RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 MRPS28Q9Y2Q9 187 aaKnown RBP14.09□□□□□ -0.15
TIMP3-201ENST00000266085 IGHV3-9P01782 118 aa14.09□□□□□ -0.15
TIMP3-201ENST00000266085 TK1P04183 234 aa14.09□□□□□ -0.15
TIMP3-201ENST00000266085 PSMB1P20618 241 aaKnown RBP14.09□□□□□ -0.15
TIMP3-201ENST00000266085 HSF1Q00613 529 aa14.09□□□□□ -0.15
TIMP3-201ENST00000266085 FAHD1Q6P587 224 aa14.09□□□□□ -0.15
TIMP3-201ENST00000266085 OR2I1PQ8NGU4 316 aa14.09□□□□□ -0.15
TIMP3-201ENST00000266085 IP6K3Q96PC2 410 aa14.09□□□□□ -0.15
TIMP3-201ENST00000266085 CHST11Q9NPF2 352 aa14.09□□□□□ -0.15
TIMP3-201ENST00000266085 NCOR1O75376 2440 aa14.09□□□□□ -0.15
TIMP3-201ENST00000266085 ARRDC5A6NEK1 342 aa14.08□□□□□ -0.15
TIMP3-201ENST00000266085 SLC34A2O95436 690 aa14.08□□□□□ -0.15
TIMP3-201ENST00000266085 HOXC4P09017 264 aaPredicted RBP14.08□□□□□ -0.15
TIMP3-201ENST00000266085 HOXB3P14651 431 aaPredicted RBP14.08□□□□□ -0.15
TIMP3-201ENST00000266085 PCSK6P29122 969 aa14.08□□□□□ -0.15
TIMP3-201ENST00000266085 NXPH1P58417 271 aa14.08□□□□□ -0.15
TIMP3-201ENST00000266085 PRSS41Q7RTY9 318 aa14.08□□□□□ -0.15
TIMP3-201ENST00000266085 ZADH2Q8N4Q0 377 aa14.08□□□□□ -0.15
TIMP3-201ENST00000266085 OR51D1Q8NGF3 324 aa14.08□□□□□ -0.15
TIMP3-201ENST00000266085 OR4K15Q8NH41 348 aa14.08□□□□□ -0.15
TIMP3-201ENST00000266085 GLYATL2Q8WU03 294 aa14.08□□□□□ -0.15
TIMP3-201ENST00000266085 LRFN5Q96NI6 719 aa14.08□□□□□ -0.15
TIMP3-201ENST00000266085 TSNAXQ99598 290 aaKnown RBP14.08□□□□□ -0.15
TIMP3-201ENST00000266085 LHX6Q9UPM6 363 aa14.08□□□□□ -0.15
TIMP3-201ENST00000266085 KCNE1BA0A087WTH5 132 aa14.08□□□□□ -0.16
TIMP3-201ENST00000266085 EVI2BP34910 448 aa14.08□□□□□ -0.16
TIMP3-201ENST00000266085 ZNF93P35789 620 aaPredicted RBP14.08□□□□□ -0.16
TIMP3-201ENST00000266085 ETV5P41161 510 aa14.08□□□□□ -0.16
TIMP3-201ENST00000266085 ETV1P50549 477 aa14.08□□□□□ -0.16
TIMP3-201ENST00000266085 STEAP3Q658P3 488 aa14.08□□□□□ -0.16
TIMP3-201ENST00000266085 CALHM3Q86XJ0 350 aa14.08□□□□□ -0.16
TIMP3-201ENST00000266085 OR6M1Q8NGM8 313 aa14.08□□□□□ -0.16
TIMP3-201ENST00000266085 DCUN1D4Q92564 292 aa14.08□□□□□ -0.16
TIMP3-201ENST00000266085 OR2M2Q96R28 347 aa14.08□□□□□ -0.16
TIMP3-201ENST00000266085 SELENOIQ9C0D9 397 aa14.08□□□□□ -0.16
TIMP3-201ENST00000266085 KCNE3Q9Y6H6 103 aa14.08□□□□□ -0.16
TIMP3-201ENST00000266085 PRAMEF27A3QJZ7 478 aa14.08□□□□□ -0.16
TIMP3-201ENST00000266085 AGAP14A8MT82 685 aa14.08□□□□□ -0.16
TIMP3-201ENST00000266085 DPM1O60762 260 aa14.08□□□□□ -0.16
TIMP3-201ENST00000266085 HTR2BP41595 481 aa14.08□□□□□ -0.16
TIMP3-201ENST00000266085 EMC4Q5J8M3 183 aa14.08□□□□□ -0.16
TIMP3-201ENST00000266085 GLYATL3Q5SZD4 288 aa14.08□□□□□ -0.16
TIMP3-201ENST00000266085 KLHDC8BQ8IXV7 354 aa14.08□□□□□ -0.16
TIMP3-201ENST00000266085 FGGYQ96C11 551 aa14.08□□□□□ -0.16
TIMP3-201ENST00000266085 EIF5A2Q9GZV4 153 aaKnown RBP14.08□□□□□ -0.16
TIMP3-201ENST00000266085 TET1Q8NFU7 2136 aa14.08□□□□□ -0.16
TIMP3-201ENST00000266085 A0A1B0GVG6 124 aa14.08□□□□□ -0.16
TIMP3-201ENST00000266085 TNFRSF10AO00220 468 aa14.08□□□□□ -0.16
TIMP3-201ENST00000266085 HLA-AP01891 365 aaKnown RBP14.08□□□□□ -0.16
TIMP3-201ENST00000266085 ALDOBP05062 364 aa14.08□□□□□ -0.16
TIMP3-201ENST00000266085 SRMP19623 302 aa14.08□□□□□ -0.16
TIMP3-201ENST00000266085 RPS19P39019 145 aaKnown RBP14.08□□□□□ -0.16
TIMP3-201ENST00000266085 TAS2R46P59540 309 aa14.08□□□□□ -0.16
TIMP3-201ENST00000266085 RAE1P78406 368 aaKnown RBP14.08□□□□□ -0.16
TIMP3-201ENST00000266085 SELENBP1Q13228 472 aa14.08□□□□□ -0.16
TIMP3-201ENST00000266085 CCDC28AQ8IWP9 274 aa14.08□□□□□ -0.16
TIMP3-201ENST00000266085 TMEM221A6NGB7 291 aa14.07□□□□□ -0.16
TIMP3-201ENST00000266085 SLC2A10O95528 541 aa14.07□□□□□ -0.16
TIMP3-201ENST00000266085 APOC3P02656 99 aa14.07□□□□□ -0.16
TIMP3-201ENST00000266085 SPI1P17947 270 aa14.07□□□□□ -0.16
TIMP3-201ENST00000266085 RNF4P78317 190 aa14.07□□□□□ -0.16
TIMP3-201ENST00000266085 SRSF5Q13243 272 aaKnown RBP14.07□□□□□ -0.16
TIMP3-201ENST00000266085 RBMS2Q15434 407 aaKnown RBP14.07□□□□□ -0.16
TIMP3-201ENST00000266085 RNF165Q6ZSG1 346 aa14.07□□□□□ -0.16
TIMP3-201ENST00000266085 C1orf210Q8IVY1 113 aa14.07□□□□□ -0.16
TIMP3-201ENST00000266085 NKAIN3Q8N8D7 197 aa14.07□□□□□ -0.16
TIMP3-201ENST00000266085 OR4N2Q8NGD1 307 aa14.07□□□□□ -0.16
TIMP3-201ENST00000266085 NRTNQ99748 197 aa14.07□□□□□ -0.16
TIMP3-201ENST00000266085 PSD2Q9BQI7 771 aa14.07□□□□□ -0.16
TIMP3-201ENST00000266085 ZNF286AQ9HBT8 521 aa14.07□□□□□ -0.16
TIMP3-201ENST00000266085 ASPDHA6ND91 283 aa14.07□□□□□ -0.16
TIMP3-201ENST00000266085 SLC2A1P11166 492 aa14.07□□□□□ -0.16
TIMP3-201ENST00000266085 BLVRBP30043 206 aaPredicted RBP14.07□□□□□ -0.16
TIMP3-201ENST00000266085 IL2RGP31785 369 aa14.07□□□□□ -0.16
TIMP3-201ENST00000266085 DIO1P49895 249 aa14.07□□□□□ -0.16
TIMP3-201ENST00000266085 RPL18Q07020 188 aaKnown RBP14.07□□□□□ -0.16
TIMP3-201ENST00000266085 TNK1Q13470 666 aa14.07□□□□□ -0.16
TIMP3-201ENST00000266085 PRTGQ2VWP7 1150 aa14.07□□□□□ -0.16
TIMP3-201ENST00000266085 VHLLQ6RSH7 139 aa14.07□□□□□ -0.16
TIMP3-201ENST00000266085 LYPD4Q6UWN0 246 aa14.07□□□□□ -0.16
TIMP3-201ENST00000266085 LINC00299Q6ZSB3 139 aa14.07□□□□□ -0.16
TIMP3-201ENST00000266085 OR1J2Q8NGS2 313 aa14.07□□□□□ -0.16
TIMP3-201ENST00000266085 HSD17B8Q92506 261 aa14.07□□□□□ -0.16
TIMP3-201ENST00000266085 ACKR4Q9NPB9 350 aa14.07□□□□□ -0.16
TIMP3-201ENST00000266085 CHRNB1P11230 501 aa14.07□□□□□ -0.16
TIMP3-201ENST00000266085 EPHA2P29317 976 aa14.07□□□□□ -0.16
TIMP3-201ENST00000266085 ERVK-16P61578 105 aa14.07□□□□□ -0.16
TIMP3-201ENST00000266085 PPP1CAP62136 330 aa14.07□□□□□ -0.16
TIMP3-201ENST00000266085 VN1R4Q7Z5H5 301 aa14.07□□□□□ -0.16
TIMP3-201ENST00000266085 TMEM99Q8N816 258 aa14.07□□□□□ -0.16
TIMP3-201ENST00000266085 ZFAND1Q8TCF1 268 aa14.07□□□□□ -0.16
TIMP3-201ENST00000266085 B3GNT2Q9NY97 397 aa14.07□□□□□ -0.16
TIMP3-201ENST00000266085 GPR55Q9Y2T6 319 aaPredicted RBP14.07□□□□□ -0.16
TIMP3-201ENST00000266085 ETV7Q9Y603 341 aa14.07□□□□□ -0.16
TIMP3-201ENST00000266085 PEX14O75381 377 aa14.07□□□□□ -0.16
TIMP3-201ENST00000266085 CPT2P23786 658 aa14.07□□□□□ -0.16
TIMP3-201ENST00000266085 GRB2P62993 217 aaKnown RBP14.07□□□□□ -0.16
TIMP3-201ENST00000266085 DHRS13Q6UX07 377 aa14.07□□□□□ -0.16
TIMP3-201ENST00000266085 LANCL3Q6ZV70 420 aa14.07□□□□□ -0.16
TIMP3-201ENST00000266085 PGAP1Q75T13 922 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms