RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 TRILQ7L0X0 811 aa7.57□□□□□ -1.2
PTPDC1-201ENST00000288976 MAMDC2Q7Z304 686 aaPredicted RBP7.57□□□□□ -1.2
PTPDC1-201ENST00000288976 FTMTQ8N4E7 242 aa7.57□□□□□ -1.2
PTPDC1-201ENST00000288976 TMEM251Q8N6I4 163 aa7.57□□□□□ -1.2
PTPDC1-201ENST00000288976 ZNF565Q8N9K5 539 aa7.57□□□□□ -1.2
PTPDC1-201ENST00000288976 MCFD2Q8NI22 146 aa7.57□□□□□ -1.2
PTPDC1-201ENST00000288976 FANK1Q8TC84 345 aa7.57□□□□□ -1.2
PTPDC1-201ENST00000288976 FAM46AQ96IP4 442 aaKnown RBP7.57□□□□□ -1.2
PTPDC1-201ENST00000288976 FAM71F1Q96KD3 344 aaPredicted RBP7.57□□□□□ -1.2
PTPDC1-201ENST00000288976 ANKRD60Q9BZ19 345 aa7.57□□□□□ -1.2
PTPDC1-201ENST00000288976 OBP2BQ9NPH6 170 aa7.57□□□□□ -1.2
PTPDC1-201ENST00000288976 IL20Q9NYY1 176 aa7.57□□□□□ -1.2
PTPDC1-201ENST00000288976 B3GNT3Q9Y2A9 372 aa7.57□□□□□ -1.2
PTPDC1-201ENST00000288976 AQP7O14520 342 aa7.57□□□□□ -1.2
PTPDC1-201ENST00000288976 CNOT4O95628 575 aaKnown RBP7.57□□□□□ -1.2
PTPDC1-201ENST00000288976 RAB36O95755 333 aa7.57□□□□□ -1.2
PTPDC1-201ENST00000288976 TACSTD2P09758 323 aa7.57□□□□□ -1.2
PTPDC1-201ENST00000288976 GABRA2P47869 451 aa7.57□□□□□ -1.2
PTPDC1-201ENST00000288976 CTXN1P60606 82 aa7.57□□□□□ -1.2
PTPDC1-201ENST00000288976 SYT14P1Q58G82 188 aa7.57□□□□□ -1.2
PTPDC1-201ENST00000288976 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.57□□□□□ -1.2
PTPDC1-201ENST00000288976 ASCC1Q8N9N2 400 aaKnown RBP7.57□□□□□ -1.2
PTPDC1-201ENST00000288976 OR4K13Q8NH42 304 aa7.57□□□□□ -1.2
PTPDC1-201ENST00000288976 TFAP2CQ92754 450 aa7.57□□□□□ -1.2
PTPDC1-201ENST00000288976 MIB2Q96AX9 1013 aa7.57□□□□□ -1.2
PTPDC1-201ENST00000288976 COG8Q96MW5 612 aa7.57□□□□□ -1.2
PTPDC1-201ENST00000288976 NIPSNAP1Q9BPW8 284 aa7.57□□□□□ -1.2
PTPDC1-201ENST00000288976 ENKD1Q9H0I2 346 aa7.57□□□□□ -1.2
PTPDC1-201ENST00000288976 ZNF442Q9H7R0 627 aa7.57□□□□□ -1.2
PTPDC1-201ENST00000288976 HIF3AQ9Y2N7 669 aa7.57□□□□□ -1.2
PTPDC1-201ENST00000288976 KIAA1549Q9HCM3 1950 aa7.57□□□□□ -1.2
PTPDC1-201ENST00000288976 LOC102725191A0A1B0GVB3 256 aa7.56□□□□□ -1.2
PTPDC1-201ENST00000288976 LIPT2A6NK58 231 aa7.56□□□□□ -1.2
PTPDC1-201ENST00000288976 C17orf51A8MQB3 221 aa7.56□□□□□ -1.2
PTPDC1-201ENST00000288976 ZNF879B4DU55 563 aa7.56□□□□□ -1.2
PTPDC1-201ENST00000288976 MPZL2O60487 215 aa7.56□□□□□ -1.2
PTPDC1-201ENST00000288976 MAKP20794 623 aa7.56□□□□□ -1.2
PTPDC1-201ENST00000288976 GPR4P46093 362 aa7.56□□□□□ -1.2
PTPDC1-201ENST00000288976 SLC35A1P78382 337 aa7.56□□□□□ -1.2
PTPDC1-201ENST00000288976 ZBED5Q49AG3 693 aa7.56□□□□□ -1.2
PTPDC1-201ENST00000288976 IDNKQ5T6J7 187 aa7.56□□□□□ -1.2
PTPDC1-201ENST00000288976 FAM131AQ6UXB0 335 aa7.56□□□□□ -1.2
PTPDC1-201ENST00000288976 WFDC8Q8IUA0 241 aa7.56□□□□□ -1.2
PTPDC1-201ENST00000288976 HS3ST5Q8IZT8 346 aa7.56□□□□□ -1.2
PTPDC1-201ENST00000288976 SLC25A44Q96H78 314 aaPredicted RBP7.56□□□□□ -1.2
PTPDC1-201ENST00000288976 ADGRG7Q96K78 797 aa7.56□□□□□ -1.2
PTPDC1-201ENST00000288976 HRASLS5Q96KN8 279 aa7.56□□□□□ -1.2
PTPDC1-201ENST00000288976 KLHL15Q96M94 604 aa7.56□□□□□ -1.2
PTPDC1-201ENST00000288976 GNRHR2Q96P88 292 aa7.56□□□□□ -1.2
PTPDC1-201ENST00000288976 SNX18Q96RF0 628 aa7.56□□□□□ -1.2
PTPDC1-201ENST00000288976 KLHDC3Q9BQ90 382 aa7.56□□□□□ -1.2
PTPDC1-201ENST00000288976 ZNF355PQ9NSJ1 428 aa7.56□□□□□ -1.2
PTPDC1-201ENST00000288976 ZNF226Q9NYT6 803 aa7.56□□□□□ -1.2
PTPDC1-201ENST00000288976 VSX1Q9NZR4 365 aaPredicted RBP7.56□□□□□ -1.2
PTPDC1-201ENST00000288976 FKBP7Q9Y680 259 aa7.56□□□□□ -1.2
PTPDC1-201ENST00000288976 ZAR1LA6NP61 321 aa7.56□□□□□ -1.2
PTPDC1-201ENST00000288976 ERVH48-1M5A8F1 160 aa7.56□□□□□ -1.2
PTPDC1-201ENST00000288976 EIF1BO60739 113 aaKnown RBP7.56□□□□□ -1.2
PTPDC1-201ENST00000288976 APEHP13798 732 aaKnown RBP7.56□□□□□ -1.2
PTPDC1-201ENST00000288976 CRISP1P54107 249 aa7.56□□□□□ -1.2
PTPDC1-201ENST00000288976 FHL1Q13642 323 aa7.56□□□□□ -1.2
PTPDC1-201ENST00000288976 FAM205BPQ63HN1 556 aa7.56□□□□□ -1.2
PTPDC1-201ENST00000288976 GFRALQ6UXV0 394 aa7.56□□□□□ -1.2
PTPDC1-201ENST00000288976 ESPNLQ6ZVH7 1005 aa7.56□□□□□ -1.2
PTPDC1-201ENST00000288976 MRPL21Q7Z2W9 205 aaKnown RBP7.56□□□□□ -1.2
PTPDC1-201ENST00000288976 NEIL3Q8TAT5 605 aa7.56□□□□□ -1.2
PTPDC1-201ENST00000288976 GCDHQ92947 438 aaPredicted RBP7.56□□□□□ -1.2
PTPDC1-201ENST00000288976 TAAR8Q969N4 342 aa7.56□□□□□ -1.2
PTPDC1-201ENST00000288976 ABHD17AQ96GS6 310 aa7.56□□□□□ -1.2
PTPDC1-201ENST00000288976 MROQ9BYG7 248 aa7.56□□□□□ -1.2
PTPDC1-201ENST00000288976 TOR3AQ9H497 397 aa7.56□□□□□ -1.2
PTPDC1-201ENST00000288976 NARFLQ9H6Q4 476 aa7.56□□□□□ -1.2
PTPDC1-201ENST00000288976 SMURF2Q9HAU4 748 aa7.56□□□□□ -1.2
PTPDC1-201ENST00000288976 NDRG4Q9ULP0 352 aaKnown RBP7.56□□□□□ -1.2
PTPDC1-201ENST00000288976 TP53TG5Q9Y2B4 290 aa7.56□□□□□ -1.2
PTPDC1-201ENST00000288976 HIVEP2P31629 2446 aa7.56□□□□□ -1.2
PTPDC1-201ENST00000288976 TEX13DA0A0J9YY54 714 aaPredicted RBP7.56□□□□□ -1.2
PTPDC1-201ENST00000288976 OR2M5A3KFT3 312 aa7.56□□□□□ -1.2
PTPDC1-201ENST00000288976 RFPL3SP0C7P2 107 aa7.56□□□□□ -1.2
PTPDC1-201ENST00000288976 TMEM225BP0DP42 221 aa7.56□□□□□ -1.2
PTPDC1-201ENST00000288976 ZNF708P17019 499 aa7.56□□□□□ -1.2
PTPDC1-201ENST00000288976 GADD45AP24522 165 aa7.56□□□□□ -1.2
PTPDC1-201ENST00000288976 CDK5Q00535 292 aa7.56□□□□□ -1.2
PTPDC1-201ENST00000288976 INPP5JQ15735 1006 aaPredicted RBP7.56□□□□□ -1.2
PTPDC1-201ENST00000288976 OCLNQ16625 522 aa7.56□□□□□ -1.2
PTPDC1-201ENST00000288976 EMC4Q5J8M3 183 aa7.56□□□□□ -1.2
PTPDC1-201ENST00000288976 C12orf73Q69YU5 71 aa7.56□□□□□ -1.2
PTPDC1-201ENST00000288976 C19orf48Q6RUI8 117 aa7.56□□□□□ -1.2
PTPDC1-201ENST00000288976 LINGO2Q7L985 606 aa7.56□□□□□ -1.2
PTPDC1-201ENST00000288976 DEFB108BQ8NET1 73 aa7.56□□□□□ -1.2
PTPDC1-201ENST00000288976 OR5J2Q8NH18 312 aa7.56□□□□□ -1.2
PTPDC1-201ENST00000288976 FBLIM1Q8WUP2 373 aa7.56□□□□□ -1.2
PTPDC1-201ENST00000288976 UCN2Q96RP3 112 aa7.56□□□□□ -1.2
PTPDC1-201ENST00000288976 C20orf141Q9NUB4 165 aa7.56□□□□□ -1.2
PTPDC1-201ENST00000288976 FAM118AQ9NWS6 357 aa7.56□□□□□ -1.2
PTPDC1-201ENST00000288976 OR14J1Q9UGF5 321 aa7.56□□□□□ -1.2
PTPDC1-201ENST00000288976 LHX6Q9UPM6 363 aa7.56□□□□□ -1.2
PTPDC1-201ENST00000288976 SIGLEC7Q9Y286 467 aa7.56□□□□□ -1.2
PTPDC1-201ENST00000288976 MAGED1Q9Y5V3 778 aaPredicted RBP7.56□□□□□ -1.2
PTPDC1-201ENST00000288976 SCGB1D2O95969 90 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms