RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 ZNF417Q8TAU3 575 aa12.81□□□□□ -0.36
SDC2-201ENST00000302190 RBP7Q96R05 134 aa12.81□□□□□ -0.36
SDC2-201ENST00000302190 TSNAXQ99598 290 aaKnown RBP12.81□□□□□ -0.36
SDC2-201ENST00000302190 WDR77Q9BQA1 342 aaPredicted RBP12.81□□□□□ -0.36
SDC2-201ENST00000302190 ENTPD2Q9Y5L3 495 aa12.81□□□□□ -0.36
SDC2-201ENST00000302190 EP300Q09472 2414 aaPredicted RBP12.81□□□□□ -0.36
SDC2-201ENST00000302190 TMEM269A0A1B0GVZ9 245 aa12.8□□□□□ -0.36
SDC2-201ENST00000302190 RLN2P04090 185 aa12.8□□□□□ -0.36
SDC2-201ENST00000302190 COL9A1P20849 921 aa12.8□□□□□ -0.36
SDC2-201ENST00000302190 FCARP24071 287 aa12.8□□□□□ -0.36
SDC2-201ENST00000302190 TAS2R20P59543 309 aa12.8□□□□□ -0.36
SDC2-201ENST00000302190 SFRP5Q5T4F7 317 aa12.8□□□□□ -0.36
SDC2-201ENST00000302190 WBP2NLQ6ICG8 309 aa12.8□□□□□ -0.36
SDC2-201ENST00000302190 LCN10Q6JVE6 187 aa12.8□□□□□ -0.36
SDC2-201ENST00000302190 CD300LDQ6UXZ3 194 aa12.8□□□□□ -0.36
SDC2-201ENST00000302190 Q6ZTK2 550 aa12.8□□□□□ -0.36
SDC2-201ENST00000302190 BPIFB2Q8N4F0 458 aa12.8□□□□□ -0.36
SDC2-201ENST00000302190 ZNF283Q8N7M2 679 aa12.8□□□□□ -0.36
SDC2-201ENST00000302190 C19orf47Q8N9M1 422 aaKnown RBP12.8□□□□□ -0.36
SDC2-201ENST00000302190 OR13C9Q8NGT0 318 aa12.8□□□□□ -0.36
SDC2-201ENST00000302190 OR6N1Q8NGY5 312 aa12.8□□□□□ -0.36
SDC2-201ENST00000302190 OR10AC1Q8NH08 325 aa12.8□□□□□ -0.36
SDC2-201ENST00000302190 YIPF5Q969M3 257 aa12.8□□□□□ -0.36
SDC2-201ENST00000302190 AICDAQ9GZX7 198 aa12.8□□□□□ -0.36
SDC2-201ENST00000302190 NXF5Q9H1B4 397 aaKnown RBP12.8□□□□□ -0.36
SDC2-201ENST00000302190 ASF1BQ9NVP2 202 aa12.8□□□□□ -0.36
SDC2-201ENST00000302190 ACAD8Q9UKU7 415 aa12.8□□□□□ -0.36
SDC2-201ENST00000302190 ABCA7Q8IZY2 2146 aa12.8□□□□□ -0.36
SDC2-201ENST00000302190 GPRIN2O60269 458 aa12.8□□□□□ -0.36
SDC2-201ENST00000302190 HOXD4P09016 255 aaPredicted RBP12.8□□□□□ -0.36
SDC2-201ENST00000302190 DIO1P49895 249 aa12.8□□□□□ -0.36
SDC2-201ENST00000302190 ZNF136P52737 540 aa12.8□□□□□ -0.36
SDC2-201ENST00000302190 BTG1P62324 171 aa12.8□□□□□ -0.36
SDC2-201ENST00000302190 FAM69AQ5T7M9 428 aa12.8□□□□□ -0.36
SDC2-201ENST00000302190 CA13Q8N1Q1 262 aa12.8□□□□□ -0.36
SDC2-201ENST00000302190 TMEM185AQ8NFB2 350 aa12.8□□□□□ -0.36
SDC2-201ENST00000302190 ISYNA1Q9NPH2 558 aa12.8□□□□□ -0.36
SDC2-201ENST00000302190 CD207Q9UJ71 328 aa12.8□□□□□ -0.36
SDC2-201ENST00000302190 SF3B6Q9Y3B4 125 aaKnown RBP12.8□□□□□ -0.36
SDC2-201ENST00000302190 SLC33A1O00400 549 aaPredicted RBP12.8□□□□□ -0.36
SDC2-201ENST00000302190 FARS2O95363 451 aaKnown RBP12.8□□□□□ -0.36
SDC2-201ENST00000302190 CD3DP04234 171 aa12.8□□□□□ -0.36
SDC2-201ENST00000302190 PGCP20142 388 aa12.8□□□□□ -0.36
SDC2-201ENST00000302190 HAAOP46952 286 aa12.8□□□□□ -0.36
SDC2-201ENST00000302190 FAM53BQ14153 422 aa12.8□□□□□ -0.36
SDC2-201ENST00000302190 MLC1Q15049 377 aa12.8□□□□□ -0.36
SDC2-201ENST00000302190 PRAMEF8Q5VWM4 474 aa12.8□□□□□ -0.36
SDC2-201ENST00000302190 C1QL3Q5VWW1 255 aa12.8□□□□□ -0.36
SDC2-201ENST00000302190 PRAMEF7Q5VXH5 474 aa12.8□□□□□ -0.36
SDC2-201ENST00000302190 B3GNTL1Q67FW5 361 aaPredicted RBP12.8□□□□□ -0.36
SDC2-201ENST00000302190 ZNF600Q6ZNG1 722 aa12.8□□□□□ -0.36
SDC2-201ENST00000302190 EMC7Q9NPA0 242 aa12.8□□□□□ -0.36
SDC2-201ENST00000302190 DTX4Q9Y2E6 619 aa12.8□□□□□ -0.36
SDC2-201ENST00000302190 TRAV20A0A0B4J274 112 aa12.79□□□□□ -0.36
SDC2-201ENST00000302190 TMEM235A6NFC5 223 aa12.79□□□□□ -0.36
SDC2-201ENST00000302190 OR5K4A6NMS3 321 aa12.79□□□□□ -0.36
SDC2-201ENST00000302190 ZNF726A6NNF4 738 aa12.79□□□□□ -0.36
SDC2-201ENST00000302190 PYCARD-AS1I3L0S3 204 aa12.79□□□□□ -0.36
SDC2-201ENST00000302190 UTS2O95399 124 aa12.79□□□□□ -0.36
SDC2-201ENST00000302190 TMIGD3P0DMS9 266 aaPredicted RBP12.79□□□□□ -0.36
SDC2-201ENST00000302190 TLE3Q04726 772 aa12.79□□□□□ -0.36
SDC2-201ENST00000302190 RPL18Q07020 188 aaKnown RBP12.79□□□□□ -0.36
SDC2-201ENST00000302190 SLC22A6Q4U2R8 563 aa12.79□□□□□ -0.36
SDC2-201ENST00000302190 BAIAP2L2Q6UXY1 529 aa12.79□□□□□ -0.36
SDC2-201ENST00000302190 DPY19L2P2Q6ZN68 376 aa12.79□□□□□ -0.36
SDC2-201ENST00000302190 DGAT2L6Q6ZPD8 337 aa12.79□□□□□ -0.36
SDC2-201ENST00000302190 NLRC3Q7RTR2 1065 aa12.79□□□□□ -0.36
SDC2-201ENST00000302190 BCORP1Q8N888 145 aa12.79□□□□□ -0.36
SDC2-201ENST00000302190 MOGAT1Q96PD6 335 aa12.79□□□□□ -0.36
SDC2-201ENST00000302190 ZIC2O95409 532 aaPredicted RBP12.79□□□□□ -0.36
SDC2-201ENST00000302190 ANKRD34CP0C6C1 535 aa12.79□□□□□ -0.36
SDC2-201ENST00000302190 GLI4P10075 376 aa12.79□□□□□ -0.36
SDC2-201ENST00000302190 RAB3AP20336 220 aa12.79□□□□□ -0.36
SDC2-201ENST00000302190 LAMTOR1Q6IAA8 161 aa12.79□□□□□ -0.36
SDC2-201ENST00000302190 MRM1Q6IN84 353 aaKnown RBP12.79□□□□□ -0.36
SDC2-201ENST00000302190 TSSK4Q6SA08 328 aa12.79□□□□□ -0.36
SDC2-201ENST00000302190 STAC2Q6ZMT1 411 aa12.79□□□□□ -0.36
SDC2-201ENST00000302190 ZNF454Q8N9F8 522 aa12.79□□□□□ -0.36
SDC2-201ENST00000302190 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.79□□□□□ -0.36
SDC2-201ENST00000302190 EDARQ9UNE0 448 aa12.79□□□□□ -0.36
SDC2-201ENST00000302190 P2RY10O00398 339 aa12.79□□□□□ -0.36
SDC2-201ENST00000302190 BHLHE40O14503 412 aa12.79□□□□□ -0.36
SDC2-201ENST00000302190 GLCEO94923 617 aa12.79□□□□□ -0.36
SDC2-201ENST00000302190 THY1P04216 161 aa12.79□□□□□ -0.36
SDC2-201ENST00000302190 AKAIN1P0CW23 69 aa12.79□□□□□ -0.36
SDC2-201ENST00000302190 RABIFP47224 123 aa12.79□□□□□ -0.36
SDC2-201ENST00000302190 CSNK1EP49674 416 aaKnown RBP12.79□□□□□ -0.36
SDC2-201ENST00000302190 SNU13P55769 128 aaKnown RBP12.79□□□□□ -0.36
SDC2-201ENST00000302190 SNRPNP63162 240 aaKnown RBP12.79□□□□□ -0.36
SDC2-201ENST00000302190 ELOCQ15369 112 aa12.79□□□□□ -0.36
SDC2-201ENST00000302190 SWI5Q1ZZU3 235 aa12.79□□□□□ -0.36
SDC2-201ENST00000302190 FAM209BQ5JX69 171 aa12.79□□□□□ -0.36
SDC2-201ENST00000302190 AWAT2Q6E213 333 aa12.79□□□□□ -0.36
SDC2-201ENST00000302190 ALKBH2Q6NS38 261 aa12.79□□□□□ -0.36
SDC2-201ENST00000302190 TEX19Q8NA77 164 aa12.79□□□□□ -0.36
SDC2-201ENST00000302190 DUSP18Q8NEJ0 188 aa12.79□□□□□ -0.36
SDC2-201ENST00000302190 BAHD1Q8TBE0 780 aaPredicted RBP12.79□□□□□ -0.36
SDC2-201ENST00000302190 FAM3DQ96BQ1 224 aa12.79□□□□□ -0.36
SDC2-201ENST00000302190 ST6GALNAC5Q9BVH7 336 aa12.79□□□□□ -0.36
SDC2-201ENST00000302190 MS4A7Q9GZW8 240 aaPredicted RBP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms