RNA–Protein interactions for RNA: ENST00000271628.8

SF3B4-201, Transcript of splicing factor 3b subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B4, Length 2,085 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B4-201ENST00000271628 CPAMD8Q8IZJ3 1885 aa13.76□□□□□ -0.21
SF3B4-201ENST00000271628 FAM25AB3EWG3 89 aa13.75□□□□□ -0.21
SF3B4-201ENST00000271628 FAM25CB3EWG5 89 aa13.75□□□□□ -0.21
SF3B4-201ENST00000271628 FAM25GB3EWG6 89 aa13.75□□□□□ -0.21
SF3B4-201ENST00000271628 C21orf140B9A014 251 aa13.75□□□□□ -0.21
SF3B4-201ENST00000271628 EFNA2O43921 213 aa13.75□□□□□ -0.21
SF3B4-201ENST00000271628 NCR1O76036 304 aa13.75□□□□□ -0.21
SF3B4-201ENST00000271628 FAM157BP0CG42 384 aa13.75□□□□□ -0.21
SF3B4-201ENST00000271628 EDNRAP25101 427 aa13.75□□□□□ -0.21
SF3B4-201ENST00000271628 INPP1P49441 399 aa13.75□□□□□ -0.21
SF3B4-201ENST00000271628 GDI2P50395 445 aaKnown RBP13.75□□□□□ -0.21
SF3B4-201ENST00000271628 EGR3Q06889 387 aa13.75□□□□□ -0.21
SF3B4-201ENST00000271628 SPEM2Q0P670 501 aa13.75□□□□□ -0.21
SF3B4-201ENST00000271628 TATDN3Q17R31 274 aa13.75□□□□□ -0.21
SF3B4-201ENST00000271628 ACSM3Q53FZ2 586 aa13.75□□□□□ -0.21
SF3B4-201ENST00000271628 ZNF684Q5T5D7 378 aa13.75□□□□□ -0.21
SF3B4-201ENST00000271628 UBE2J2Q8N2K1 259 aa13.75□□□□□ -0.21
SF3B4-201ENST00000271628 C5orf34Q96MH7 638 aa13.75□□□□□ -0.21
SF3B4-201ENST00000271628 TMEM246Q9BRR3 403 aa13.75□□□□□ -0.21
SF3B4-201ENST00000271628 TTYH2Q9BSA4 534 aa13.75□□□□□ -0.21
SF3B4-201ENST00000271628 MARVELD1Q9BSK0 173 aa13.75□□□□□ -0.21
SF3B4-201ENST00000271628 SH2D2AQ9NP31 389 aa13.75□□□□□ -0.21
SF3B4-201ENST00000271628 ACOXLQ9NUZ1 547 aa13.75□□□□□ -0.21
SF3B4-201ENST00000271628 PAQR5Q9NXK6 330 aaPredicted RBP13.75□□□□□ -0.21
SF3B4-201ENST00000271628 SLC22A23A1A5C7 686 aa13.75□□□□□ -0.21
SF3B4-201ENST00000271628 HSPB2A8KAH6 182 aa13.75□□□□□ -0.21
SF3B4-201ENST00000271628 SHISA8B8ZZ34 492 aa13.75□□□□□ -0.21
SF3B4-201ENST00000271628 NPIPA5E9PKD4 350 aa13.75□□□□□ -0.21
SF3B4-201ENST00000271628 MAGEB4O15481 346 aaPredicted RBP13.75□□□□□ -0.21
SF3B4-201ENST00000271628 SLC16A7O60669 478 aa13.75□□□□□ -0.21
SF3B4-201ENST00000271628 GATBO75879 557 aaKnown RBP13.75□□□□□ -0.21
SF3B4-201ENST00000271628 IL11P20809 199 aa13.75□□□□□ -0.21
SF3B4-201ENST00000271628 MYBPHQ13203 477 aa13.75□□□□□ -0.21
SF3B4-201ENST00000271628 HSPB2Q16082 182 aa13.75□□□□□ -0.21
SF3B4-201ENST00000271628 HBMQ6B0K9 141 aa13.75□□□□□ -0.21
SF3B4-201ENST00000271628 DNM1P34Q6PK57 102 aa13.75□□□□□ -0.21
SF3B4-201ENST00000271628 TRILQ7L0X0 811 aa13.75□□□□□ -0.21
SF3B4-201ENST00000271628 LRRC28Q86X40 367 aaPredicted RBP13.75□□□□□ -0.21
SF3B4-201ENST00000271628 SUMF1Q8NBK3 374 aa13.75□□□□□ -0.21
SF3B4-201ENST00000271628 ADPRHL1Q8NDY3 354 aa13.75□□□□□ -0.21
SF3B4-201ENST00000271628 OR6N2Q8NGY6 317 aa13.75□□□□□ -0.21
SF3B4-201ENST00000271628 FYTTD1Q96QD9 318 aaKnown RBP13.75□□□□□ -0.21
SF3B4-201ENST00000271628 TRAF4Q9BUZ4 470 aaPredicted RBP13.75□□□□□ -0.21
SF3B4-201ENST00000271628 NPIPA1Q9UND3 350 aa13.75□□□□□ -0.21
SF3B4-201ENST00000271628 RPH3AQ9Y2J0 694 aaPredicted RBP13.75□□□□□ -0.21
SF3B4-201ENST00000271628 HDGFL3Q9Y3E1 203 aa13.75□□□□□ -0.21
SF3B4-201ENST00000271628 A0A1W2PNV4 684 aa13.74□□□□□ -0.21
SF3B4-201ENST00000271628 PMS2P1A4D2B8 440 aa13.74□□□□□ -0.21
SF3B4-201ENST00000271628 TVP23AA6NH52 213 aa13.74□□□□□ -0.21
SF3B4-201ENST00000271628 SLC43A1O75387 559 aa13.74□□□□□ -0.21
SF3B4-201ENST00000271628 ARL6IP5O75915 188 aa13.74□□□□□ -0.21
SF3B4-201ENST00000271628 HLA-DQA2P01906 255 aa13.74□□□□□ -0.21
SF3B4-201ENST00000271628 CCL3P10147 92 aa13.74□□□□□ -0.21
SF3B4-201ENST00000271628 ALOX5APP20292 161 aa13.74□□□□□ -0.21
SF3B4-201ENST00000271628 ERP29P30040 261 aaKnown RBP13.74□□□□□ -0.21
SF3B4-201ENST00000271628 DSCR4P56555 118 aaPredicted RBP13.74□□□□□ -0.21
SF3B4-201ENST00000271628 CLDN6P56747 220 aa13.74□□□□□ -0.21
SF3B4-201ENST00000271628 CLDN20P56880 219 aa13.74□□□□□ -0.21
SF3B4-201ENST00000271628 H3F3CQ6NXT2 135 aa13.74□□□□□ -0.21
SF3B4-201ENST00000271628 KDM8Q8N371 416 aa13.74□□□□□ -0.21
SF3B4-201ENST00000271628 OR1J4Q8NGS1 313 aa13.74□□□□□ -0.21
SF3B4-201ENST00000271628 GRPEL2Q8TAA5 225 aa13.74□□□□□ -0.21
SF3B4-201ENST00000271628 PHYHIPQ92561 330 aa13.74□□□□□ -0.21
SF3B4-201ENST00000271628 NTNG2Q96CW9 530 aa13.74□□□□□ -0.21
SF3B4-201ENST00000271628 B3GAT2Q9NPZ5 323 aa13.74□□□□□ -0.21
SF3B4-201ENST00000271628 MALT1Q9UDY8 824 aa13.74□□□□□ -0.21
SF3B4-201ENST00000271628 GPR179Q6PRD1 2367 aa13.74□□□□□ -0.21
SF3B4-201ENST00000271628 ORC5O43913 435 aa13.73□□□□□ -0.21
SF3B4-201ENST00000271628 SERPINA7P05543 415 aa13.73□□□□□ -0.21
SF3B4-201ENST00000271628 HLA-DOBP13765 273 aa13.73□□□□□ -0.21
SF3B4-201ENST00000271628 HSF1Q00613 529 aa13.73□□□□□ -0.21
SF3B4-201ENST00000271628 CD83Q01151 205 aa13.73□□□□□ -0.21
SF3B4-201ENST00000271628 GLO1Q04760 184 aa13.73□□□□□ -0.21
SF3B4-201ENST00000271628 MELKQ14680 651 aa13.73□□□□□ -0.21
SF3B4-201ENST00000271628 DHRS13Q6UX07 377 aa13.73□□□□□ -0.21
SF3B4-201ENST00000271628 UTS2BQ765I0 119 aa13.73□□□□□ -0.21
SF3B4-201ENST00000271628 SLC35D2Q76EJ3 337 aa13.73□□□□□ -0.21
SF3B4-201ENST00000271628 DPY19L4Q7Z388 723 aa13.73□□□□□ -0.21
SF3B4-201ENST00000271628 GTPBP8Q8N3Z3 284 aaPredicted RBP13.73□□□□□ -0.21
SF3B4-201ENST00000271628 NLGN4YQ8NFZ3 816 aaPredicted RBP13.73□□□□□ -0.21
SF3B4-201ENST00000271628 ASB10Q8WXI3 467 aa13.73□□□□□ -0.21
SF3B4-201ENST00000271628 CYSLTR2Q9NS75 346 aa13.73□□□□□ -0.21
SF3B4-201ENST00000271628 P4HTMQ9NXG6 502 aa13.73□□□□□ -0.21
SF3B4-201ENST00000271628 CBR3O75828 277 aa13.73□□□□□ -0.21
SF3B4-201ENST00000271628 AKR7A3O95154 331 aa13.73□□□□□ -0.21
SF3B4-201ENST00000271628 IFNGR1P15260 489 aa13.73□□□□□ -0.21
SF3B4-201ENST00000271628 ELK1P19419 428 aa13.73□□□□□ -0.21
SF3B4-201ENST00000271628 SHC1P29353 583 aa13.73□□□□□ -0.21
SF3B4-201ENST00000271628 TALDO1P37837 337 aa13.73□□□□□ -0.21
SF3B4-201ENST00000271628 POU3F1Q03052 451 aaPredicted RBP13.73□□□□□ -0.21
SF3B4-201ENST00000271628 TRIP6Q15654 476 aaKnown RBP13.73□□□□□ -0.21
SF3B4-201ENST00000271628 YIF1BQ5BJH7 314 aa13.73□□□□□ -0.21
SF3B4-201ENST00000271628 OTOSQ8NHW6 89 aa13.73□□□□□ -0.21
SF3B4-201ENST00000271628 RPS4Y2Q8TD47 263 aa13.73□□□□□ -0.21
SF3B4-201ENST00000271628 THEM6Q8WUY1 208 aa13.73□□□□□ -0.21
SF3B4-201ENST00000271628 ASB17Q8WXJ9 295 aa13.73□□□□□ -0.21
SF3B4-201ENST00000271628 TMEM41AQ96HV5 264 aa13.73□□□□□ -0.21
SF3B4-201ENST00000271628 PROK2Q9HC23 129 aa13.73□□□□□ -0.21
SF3B4-201ENST00000271628 FOXJ2Q9P0K8 574 aa13.73□□□□□ -0.21
SF3B4-201ENST00000271628 NLKQ9UBE8 527 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms