RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 CLEC1AQ8NC01 280 aa24.9■■□□□ 1.58
CBX4-201ENST00000269397 PXT1Q8NFP0 134 aa24.9■■□□□ 1.58
CBX4-201ENST00000269397 BMFQ96LC9 184 aa24.9■■□□□ 1.58
CBX4-201ENST00000269397 TSPAN32Q96QS1 320 aa24.9■■□□□ 1.58
CBX4-201ENST00000269397 PCOLCE2Q9UKZ9 415 aa24.9■■□□□ 1.58
CBX4-201ENST00000269397 SNAPC5O75971 98 aa24.89■■□□□ 1.58
CBX4-201ENST00000269397 RPA2P15927 270 aa24.89■■□□□ 1.58
CBX4-201ENST00000269397 ALOX5APP20292 161 aa24.89■■□□□ 1.58
CBX4-201ENST00000269397 TMEM196Q5HYL7 178 aa24.89■■□□□ 1.58
CBX4-201ENST00000269397 LY6G6FQ5SQ64 297 aa24.89■■□□□ 1.58
CBX4-201ENST00000269397 MARC2Q969Z3 335 aa24.89■■□□□ 1.58
CBX4-201ENST00000269397 SLC25A28Q96A46 364 aa24.89■■□□□ 1.58
CBX4-201ENST00000269397 KTI12Q96EK9 354 aaPredicted RBP24.89■■□□□ 1.58
CBX4-201ENST00000269397 PCP4L1A6NKN8 68 aa24.89■■□□□ 1.58
CBX4-201ENST00000269397 C2orf74A8MZ97 194 aa24.89■■□□□ 1.58
CBX4-201ENST00000269397 K7EQS6 105 aa24.89■■□□□ 1.58
CBX4-201ENST00000269397 OR4E1P0C645 316 aa24.89■■□□□ 1.58
CBX4-201ENST00000269397 GDI1P31150 447 aa24.89■■□□□ 1.58
CBX4-201ENST00000269397 CENPAP49450 140 aa24.89■■□□□ 1.58
CBX4-201ENST00000269397 EGR4Q05215 589 aa24.89■■□□□ 1.58
CBX4-201ENST00000269397 RPP25Q9BUL9 199 aaKnown RBP24.89■■□□□ 1.58
CBX4-201ENST00000269397 G6PC3Q9BUM1 346 aa24.89■■□□□ 1.58
CBX4-201ENST00000269397 PTDSS2Q9BVG9 487 aa24.89■■□□□ 1.58
CBX4-201ENST00000269397 TINAGL1Q9GZM7 467 aaPredicted RBP24.89■■□□□ 1.58
CBX4-201ENST00000269397 CRISPLD2Q9H0B8 497 aa24.89■■□□□ 1.58
CBX4-201ENST00000269397 MMP25Q9NPA2 562 aa24.89■■□□□ 1.58
CBX4-201ENST00000269397 FAM74A7A6NL05 159 aa24.89■■□□□ 1.57
CBX4-201ENST00000269397 DOK2O60496 412 aa24.89■■□□□ 1.57
CBX4-201ENST00000269397 AQP8O94778 261 aa24.89■■□□□ 1.57
CBX4-201ENST00000269397 APBB3O95704 486 aa24.89■■□□□ 1.57
CBX4-201ENST00000269397 COL9A1P20849 921 aa24.89■■□□□ 1.57
CBX4-201ENST00000269397 MAOAP21397 527 aa24.89■■□□□ 1.57
CBX4-201ENST00000269397 FAM74A3Q4VXF1 159 aa24.89■■□□□ 1.57
CBX4-201ENST00000269397 ZNF542PQ5EBM4 170 aa24.89■■□□□ 1.57
CBX4-201ENST00000269397 ZNF627Q7L945 461 aa24.89■■□□□ 1.57
CBX4-201ENST00000269397 PM20D2Q8IYS1 436 aa24.89■■□□□ 1.57
CBX4-201ENST00000269397 GABRG1Q8N1C3 465 aa24.89■■□□□ 1.57
CBX4-201ENST00000269397 ST8SIA2Q92186 375 aa24.89■■□□□ 1.57
CBX4-201ENST00000269397 MCHR2Q969V1 340 aa24.89■■□□□ 1.57
CBX4-201ENST00000269397 RFPL4AA6NLU0 287 aa24.88■■□□□ 1.57
CBX4-201ENST00000269397 TMEM212A6NML5 194 aa24.88■■□□□ 1.57
CBX4-201ENST00000269397 RFPL4AL1F8VTS6 287 aa24.88■■□□□ 1.57
CBX4-201ENST00000269397 WNT11O96014 354 aa24.88■■□□□ 1.57
CBX4-201ENST00000269397 CSN2P05814 226 aa24.88■■□□□ 1.57
CBX4-201ENST00000269397 KIR2DL1P43626 348 aaPredicted RBP24.88■■□□□ 1.57
CBX4-201ENST00000269397 ATXN7L3Q14CW9 347 aaPredicted RBP24.88■■□□□ 1.57
CBX4-201ENST00000269397 GALNT16Q8N428 558 aa24.88■■□□□ 1.57
CBX4-201ENST00000269397 PHOSPHO1Q8TCT1 267 aa24.88■■□□□ 1.57
CBX4-201ENST00000269397 TMEM185BQ9H7F4 350 aa24.88■■□□□ 1.57
CBX4-201ENST00000269397 PRKACAP17612 351 aa24.88■■□□□ 1.57
CBX4-201ENST00000269397 METTL27Q8N6F8 245 aaPredicted RBP24.88■■□□□ 1.57
CBX4-201ENST00000269397 LRRC46Q96FV0 321 aa24.88■■□□□ 1.57
CBX4-201ENST00000269397 CERS4Q9HA82 394 aa24.88■■□□□ 1.57
CBX4-201ENST00000269397 CCSO14618 274 aa24.87■■□□□ 1.57
CBX4-201ENST00000269397 PRAMEF2O60811 474 aa24.87■■□□□ 1.57
CBX4-201ENST00000269397 HLA-DQA2P01906 255 aa24.87■■□□□ 1.57
CBX4-201ENST00000269397 RAB11BQ15907 218 aa24.87■■□□□ 1.57
CBX4-201ENST00000269397 ASPHD2Q6ICH7 369 aa24.87■■□□□ 1.57
CBX4-201ENST00000269397 PARGQ86W56 976 aa24.87■■□□□ 1.57
CBX4-201ENST00000269397 BEST3Q8N1M1 668 aa24.87■■□□□ 1.57
CBX4-201ENST00000269397 C12orf45Q8N5I9 185 aaPredicted RBP24.87■■□□□ 1.57
CBX4-201ENST00000269397 RSC1A1Q92681 617 aa24.87■■□□□ 1.57
CBX4-201ENST00000269397 NARS2Q96I59 477 aaKnown RBP24.87■■□□□ 1.57
CBX4-201ENST00000269397 C4orf45Q96LM5 186 aa24.87■■□□□ 1.57
CBX4-201ENST00000269397 ZNF75AQ96N20 296 aa24.87■■□□□ 1.57
CBX4-201ENST00000269397 SLC6A5Q9Y345 797 aa24.87■■□□□ 1.57
CBX4-201ENST00000269397 TMEM82A0PJX8 343 aa24.87■■□□□ 1.57
CBX4-201ENST00000269397 DNASE2O00115 360 aaPredicted RBP24.87■■□□□ 1.57
CBX4-201ENST00000269397 NDUFAF7Q7L592 441 aa24.87■■□□□ 1.57
CBX4-201ENST00000269397 ATG4DQ86TL0 474 aaPredicted RBP24.87■■□□□ 1.57
CBX4-201ENST00000269397 STEAP2Q8NFT2 490 aa24.87■■□□□ 1.57
CBX4-201ENST00000269397 OR1J2Q8NGS2 313 aa24.87■■□□□ 1.57
CBX4-201ENST00000269397 ELOVL3Q9HB03 270 aa24.87■■□□□ 1.57
CBX4-201ENST00000269397 TAS2R3Q9NYW6 316 aa24.87■■□□□ 1.57
CBX4-201ENST00000269397 FARSAQ9Y285 508 aaKnown RBP24.87■■□□□ 1.57
CBX4-201ENST00000269397 A0A0J9YY10 115 aa24.86■■□□□ 1.57
CBX4-201ENST00000269397 ALOX12BO75342 701 aa24.86■■□□□ 1.57
CBX4-201ENST00000269397 ST6GAL1P15907 406 aa24.86■■□□□ 1.57
CBX4-201ENST00000269397 NR0B2Q15466 257 aa24.86■■□□□ 1.57
CBX4-201ENST00000269397 SEC22AQ96IW7 307 aa24.86■■□□□ 1.57
CBX4-201ENST00000269397 INTS14Q96SY0 518 aa24.86■■□□□ 1.57
CBX4-201ENST00000269397 TCEAL2Q9H3H9 227 aaPredicted RBP24.86■■□□□ 1.57
CBX4-201ENST00000269397 CPNE7Q9UBL6 633 aa24.86■■□□□ 1.57
CBX4-201ENST00000269397 C11orf98E9PRG8 122 aa24.86■■□□□ 1.57
CBX4-201ENST00000269397 CDC40O60508 579 aaKnown RBP eCLIP24.86■■□□□ 1.571e-7■■■■□ 23.9
CBX4-201ENST00000269397 RAB3DO95716 219 aa24.86■■□□□ 1.57
CBX4-201ENST00000269397 VEGFBP49765 207 aa24.86■■□□□ 1.57
CBX4-201ENST00000269397 EIF2B5Q13144 721 aaKnown RBP24.86■■□□□ 1.57
CBX4-201ENST00000269397 MPPED2Q15777 294 aa24.86■■□□□ 1.57
CBX4-201ENST00000269397 MEP1BQ16820 701 aa24.86■■□□□ 1.57
CBX4-201ENST00000269397 ALG11Q2TAA5 492 aa24.86■■□□□ 1.57
CBX4-201ENST00000269397 DCBLD2Q96PD2 775 aa24.86■■□□□ 1.57
CBX4-201ENST00000269397 C17orf51A8MQB3 221 aa24.85■■□□□ 1.57
CBX4-201ENST00000269397 SRPX2O60687 465 aaPredicted RBP24.85■■□□□ 1.57
CBX4-201ENST00000269397 AMY2AP04746 511 aa24.85■■□□□ 1.57
CBX4-201ENST00000269397 ITGB2P05107 769 aa24.85■■□□□ 1.57
CBX4-201ENST00000269397 CELA2BP08218 269 aaPredicted RBP24.85■■□□□ 1.57
CBX4-201ENST00000269397 LUMP51884 338 aaPredicted RBP24.85■■□□□ 1.57
CBX4-201ENST00000269397 SCGB2B2Q4G0G5 96 aa24.85■■□□□ 1.57
CBX4-201ENST00000269397 EIF4E3Q8N5X7 224 aaKnown RBP24.85■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms