RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 TTC9Q92623 222 aa8.26□□□□□ -1.09
MSH4-201ENST00000263187 LMF2Q9BU23 707 aaKnown RBP8.26□□□□□ -1.09
MSH4-201ENST00000263187 TINAGL1Q9GZM7 467 aaPredicted RBP8.26□□□□□ -1.09
MSH4-201ENST00000263187 COMMD4Q9H0A8 199 aa8.26□□□□□ -1.09
MSH4-201ENST00000263187 GPN1Q9HCN4 374 aaPredicted RBP8.26□□□□□ -1.09
MSH4-201ENST00000263187 DIABLOQ9NR28 239 aa8.26□□□□□ -1.09
MSH4-201ENST00000263187 TAS2R5Q9NYW4 299 aa8.26□□□□□ -1.09
MSH4-201ENST00000263187 PCDH15Q96QU1 1955 aa8.26□□□□□ -1.09
MSH4-201ENST00000263187 UBE2QL1A1L167 161 aa8.26□□□□□ -1.09
MSH4-201ENST00000263187 OR4C45A6NMZ5 311 aa8.26□□□□□ -1.09
MSH4-201ENST00000263187 CDK2AP1O14519 115 aa8.26□□□□□ -1.09
MSH4-201ENST00000263187 PPM1BO75688 479 aa8.26□□□□□ -1.09
MSH4-201ENST00000263187 GLSO94925 669 aaPredicted RBP8.26□□□□□ -1.09
MSH4-201ENST00000263187 NDUFB6O95139 128 aa8.26□□□□□ -1.09
MSH4-201ENST00000263187 UTS2O95399 124 aa8.26□□□□□ -1.09
MSH4-201ENST00000263187 SDHAP31040 664 aa8.26□□□□□ -1.09
MSH4-201ENST00000263187 SEC61A1P61619 476 aaKnown RBP8.26□□□□□ -1.09
MSH4-201ENST00000263187 MFGE8Q08431 387 aaPredicted RBP8.26□□□□□ -1.09
MSH4-201ENST00000263187 EIF2B5Q13144 721 aaKnown RBP8.26□□□□□ -1.09
MSH4-201ENST00000263187 ZNF141Q15928 474 aa8.26□□□□□ -1.09
MSH4-201ENST00000263187 C1orf189Q5VU69 101 aa8.26□□□□□ -1.09
MSH4-201ENST00000263187 ZNF626Q68DY1 528 aa8.26□□□□□ -1.09
MSH4-201ENST00000263187 FAM122BQ7Z309 247 aa8.26□□□□□ -1.09
MSH4-201ENST00000263187 RTN4RL2Q86UN3 420 aa8.26□□□□□ -1.09
MSH4-201ENST00000263187 GRAMD2AQ8IUY3 354 aa8.26□□□□□ -1.09
MSH4-201ENST00000263187 CMBLQ96DG6 245 aa8.26□□□□□ -1.09
MSH4-201ENST00000263187 TOE1Q96GM8 510 aaKnown RBP8.26□□□□□ -1.09
MSH4-201ENST00000263187 GABRG3Q99928 467 aa8.26□□□□□ -1.09
MSH4-201ENST00000263187 C7orf50Q9BRJ6 194 aaKnown RBP8.26□□□□□ -1.09
MSH4-201ENST00000263187 TRAF4Q9BUZ4 470 aaPredicted RBP8.26□□□□□ -1.09
MSH4-201ENST00000263187 NKX2-4Q9H2Z4 354 aa8.26□□□□□ -1.09
MSH4-201ENST00000263187 POFUT1Q9H488 388 aa8.26□□□□□ -1.09
MSH4-201ENST00000263187 FRYQ5TBA9 3013 aa8.26□□□□□ -1.09
MSH4-201ENST00000263187 ABCA7Q8IZY2 2146 aa8.25□□□□□ -1.09
MSH4-201ENST00000263187 DENND4AQ7Z401 1863 aa8.25□□□□□ -1.09
MSH4-201ENST00000263187 TMEM272A0A1B0GTI8 110 aa8.25□□□□□ -1.09
MSH4-201ENST00000263187 LOC101059948A0A1B0GTJ6 334 aa8.25□□□□□ -1.09
MSH4-201ENST00000263187 hCG_1807616A0A1W2PRN6 198 aa8.25□□□□□ -1.09
MSH4-201ENST00000263187 NPIPB9F8W1W9 429 aa8.25□□□□□ -1.09
MSH4-201ENST00000263187 ARPC3O15145 178 aa8.25□□□□□ -1.09
MSH4-201ENST00000263187 CTDSPLO15194 276 aa8.25□□□□□ -1.09
MSH4-201ENST00000263187 ALOX12BO75342 701 aa8.25□□□□□ -1.09
MSH4-201ENST00000263187 CTAG2O75638 210 aa8.25□□□□□ -1.09
MSH4-201ENST00000263187 IL11P20809 199 aa8.25□□□□□ -1.09
MSH4-201ENST00000263187 TNFRSF4P43489 277 aa8.25□□□□□ -1.09
MSH4-201ENST00000263187 NR0B1P51843 470 aaKnown RBP8.25□□□□□ -1.09
MSH4-201ENST00000263187 GLYATL3Q5SZD4 288 aa8.25□□□□□ -1.09
MSH4-201ENST00000263187 ZNF684Q5T5D7 378 aa8.25□□□□□ -1.09
MSH4-201ENST00000263187 WBP2NLQ6ICG8 309 aa8.25□□□□□ -1.09
MSH4-201ENST00000263187 LRFN4Q6PJG9 635 aa8.25□□□□□ -1.09
MSH4-201ENST00000263187 TMEM184AQ6ZMB5 413 aa8.25□□□□□ -1.09
MSH4-201ENST00000263187 OR6M1Q8NGM8 313 aa8.25□□□□□ -1.09
MSH4-201ENST00000263187 PHOSPHO2Q8TCD6 241 aa8.25□□□□□ -1.09
MSH4-201ENST00000263187 METTL21AQ8WXB1 218 aa8.25□□□□□ -1.09
MSH4-201ENST00000263187 NARS2Q96I59 477 aaKnown RBP8.25□□□□□ -1.09
MSH4-201ENST00000263187 INTS14Q96SY0 518 aa8.25□□□□□ -1.09
MSH4-201ENST00000263187 CMKLR1Q99788 373 aa8.25□□□□□ -1.09
MSH4-201ENST00000263187 MRPS33Q9Y291 106 aaKnown RBP8.25□□□□□ -1.09
MSH4-201ENST00000263187 CLDN16Q9Y5I7 305 aa8.25□□□□□ -1.09
MSH4-201ENST00000263187 URB1O60287 2271 aaKnown RBP8.25□□□□□ -1.09
MSH4-201ENST00000263187 IGHV3-20A0A0C4DH32 117 aa8.25□□□□□ -1.09
MSH4-201ENST00000263187 IGHV5-51A0A0C4DH38 117 aa8.25□□□□□ -1.09
MSH4-201ENST00000263187 GGT3PA6NGU5 568 aa8.25□□□□□ -1.09
MSH4-201ENST00000263187 EFCAB7A8K855 629 aa8.25□□□□□ -1.09
MSH4-201ENST00000263187 XKRYO14609 159 aa8.25□□□□□ -1.09
MSH4-201ENST00000263187 ZNF264O43296 627 aa8.25□□□□□ -1.09
MSH4-201ENST00000263187 APOC3P02656 99 aa8.25□□□□□ -1.09
MSH4-201ENST00000263187 HLA-DOBP13765 273 aa8.25□□□□□ -1.09
MSH4-201ENST00000263187 GABRG2P18507 467 aa8.25□□□□□ -1.09
MSH4-201ENST00000263187 CXCR1P25024 350 aa8.25□□□□□ -1.09
MSH4-201ENST00000263187 UBE2IP63279 158 aaKnown RBP8.25□□□□□ -1.09
MSH4-201ENST00000263187 SHHQ15465 462 aa8.25□□□□□ -1.09
MSH4-201ENST00000263187 MOGAT2Q3SYC2 334 aa8.25□□□□□ -1.09
MSH4-201ENST00000263187 SLC22A6Q4U2R8 563 aa8.25□□□□□ -1.09
MSH4-201ENST00000263187 VWA2Q5GFL6 755 aa8.25□□□□□ -1.09
MSH4-201ENST00000263187 TMEM81Q6P7N7 255 aa8.25□□□□□ -1.09
MSH4-201ENST00000263187 BAIAP2L2Q6UXY1 529 aa8.25□□□□□ -1.09
MSH4-201ENST00000263187 CFAP77Q6ZQR2 320 aa8.25□□□□□ -1.09
MSH4-201ENST00000263187 ATG4DQ86TL0 474 aaPredicted RBP8.25□□□□□ -1.09
MSH4-201ENST00000263187 ACBD4Q8NC06 268 aa8.25□□□□□ -1.09
MSH4-201ENST00000263187 GPR148Q8TDV2 347 aa8.25□□□□□ -1.09
MSH4-201ENST00000263187 FAM3DQ96BQ1 224 aa8.25□□□□□ -1.09
MSH4-201ENST00000263187 MRPL48Q96GC5 212 aaKnown RBP8.25□□□□□ -1.09
MSH4-201ENST00000263187 NPAS1Q99742 590 aa8.25□□□□□ -1.09
MSH4-201ENST00000263187 SEMA6CQ9H3T2 930 aa8.25□□□□□ -1.09
MSH4-201ENST00000263187 C12orf4Q9NQ89 552 aa8.25□□□□□ -1.09
MSH4-201ENST00000263187 OBP2AQ9NY56 170 aa8.25□□□□□ -1.09
MSH4-201ENST00000263187 TAS2R4Q9NYW5 299 aa8.25□□□□□ -1.09
MSH4-201ENST00000263187 RP2O75695 350 aa8.25□□□□□ -1.09
MSH4-201ENST00000263187 ABHD16AO95870 558 aa8.25□□□□□ -1.09
MSH4-201ENST00000263187 RENP00797 406 aa8.25□□□□□ -1.09
MSH4-201ENST00000263187 RLN2P04090 185 aa8.25□□□□□ -1.09
MSH4-201ENST00000263187 NMBP08949 121 aa8.25□□□□□ -1.09
MSH4-201ENST00000263187 ALOX5APP20292 161 aa8.25□□□□□ -1.09
MSH4-201ENST00000263187 S100A11P31949 105 aa8.25□□□□□ -1.09
MSH4-201ENST00000263187 NUP62P37198 522 aaPredicted RBP8.25□□□□□ -1.09
MSH4-201ENST00000263187 MNDAP41218 407 aa8.25□□□□□ -1.09
MSH4-201ENST00000263187 AKR1C2P52895 323 aa8.25□□□□□ -1.09
MSH4-201ENST00000263187 RPS4XP62701 263 aaKnown RBP8.25□□□□□ -1.09
MSH4-201ENST00000263187 ADAM8P78325 824 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms