-201ENST00000304494 C16orf89Q6UX73 402 aa22.81■■□□□ 1.24
CDKN2A-201ENST00000304494 ANKS4BQ8N8V4 417 aa22.81■■□□□ 1.24
CDKN2A-201ENST00000304494 FAM156AQ8NDB6 213 aa22.81■■□□□ 1.24
CDKN2A-201ENST00000304494 SLC7A13Q8TCU3 470 aa22.81■■□□□ 1.24
CDKN2A-201ENST00000304494 MRPL24Q96A35 216 aaKnown RBP22.81■■□□□ 1.24
CDKN2A-201ENST00000304494 C7orf34Q96L11 122 aa22.81■■□□□ 1.24
CDKN2A-201ENST00000304494 KRCC1Q9NPI7 259 aaPredicted RBP22.81■■□□□ 1.24
CDKN2A-201ENST00000304494 A0A096LNT2 108 aa22.8■■□□□ 1.24
CDKN2A-201ENST00000304494 IQCMA0A1B0GVH7 501 aa22.8■■□□□ 1.24
CDKN2A-201ENST00000304494 TMEM129A0AVI4 362 aa22.8■■□□□ 1.24
CDKN2A-201ENST00000304494 RPL4P36578 427 aaKnown RBP22.8■■□□□ 1.24
CDKN2A-201ENST00000304494 MXRA7P84157 204 aa22.8■■□□□ 1.24
CDKN2A-201ENST00000304494 FMODQ06828 376 aa22.8■■□□□ 1.24
CDKN2A-201ENST00000304494 ZBED5Q49AG3 693 aa22.8■■□□□ 1.24
CDKN2A-201ENST00000304494 FGD3Q5JSP0 725 aa22.8■■□□□ 1.24
CDKN2A-201ENST00000304494 PODNL1Q6PEZ8 512 aa22.8■■□□□ 1.24
CDKN2A-201ENST00000304494 LRRC18Q8N456 261 aa22.8■■□□□ 1.24
CDKN2A-201ENST00000304494 ZNF519Q8TB69 540 aa22.8■■□□□ 1.24
CDKN2A-201ENST00000304494 NEU4Q8WWR8 484 aaPredicted RBP22.8■■□□□ 1.24
CDKN2A-201ENST00000304494 NSMAFQ92636 917 aa22.8■■□□□ 1.24
CDKN2A-201ENST00000304494 TSPAN32Q96QS1 320 aa22.8■■□□□ 1.24
CDKN2A-201ENST00000304494 UGT2A1Q9Y4X1 527 aa22.8■■□□□ 1.24
CDKN2A-201ENST00000304494 CDC42EP2O14613 210 aa22.79■■□□□ 1.24
CDKN2A-201ENST00000304494 TLX2O43763 284 aaPredicted RBP22.79■■□□□ 1.24
CDKN2A-201ENST00000304494 CD5LO43866 347 aa22.79■■□□□ 1.24
CDKN2A-201ENST00000304494 GPRIN2O60269 458 aa22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms