RNA–Protein interactions for RNA: ENST00000288602.10

BRAF-201, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAF, Length 2,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-201ENST00000288602 MAS1P04201 325 aa17.31■□□□□ 0.36
BRAF-201ENST00000288602 KLK3P07288 261 aaPredicted RBP17.31■□□□□ 0.36
BRAF-201ENST00000288602 SDHBP21912 280 aa17.31■□□□□ 0.36
BRAF-201ENST00000288602 AGFG1P52594 562 aaKnown RBP17.31■□□□□ 0.36
BRAF-201ENST00000288602 STAC2Q6ZMT1 411 aa17.31■□□□□ 0.36
BRAF-201ENST00000288602 TMEM105Q8N8V8 129 aa17.31■□□□□ 0.36
BRAF-201ENST00000288602 GCDHQ92947 438 aaPredicted RBP17.31■□□□□ 0.36
BRAF-201ENST00000288602 DDIT4LQ96D03 193 aa17.31■□□□□ 0.36
BRAF-201ENST00000288602 C5orf34Q96MH7 638 aa17.31■□□□□ 0.36
BRAF-201ENST00000288602 ABRACLQ9P1F3 81 aa17.31■□□□□ 0.36
BRAF-201ENST00000288602 SLC22A13Q9Y226 551 aa17.31■□□□□ 0.36
BRAF-201ENST00000288602 IFITM5A6NNB3 132 aa17.3■□□□□ 0.36
BRAF-201ENST00000288602 PNPP00491 289 aa17.3■□□□□ 0.36
BRAF-201ENST00000288602 NAGAP17050 411 aa17.3■□□□□ 0.36
BRAF-201ENST00000288602 ADRA2CP18825 462 aa17.3■□□□□ 0.36
BRAF-201ENST00000288602 KIR3DL2P43630 455 aa17.3■□□□□ 0.36
BRAF-201ENST00000288602 DGCR2P98153 550 aa17.3■□□□□ 0.36
BRAF-201ENST00000288602 ZFP36L1Q07352 338 aaKnown RBP17.3■□□□□ 0.36
BRAF-201ENST00000288602 GPR176Q14439 515 aa17.3■□□□□ 0.36
BRAF-201ENST00000288602 PLPPR5Q32ZL2 321 aa17.3■□□□□ 0.36
BRAF-201ENST00000288602 WDR38Q5JTN6 314 aa17.3■□□□□ 0.36
BRAF-201ENST00000288602 ATAD3CQ5T2N8 411 aa17.3■□□□□ 0.36
BRAF-201ENST00000288602 H1FNTQ75WM6 255 aaPredicted RBP17.3■□□□□ 0.36
BRAF-201ENST00000288602 MFSD8Q8NHS3 518 aa17.3■□□□□ 0.36
BRAF-201ENST00000288602 SLC22A8Q8TCC7 542 aa17.3■□□□□ 0.36
BRAF-201ENST00000288602 ELP5Q8TE02 316 aa17.3■□□□□ 0.36
BRAF-201ENST00000288602 SPACA9Q96E40 222 aaPredicted RBP17.3■□□□□ 0.36
BRAF-201ENST00000288602 LIN7BQ9HAP6 207 aa17.3■□□□□ 0.36
BRAF-201ENST00000288602 TCF7L1Q9HCS4 588 aa17.3■□□□□ 0.36
BRAF-201ENST00000288602 SPATA2Q9UM82 520 aa17.3■□□□□ 0.36
BRAF-201ENST00000288602 CNTRLQ7Z7A1 2325 aa17.3■□□□□ 0.36
BRAF-201ENST00000288602 TRAV8-7A0A075B6U6 113 aa17.3■□□□□ 0.36
BRAF-201ENST00000288602 A0A1W2PNR3 127 aa17.3■□□□□ 0.36
BRAF-201ENST00000288602 NPIPA5E9PKD4 350 aa17.3■□□□□ 0.36
BRAF-201ENST00000288602 IGHMP01871 453 aa17.3■□□□□ 0.36
BRAF-201ENST00000288602 FBXO45P0C2W1 286 aa17.3■□□□□ 0.36
BRAF-201ENST00000288602 DDOSTP39656 456 aa17.3■□□□□ 0.36
BRAF-201ENST00000288602 TBRG1Q3YBR2 411 aa17.3■□□□□ 0.36
BRAF-201ENST00000288602 OR7E24Q6IFN5 339 aa17.3■□□□□ 0.36
BRAF-201ENST00000288602 PYHIN1Q6K0P9 492 aa17.3■□□□□ 0.36
BRAF-201ENST00000288602 FAM198BQ6UWH4 519 aa17.3■□□□□ 0.36
BRAF-201ENST00000288602 FCRLAQ7L513 359 aa17.3■□□□□ 0.36
BRAF-201ENST00000288602 CMTM4Q8IZR5 234 aa17.3■□□□□ 0.36
BRAF-201ENST00000288602 RNF138Q8WVD3 245 aa17.3■□□□□ 0.36
BRAF-201ENST00000288602 ASB10Q8WXI3 467 aa17.3■□□□□ 0.36
BRAF-201ENST00000288602 TMEM106AQ96A25 262 aa17.3■□□□□ 0.36
BRAF-201ENST00000288602 NPAP1Q9NZP6 1156 aa17.3■□□□□ 0.36
BRAF-201ENST00000288602 NPIPA1Q9UND3 350 aa17.3■□□□□ 0.36
BRAF-201ENST00000288602 GPR179Q6PRD1 2367 aa17.3■□□□□ 0.36
BRAF-201ENST00000288602 TRABD2BA6NFA1 517 aa17.29■□□□□ 0.36
BRAF-201ENST00000288602 KLF7O75840 302 aaPredicted RBP17.29■□□□□ 0.36
BRAF-201ENST00000288602 ZNF24P17028 368 aa17.29■□□□□ 0.36
BRAF-201ENST00000288602 SUMO3P55854 103 aaPredicted RBP17.29■□□□□ 0.36
BRAF-201ENST00000288602 MYBPHQ13203 477 aa17.29■□□□□ 0.36
BRAF-201ENST00000288602 EIF2B1Q14232 305 aaKnown RBP17.29■□□□□ 0.36
BRAF-201ENST00000288602 NTRK2Q16620 822 aa17.29■□□□□ 0.36
BRAF-201ENST00000288602 TATDN3Q17R31 274 aa17.29■□□□□ 0.36
BRAF-201ENST00000288602 SLC23A3Q6PIS1 610 aa17.29■□□□□ 0.36
BRAF-201ENST00000288602 C5orf46Q6UWT4 87 aa17.29■□□□□ 0.36
BRAF-201ENST00000288602 LINC00346Q8IVM7 164 aa17.29■□□□□ 0.36
BRAF-201ENST00000288602 SLC7A5P1Q8MH63 180 aa17.29■□□□□ 0.36
BRAF-201ENST00000288602 OR8B4Q96RC9 309 aa17.29■□□□□ 0.36
BRAF-201ENST00000288602 ABCG5Q9H222 651 aa17.29■□□□□ 0.36
BRAF-201ENST00000288602 V9GY05 133 aa17.29■□□□□ 0.36
BRAF-201ENST00000288602 IGHV1-45A0A0A0MS14 117 aa17.29■□□□□ 0.36
BRAF-201ENST00000288602 LIPT2A6NK58 231 aa17.29■□□□□ 0.36
BRAF-201ENST00000288602 H0YC42 278 aa17.29■□□□□ 0.36
BRAF-201ENST00000288602 SLC17A1Q14916 467 aa17.29■□□□□ 0.36
BRAF-201ENST00000288602 DUSP18Q8NEJ0 188 aa17.29■□□□□ 0.36
BRAF-201ENST00000288602 ST6GAL2Q96JF0 529 aa17.29■□□□□ 0.36
BRAF-201ENST00000288602 NKX3-1Q99801 234 aaPredicted RBP17.29■□□□□ 0.36
BRAF-201ENST00000288602 COMMD4Q9H0A8 199 aa17.29■□□□□ 0.36
BRAF-201ENST00000288602 CHST11Q9NPF2 352 aa17.29■□□□□ 0.36
BRAF-201ENST00000288602 ZNF221Q9UK13 617 aa17.29■□□□□ 0.36
BRAF-201ENST00000288602 PCDHGA9Q9Y5G4 932 aaKnown RBP17.29■□□□□ 0.36
BRAF-201ENST00000288602 BDP1A6H8Y1 2624 aa17.29■□□□□ 0.36
BRAF-201ENST00000288602 NCOR1O75376 2440 aa17.29■□□□□ 0.36
BRAF-201ENST00000288602 AIPO00170 330 aa17.28■□□□□ 0.36
BRAF-201ENST00000288602 DUSP3P51452 185 aaPredicted RBP17.28■□□□□ 0.36
BRAF-201ENST00000288602 HSF1Q00613 529 aa17.28■□□□□ 0.36
BRAF-201ENST00000288602 GLO1Q04760 184 aa17.28■□□□□ 0.36
BRAF-201ENST00000288602 MFGE8Q08431 387 aaPredicted RBP17.28■□□□□ 0.36
BRAF-201ENST00000288602 SLC18B1Q6NT16 456 aa17.28■□□□□ 0.36
BRAF-201ENST00000288602 KRT77Q7Z794 578 aa17.28■□□□□ 0.36
BRAF-201ENST00000288602 WDSUB1Q8N9V3 476 aa17.28■□□□□ 0.36
BRAF-201ENST00000288602 PHYHIPQ92561 330 aa17.28■□□□□ 0.36
BRAF-201ENST00000288602 C4orf45Q96LM5 186 aa17.28■□□□□ 0.36
BRAF-201ENST00000288602 DCBLD2Q96PD2 775 aa17.28■□□□□ 0.36
BRAF-201ENST00000288602 MNTQ99583 582 aa17.28■□□□□ 0.36
BRAF-201ENST00000288602 ABHD6Q9BV23 337 aa17.28■□□□□ 0.36
BRAF-201ENST00000288602 WDR54Q9H977 334 aa17.28■□□□□ 0.36
BRAF-201ENST00000288602 TRBV5-5A0A0J9YX44 114 aa17.28■□□□□ 0.36
BRAF-201ENST00000288602 DKK1O94907 266 aa17.28■□□□□ 0.36
BRAF-201ENST00000288602 CLDN6P56747 220 aa17.28■□□□□ 0.36
BRAF-201ENST00000288602 ZNF679Q8IYX0 411 aa17.28■□□□□ 0.36
BRAF-201ENST00000288602 ZC3HAV1LQ96H79 300 aaKnown RBP17.28■□□□□ 0.36
BRAF-201ENST00000288602 RPH3AQ9Y2J0 694 aaPredicted RBP17.28■□□□□ 0.36
BRAF-201ENST00000288602 HS3ST3B1Q9Y662 390 aa17.28■□□□□ 0.36
BRAF-201ENST00000288602 CHCHD2Q9Y6H1 151 aaPredicted RBP17.28■□□□□ 0.36
BRAF-201ENST00000288602 G3V3Y1 287 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms