RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 PURGQ9UJV8 347 aaKnown RBP10.59□□□□□ -0.71
VPS33A-201ENST00000267199 KCNE3Q9Y6H6 103 aa10.59□□□□□ -0.71
VPS33A-201ENST00000267199 TMEM235A6NFC5 223 aa10.59□□□□□ -0.71
VPS33A-201ENST00000267199 EPHA1P21709 976 aa10.59□□□□□ -0.71
VPS33A-201ENST00000267199 ZFP36L2P47974 494 aaKnown RBP10.59□□□□□ -0.71
VPS33A-201ENST00000267199 DEFB133Q30KQ1 61 aa10.59□□□□□ -0.71
VPS33A-201ENST00000267199 PAPD4Q6PIY7 484 aaKnown RBP10.59□□□□□ -0.71
VPS33A-201ENST00000267199 NHLRC1Q6VVB1 395 aa10.59□□□□□ -0.71
VPS33A-201ENST00000267199 OVCH1Q7RTY7 1134 aa10.59□□□□□ -0.71
VPS33A-201ENST00000267199 C9orf62Q8N4C0 152 aa10.59□□□□□ -0.71
VPS33A-201ENST00000267199 PATE1Q8WXA2 126 aa10.59□□□□□ -0.71
VPS33A-201ENST00000267199 TRMT61AQ96FX7 289 aaKnown RBP10.59□□□□□ -0.71
VPS33A-201ENST00000267199 SLC25A21Q9BQT8 299 aaPredicted RBP10.59□□□□□ -0.71
VPS33A-201ENST00000267199 LUZP4Q9P127 313 aa10.59□□□□□ -0.71
VPS33A-201ENST00000267199 GPR55Q9Y2T6 319 aaPredicted RBP10.59□□□□□ -0.71
VPS33A-201ENST00000267199 SERINC4A6NH21 518 aa10.59□□□□□ -0.71
VPS33A-201ENST00000267199 CBX7O95931 251 aa10.59□□□□□ -0.71
VPS33A-201ENST00000267199 KLK3P07288 261 aaPredicted RBP10.59□□□□□ -0.71
VPS33A-201ENST00000267199 GLI4P10075 376 aa10.59□□□□□ -0.71
VPS33A-201ENST00000267199 MAGEB1P43366 347 aa10.59□□□□□ -0.71
VPS33A-201ENST00000267199 CDK5R1Q15078 307 aa10.59□□□□□ -0.71
VPS33A-201ENST00000267199 RSU1Q15404 277 aa10.59□□□□□ -0.71
VPS33A-201ENST00000267199 TMEM81Q6P7N7 255 aa10.59□□□□□ -0.71
VPS33A-201ENST00000267199 SSX9Q7RTT3 188 aa10.59□□□□□ -0.71
VPS33A-201ENST00000267199 LRRTM1Q86UE6 522 aa10.59□□□□□ -0.71
VPS33A-201ENST00000267199 LINC00346Q8IVM7 164 aa10.59□□□□□ -0.71
VPS33A-201ENST00000267199 CDH26Q8IXH8 852 aa10.59□□□□□ -0.71
VPS33A-201ENST00000267199 OR4C15Q8NGM1 316 aa10.59□□□□□ -0.71
VPS33A-201ENST00000267199 FAM3CQ92520 227 aa10.59□□□□□ -0.71
VPS33A-201ENST00000267199 C8orf33Q9H7E9 229 aaPredicted RBP10.59□□□□□ -0.71
VPS33A-201ENST00000267199 DUSP22Q9NRW4 184 aa10.59□□□□□ -0.71
VPS33A-201ENST00000267199 ALKBH4Q9NXW9 302 aa10.59□□□□□ -0.71
VPS33A-201ENST00000267199 EMC9Q9Y3B6 208 aa10.59□□□□□ -0.71
VPS33A-201ENST00000267199 TRAV20A0A0B4J274 112 aa10.58□□□□□ -0.72
VPS33A-201ENST00000267199 ZNF705FA8MVS1 300 aaPredicted RBP10.58□□□□□ -0.72
VPS33A-201ENST00000267199 AIPO00170 330 aa10.58□□□□□ -0.72
VPS33A-201ENST00000267199 CTNSO60931 367 aa10.58□□□□□ -0.72
VPS33A-201ENST00000267199 DNAJB6O75190 326 aa10.58□□□□□ -0.72
VPS33A-201ENST00000267199 TPPPO94811 219 aa10.58□□□□□ -0.72
VPS33A-201ENST00000267199 ZNF705DP0CH99 300 aaPredicted RBP10.58□□□□□ -0.72
VPS33A-201ENST00000267199 ZNF705BP0CI00 300 aaPredicted RBP10.58□□□□□ -0.72
VPS33A-201ENST00000267199 SERPINA2P20848 420 aa10.58□□□□□ -0.72
VPS33A-201ENST00000267199 ZP3P21754 424 aa10.58□□□□□ -0.72
VPS33A-201ENST00000267199 CRABP1P29762 137 aa10.58□□□□□ -0.72
VPS33A-201ENST00000267199 SLC6A8P48029 635 aa10.58□□□□□ -0.72
VPS33A-201ENST00000267199 LSM11P83369 360 aaKnown RBP eCLIP10.58□□□□□ -0.72
VPS33A-201ENST00000267199 OR5D14Q8NGL3 314 aa10.58□□□□□ -0.72
VPS33A-201ENST00000267199 ZG16BQ96DA0 208 aa10.58□□□□□ -0.72
VPS33A-201ENST00000267199 SMIM19Q96E16 107 aa10.58□□□□□ -0.72
VPS33A-201ENST00000267199 OR1F2PQ96R84 312 aa10.58□□□□□ -0.72
VPS33A-201ENST00000267199 NUDT22Q9BRQ3 303 aa10.58□□□□□ -0.72
VPS33A-201ENST00000267199 C19orf53Q9UNZ5 99 aaPredicted RBP10.58□□□□□ -0.72
VPS33A-201ENST00000267199 ETV7Q9Y603 341 aa10.58□□□□□ -0.72
VPS33A-201ENST00000267199 LTBP1Q14766 1721 aa10.58□□□□□ -0.72
VPS33A-201ENST00000267199 ZNF264O43296 627 aa10.58□□□□□ -0.72
VPS33A-201ENST00000267199 CHATP28329 748 aa10.58□□□□□ -0.72
VPS33A-201ENST00000267199 HMGA2P52926 109 aa10.58□□□□□ -0.72
VPS33A-201ENST00000267199 GUCA2AQ02747 115 aa10.58□□□□□ -0.72
VPS33A-201ENST00000267199 PGAP1Q75T13 922 aa10.58□□□□□ -0.72
VPS33A-201ENST00000267199 EID2Q8N6I1 236 aa10.58□□□□□ -0.72
VPS33A-201ENST00000267199 DUSP18Q8NEJ0 188 aa10.58□□□□□ -0.72
VPS33A-201ENST00000267199 CCL4L1Q8NHW4 92 aa10.58□□□□□ -0.72
VPS33A-201ENST00000267199 HAVCR2Q8TDQ0 301 aa10.58□□□□□ -0.72
VPS33A-201ENST00000267199 SENP5Q96HI0 755 aaPredicted RBP10.58□□□□□ -0.72
VPS33A-201ENST00000267199 CXorf58Q96LI9 332 aa10.58□□□□□ -0.72
VPS33A-201ENST00000267199 GFOD1Q9NXC2 390 aa10.58□□□□□ -0.72
VPS33A-201ENST00000267199 C19orf25Q9UFG5 118 aaPredicted RBP10.58□□□□□ -0.72
VPS33A-201ENST00000267199 ING1Q9UK53 422 aaPredicted RBP10.58□□□□□ -0.72
VPS33A-201ENST00000267199 MEIKINA0A087WXM9 373 aa10.58□□□□□ -0.72
VPS33A-201ENST00000267199 OR2T1O43869 369 aa10.58□□□□□ -0.72
VPS33A-201ENST00000267199 FGF17O60258 216 aa10.58□□□□□ -0.72
VPS33A-201ENST00000267199 CNOT4O95628 575 aaKnown RBP10.58□□□□□ -0.72
VPS33A-201ENST00000267199 PI3P19957 117 aa10.58□□□□□ -0.72
VPS33A-201ENST00000267199 UBE2KP61086 200 aa10.58□□□□□ -0.72
VPS33A-201ENST00000267199 EEF1A1P5Q5VTE0 462 aa10.58□□□□□ -0.72
VPS33A-201ENST00000267199 FAM69BQ5VUD6 431 aa10.58□□□□□ -0.72
VPS33A-201ENST00000267199 LAIR2Q6ISS4 152 aa10.58□□□□□ -0.72
VPS33A-201ENST00000267199 LILRA6Q6PI73 481 aa10.58□□□□□ -0.72
VPS33A-201ENST00000267199 PLXDC1Q8IUK5 500 aa10.58□□□□□ -0.72
VPS33A-201ENST00000267199 FRMD1Q8N878 549 aa10.58□□□□□ -0.72
VPS33A-201ENST00000267199 OR4C16Q8NGL9 310 aa10.58□□□□□ -0.72
VPS33A-201ENST00000267199 FRZBQ92765 325 aa10.58□□□□□ -0.72
VPS33A-201ENST00000267199 SYT3Q9BQG1 590 aa10.58□□□□□ -0.72
VPS33A-201ENST00000267199 KCNS2Q9ULS6 477 aa10.58□□□□□ -0.72
VPS33A-201ENST00000267199 TRIM77I1YAP6 450 aa10.58□□□□□ -0.72
VPS33A-201ENST00000267199 SLC35E2P0CK97 266 aa10.58□□□□□ -0.72
VPS33A-201ENST00000267199 SPI1P17947 270 aa10.58□□□□□ -0.72
VPS33A-201ENST00000267199 SLC6A1P30531 599 aa10.58□□□□□ -0.72
VPS33A-201ENST00000267199 SFTPDP35247 375 aa10.58□□□□□ -0.72
VPS33A-201ENST00000267199 RAB5CP51148 216 aa10.58□□□□□ -0.72
VPS33A-201ENST00000267199 SOHLH1Q5JUK2 328 aa10.58□□□□□ -0.72
VPS33A-201ENST00000267199 ZNF709Q8N972 641 aa10.58□□□□□ -0.72
VPS33A-201ENST00000267199 LPAR4Q99677 370 aa10.58□□□□□ -0.72
VPS33A-201ENST00000267199 TAS2R5Q9NYW4 299 aa10.58□□□□□ -0.72
VPS33A-201ENST00000267199 CSAG2Q9Y5P2 127 aa10.58□□□□□ -0.72
VPS33A-201ENST00000267199 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.57□□□□□ -0.72
VPS33A-201ENST00000267199 A0A0U1RQK1 487 aa10.57□□□□□ -0.72
VPS33A-201ENST00000267199 CCDC85CA6NKD9 419 aa10.57□□□□□ -0.72
VPS33A-201ENST00000267199 DIRAS3O95661 229 aa10.57□□□□□ -0.72
VPS33A-201ENST00000267199 OR13C7P0DN81 318 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms