RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 DPPA4Q7L190 304 aa9.59□□□□□ -0.87
CLIP1-201ENST00000302528 ADGRE4PQ86SQ3 457 aa9.59□□□□□ -0.87
CLIP1-201ENST00000302528 TMEM130Q8N3G9 435 aa9.59□□□□□ -0.87
CLIP1-201ENST00000302528 OR2T11Q8NH01 316 aa9.59□□□□□ -0.87
CLIP1-201ENST00000302528 SEH1LQ96EE3 360 aa9.59□□□□□ -0.87
CLIP1-201ENST00000302528 PKMYT1Q99640 499 aa9.59□□□□□ -0.87
CLIP1-201ENST00000302528 FBXL4Q9UKA2 621 aa9.59□□□□□ -0.87
CLIP1-201ENST00000302528 RAB22AQ9UL26 194 aa9.59□□□□□ -0.87
CLIP1-201ENST00000302528 TMED7-TICAM2A0A0A6YYA0 188 aa9.59□□□□□ -0.87
CLIP1-201ENST00000302528 KIR2DS1A0A191URI9 304 aa9.59□□□□□ -0.87
CLIP1-201ENST00000302528 GPR171O14626 319 aa9.59□□□□□ -0.87
CLIP1-201ENST00000302528 FGF4P08620 206 aa9.59□□□□□ -0.87
CLIP1-201ENST00000302528 APEX1P27695 318 aaKnown RBP9.59□□□□□ -0.87
CLIP1-201ENST00000302528 CASP3P42574 277 aa9.59□□□□□ -0.87
CLIP1-201ENST00000302528 KIR2DS4P43632 304 aa9.59□□□□□ -0.87
CLIP1-201ENST00000302528 TPMTP51580 245 aa9.59□□□□□ -0.87
CLIP1-201ENST00000302528 FABP9Q0Z7S8 132 aa9.59□□□□□ -0.87
CLIP1-201ENST00000302528 DOC2BQ14184 412 aa9.59□□□□□ -0.87
CLIP1-201ENST00000302528 KIR2DS1Q14954 304 aa9.59□□□□□ -0.87
CLIP1-201ENST00000302528 RTL8BQ17RB0 113 aa9.59□□□□□ -0.87
CLIP1-201ENST00000302528 H3F3CQ6NXT2 135 aa9.59□□□□□ -0.87
CLIP1-201ENST00000302528 GLIPR1L1Q6UWM5 242 aa9.59□□□□□ -0.87
CLIP1-201ENST00000302528 C11orf40Q8WZ69 217 aa9.59□□□□□ -0.87
CLIP1-201ENST00000302528 SMIM12Q96EX1 92 aa9.59□□□□□ -0.87
CLIP1-201ENST00000302528 MENTQ9BUN1 341 aa9.59□□□□□ -0.87
CLIP1-201ENST00000302528 RTL8AQ9BWD3 113 aa9.59□□□□□ -0.87
CLIP1-201ENST00000302528 GORASP2Q9H8Y8 452 aa9.59□□□□□ -0.87
CLIP1-201ENST00000302528 TMED7Q9Y3B3 224 aa9.59□□□□□ -0.87
CLIP1-201ENST00000302528 UBL3O95164 117 aa9.58□□□□□ -0.88
CLIP1-201ENST00000302528 GLAP06280 429 aa9.58□□□□□ -0.88
CLIP1-201ENST00000302528 OR10A3P58181 314 aa9.58□□□□□ -0.88
CLIP1-201ENST00000302528 RPS23P62266 143 aaKnown RBP9.58□□□□□ -0.88
CLIP1-201ENST00000302528 SPCS2Q15005 226 aa9.58□□□□□ -0.88
CLIP1-201ENST00000302528 TUSC1Q2TAM9 212 aa9.58□□□□□ -0.88
CLIP1-201ENST00000302528 HENMT1Q5T8I9 393 aaKnown RBP9.58□□□□□ -0.88
CLIP1-201ENST00000302528 CBLL1Q75N03 491 aa9.58□□□□□ -0.88
CLIP1-201ENST00000302528 HSD11B1LQ7Z5J1 315 aa9.58□□□□□ -0.88
CLIP1-201ENST00000302528 PRSS35Q8N3Z0 413 aa9.58□□□□□ -0.88
CLIP1-201ENST00000302528 OR10AD1Q8NGE0 317 aa9.58□□□□□ -0.88
CLIP1-201ENST00000302528 OR13C8Q8NGS7 320 aa9.58□□□□□ -0.88
CLIP1-201ENST00000302528 NMNAT3Q96T66 252 aa9.58□□□□□ -0.88
CLIP1-201ENST00000302528 LINC00597Q9H2U6 94 aa9.58□□□□□ -0.88
CLIP1-201ENST00000302528 GSTO2Q9H4Y5 243 aa9.58□□□□□ -0.88
CLIP1-201ENST00000302528 CHST11Q9NPF2 352 aa9.58□□□□□ -0.88
CLIP1-201ENST00000302528 MED17Q9NVC6 651 aa9.58□□□□□ -0.88
CLIP1-201ENST00000302528 ADAM29Q9UKF5 820 aa9.58□□□□□ -0.88
CLIP1-201ENST00000302528 TIMM9Q9Y5J7 89 aa9.58□□□□□ -0.88
CLIP1-201ENST00000302528 ETV7Q9Y603 341 aa9.58□□□□□ -0.88
CLIP1-201ENST00000302528 H3BQ06 376 aaPredicted RBP9.58□□□□□ -0.88
CLIP1-201ENST00000302528 TGOLN2O43493 480 aa9.58□□□□□ -0.88
CLIP1-201ENST00000302528 GLCEO94923 617 aa9.58□□□□□ -0.88
CLIP1-201ENST00000302528 SBK2P0C263 348 aa9.58□□□□□ -0.88
CLIP1-201ENST00000302528 RAB38P57729 211 aa9.58□□□□□ -0.88
CLIP1-201ENST00000302528 CTBSQ01459 385 aa9.58□□□□□ -0.88
CLIP1-201ENST00000302528 PDZK1IP1Q13113 114 aa9.58□□□□□ -0.88
CLIP1-201ENST00000302528 KDM4DQ6B0I6 523 aa9.58□□□□□ -0.88
CLIP1-201ENST00000302528 PRR27Q6MZM9 219 aa9.58□□□□□ -0.88
CLIP1-201ENST00000302528 DHRS11Q6UWP2 260 aa9.58□□□□□ -0.88
CLIP1-201ENST00000302528 CDC20BQ86Y33 519 aa9.58□□□□□ -0.88
CLIP1-201ENST00000302528 TMEM123Q8N131 208 aa9.58□□□□□ -0.88
CLIP1-201ENST00000302528 KLHDC1Q8N7A1 406 aa9.58□□□□□ -0.88
CLIP1-201ENST00000302528 TNFRSF13CQ96RJ3 184 aa9.58□□□□□ -0.88
CLIP1-201ENST00000302528 OR51I2Q9H344 312 aa9.58□□□□□ -0.88
CLIP1-201ENST00000302528 ZMAT3Q9HA38 289 aaKnown RBP9.58□□□□□ -0.88
CLIP1-201ENST00000302528 GPR55Q9Y2T6 319 aaPredicted RBP9.58□□□□□ -0.88
CLIP1-201ENST00000302528 KLK4Q9Y5K2 254 aa9.58□□□□□ -0.88
CLIP1-201ENST00000302528 CRYBG1Q9Y4K1 1723 aa9.58□□□□□ -0.88
CLIP1-201ENST00000302528 CLDN24A6NM45 220 aa9.58□□□□□ -0.88
CLIP1-201ENST00000302528 ST8SIA3O43173 380 aa9.58□□□□□ -0.88
CLIP1-201ENST00000302528 NME2P1O60361 137 aa9.58□□□□□ -0.88
CLIP1-201ENST00000302528 TCRBP04435 133 aa9.58□□□□□ -0.88
CLIP1-201ENST00000302528 ARSAP15289 507 aa9.58□□□□□ -0.88
CLIP1-201ENST00000302528 CPEP16870 476 aa9.58□□□□□ -0.88
CLIP1-201ENST00000302528 OR8G1Q15617 311 aa9.58□□□□□ -0.88
CLIP1-201ENST00000302528 HAGHQ16775 308 aa9.58□□□□□ -0.88
CLIP1-201ENST00000302528 NKAIN3Q8N8D7 197 aa9.58□□□□□ -0.88
CLIP1-201ENST00000302528 OR6K3Q8NGY3 331 aa9.58□□□□□ -0.88
CLIP1-201ENST00000302528 C2CD4CQ8TF44 421 aa9.58□□□□□ -0.88
CLIP1-201ENST00000302528 ZDHHC16Q969W1 377 aa9.58□□□□□ -0.88
CLIP1-201ENST00000302528 MN1Q10571 1320 aaPredicted RBP9.58□□□□□ -0.88
CLIP1-201ENST00000302528 ZCWPW2A0A1B0GU75 182 aa9.58□□□□□ -0.88
CLIP1-201ENST00000302528 SERINC4A6NH21 518 aa9.58□□□□□ -0.88
CLIP1-201ENST00000302528 G3V2L1 256 aa9.58□□□□□ -0.88
CLIP1-201ENST00000302528 PAPLNO95428 1278 aa9.58□□□□□ -0.88
CLIP1-201ENST00000302528 PSMB5P28074 263 aa9.58□□□□□ -0.88
CLIP1-201ENST00000302528 DUSP1P28562 367 aa9.58□□□□□ -0.88
CLIP1-201ENST00000302528 SHC1P29353 583 aa9.58□□□□□ -0.88
CLIP1-201ENST00000302528 SLC5A2P31639 672 aa9.58□□□□□ -0.88
CLIP1-201ENST00000302528 RFX2P48378 723 aa9.58□□□□□ -0.88
CLIP1-201ENST00000302528 DCDP81605 110 aaKnown RBP9.58□□□□□ -0.88
CLIP1-201ENST00000302528 C17orf67Q0P5P2 114 aa9.58□□□□□ -0.88
CLIP1-201ENST00000302528 GLYATL3Q5SZD4 288 aa9.58□□□□□ -0.88
CLIP1-201ENST00000302528 MAMDC4Q6UXC1 1216 aa9.58□□□□□ -0.88
CLIP1-201ENST00000302528 OR5AS1Q8N127 324 aa9.58□□□□□ -0.88
CLIP1-201ENST00000302528 GPR26Q8NDV2 337 aa9.58□□□□□ -0.88
CLIP1-201ENST00000302528 OR13D1Q8NGV5 346 aa9.58□□□□□ -0.88
CLIP1-201ENST00000302528 ABHD4Q8TB40 342 aa9.58□□□□□ -0.88
CLIP1-201ENST00000302528 CMTM3Q96MX0 182 aa9.58□□□□□ -0.88
CLIP1-201ENST00000302528 AGPAT4Q9NRZ5 378 aa9.58□□□□□ -0.88
CLIP1-201ENST00000302528 UGT2A1Q9Y4X1 527 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms