RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 FOLR3P41439 243 aa11.1□□□□□ -0.63
SMG6-201ENST00000263073 MRPL19P49406 292 aaKnown RBP11.1□□□□□ -0.63
SMG6-201ENST00000263073 SLC10A1Q14973 349 aa11.1□□□□□ -0.63
SMG6-201ENST00000263073 FXNQ16595 210 aa11.1□□□□□ -0.63
SMG6-201ENST00000263073 MED17Q9NVC6 651 aa11.1□□□□□ -0.63
SMG6-201ENST00000263073 LRP6O75581 1613 aa11.1□□□□□ -0.63
SMG6-201ENST00000263073 IGHV3-20A0A0C4DH32 117 aa11.1□□□□□ -0.63
SMG6-201ENST00000263073 TCRBV5S2A0A599 114 aa11.1□□□□□ -0.63
SMG6-201ENST00000263073 ZNF724A8MTY0 619 aa11.1□□□□□ -0.63
SMG6-201ENST00000263073 G0S2P27469 103 aa11.1□□□□□ -0.63
SMG6-201ENST00000263073 NOVP48745 357 aa11.1□□□□□ -0.63
SMG6-201ENST00000263073 CAMK2BQ13554 666 aa11.1□□□□□ -0.63
SMG6-201ENST00000263073 IL34Q6ZMJ4 242 aa11.1□□□□□ -0.63
SMG6-201ENST00000263073 RNF113BQ8IZP6 322 aaKnown RBP11.1□□□□□ -0.63
SMG6-201ENST00000263073 HAVCR2Q8TDQ0 301 aa11.1□□□□□ -0.63
SMG6-201ENST00000263073 ARRDC3Q96B67 414 aa11.1□□□□□ -0.63
SMG6-201ENST00000263073 INTS12Q96CB8 462 aaKnown RBP11.1□□□□□ -0.63
SMG6-201ENST00000263073 SLC39A13Q96H72 371 aa11.1□□□□□ -0.63
SMG6-201ENST00000263073 REEP6Q96HR9 211 aa11.1□□□□□ -0.63
SMG6-201ENST00000263073 PRSS16Q9NQE7 514 aa11.1□□□□□ -0.63
SMG6-201ENST00000263073 GON4LQ3T8J9 2241 aa11.09□□□□□ -0.63
SMG6-201ENST00000263073 TMED7-TICAM2A0A0A6YYA0 188 aa11.09□□□□□ -0.63
SMG6-201ENST00000263073 D6RAR5 112 aa11.09□□□□□ -0.63
SMG6-201ENST00000263073 PLPP1O14494 284 aa11.09□□□□□ -0.63
SMG6-201ENST00000263073 MTHFD2P13995 350 aa11.09□□□□□ -0.63
SMG6-201ENST00000263073 LAP3P28838 519 aa11.09□□□□□ -0.63
SMG6-201ENST00000263073 TRHRP34981 398 aaPredicted RBP11.09□□□□□ -0.63
SMG6-201ENST00000263073 BMPR1AP36894 532 aa11.09□□□□□ -0.63
SMG6-201ENST00000263073 PGFP49763 221 aa11.09□□□□□ -0.63
SMG6-201ENST00000263073 RAB30Q15771 203 aa11.09□□□□□ -0.63
SMG6-201ENST00000263073 TRMT12Q53H54 448 aaKnown RBP11.09□□□□□ -0.63
SMG6-201ENST00000263073 ZNF684Q5T5D7 378 aa11.09□□□□□ -0.63
SMG6-201ENST00000263073 FAM27D1Q5T7N8 215 aa11.09□□□□□ -0.63
SMG6-201ENST00000263073 DPPA2Q7Z7J5 298 aa11.09□□□□□ -0.63
SMG6-201ENST00000263073 L3MBTL4Q8NA19 623 aa11.09□□□□□ -0.63
SMG6-201ENST00000263073 OR51H1Q8NH63 302 aa11.09□□□□□ -0.63
SMG6-201ENST00000263073 TEAD3Q99594 435 aa11.09□□□□□ -0.63
SMG6-201ENST00000263073 KLHL42Q9P2K6 505 aa11.09□□□□□ -0.63
SMG6-201ENST00000263073 OR52A1Q9UKL2 312 aa11.09□□□□□ -0.63
SMG6-201ENST00000263073 PIGLQ9Y2B2 252 aa11.09□□□□□ -0.63
SMG6-201ENST00000263073 TMED7Q9Y3B3 224 aa11.09□□□□□ -0.63
SMG6-201ENST00000263073 H3BQ06 376 aaPredicted RBP11.09□□□□□ -0.63
SMG6-201ENST00000263073 HTRA4P83105 476 aaPredicted RBP11.09□□□□□ -0.63
SMG6-201ENST00000263073 SEMA3BQ13214 749 aa11.09□□□□□ -0.63
SMG6-201ENST00000263073 ASAH1Q13510 395 aa11.09□□□□□ -0.63
SMG6-201ENST00000263073 FAM71CQ8NEG0 241 aa11.09□□□□□ -0.63
SMG6-201ENST00000263073 TXN2Q99757 166 aa11.09□□□□□ -0.63
SMG6-201ENST00000263073 PTTG3PQ9NZH4 202 aa11.09□□□□□ -0.63
SMG6-201ENST00000263073 ING1Q9UK53 422 aaPredicted RBP11.09□□□□□ -0.63
SMG6-201ENST00000263073 UMAD1C9J7I0 102 aa11.09□□□□□ -0.63
SMG6-201ENST00000263073 KLKB1P03952 638 aa11.09□□□□□ -0.63
SMG6-201ENST00000263073 CYBAP13498 195 aa11.09□□□□□ -0.63
SMG6-201ENST00000263073 NPPBP16860 134 aa11.09□□□□□ -0.63
SMG6-201ENST00000263073 ALOX5APP20292 161 aa11.09□□□□□ -0.63
SMG6-201ENST00000263073 OR2B11Q5JQS5 317 aa11.09□□□□□ -0.63
SMG6-201ENST00000263073 ZNF425Q6IV72 752 aa11.09□□□□□ -0.63
SMG6-201ENST00000263073 PGAP1Q75T13 922 aa11.09□□□□□ -0.63
SMG6-201ENST00000263073 ADGRE4PQ86SQ3 457 aa11.09□□□□□ -0.63
SMG6-201ENST00000263073 UHRF2Q96PU4 802 aa11.09□□□□□ -0.63
SMG6-201ENST00000263073 C1QTNF3Q9BXJ4 246 aa11.09□□□□□ -0.63
SMG6-201ENST00000263073 PPP1R14DQ9NXH3 145 aa11.09□□□□□ -0.63
SMG6-201ENST00000263073 AANATQ16613 207 aa11.09□□□□□ -0.63
SMG6-201ENST00000263073 CDH26Q8IXH8 852 aa11.09□□□□□ -0.63
SMG6-201ENST00000263073 MSI2Q96DH6 328 aaKnown RBP11.09□□□□□ -0.63
SMG6-201ENST00000263073 CALHM2Q9HA72 323 aa11.09□□□□□ -0.63
SMG6-201ENST00000263073 NDRG4Q9ULP0 352 aaKnown RBP11.09□□□□□ -0.63
SMG6-201ENST00000263073 KDM3BQ7LBC6 1761 aa11.09□□□□□ -0.63
SMG6-201ENST00000263073 LOC102725191A0A1B0GVB3 256 aa11.09□□□□□ -0.63
SMG6-201ENST00000263073 MCRIP1C9JLW8 97 aa11.09□□□□□ -0.63
SMG6-201ENST00000263073 CD1EP15812 388 aa11.09□□□□□ -0.63
SMG6-201ENST00000263073 CPEP16870 476 aa11.09□□□□□ -0.63
SMG6-201ENST00000263073 NAGAP17050 411 aa11.09□□□□□ -0.63
SMG6-201ENST00000263073 AADACP22760 399 aa11.09□□□□□ -0.63
SMG6-201ENST00000263073 ISG20Q96AZ6 181 aaKnown RBP11.09□□□□□ -0.63
SMG6-201ENST00000263073 TSSK2Q96PF2 358 aa11.09□□□□□ -0.63
SMG6-201ENST00000263073 ARV1Q9H2C2 271 aa11.09□□□□□ -0.63
SMG6-201ENST00000263073 HMGN4O00479 90 aa11.08□□□□□ -0.64
SMG6-201ENST00000263073 ZNF195O14628 629 aa11.08□□□□□ -0.64
SMG6-201ENST00000263073 FPR3P25089 353 aa11.08□□□□□ -0.64
SMG6-201ENST00000263073 PCBP3P57721 371 aaKnown RBP11.08□□□□□ -0.64
SMG6-201ENST00000263073 ALKAL1Q6UXT8 129 aa11.08□□□□□ -0.64
SMG6-201ENST00000263073 CMTM4Q8IZR5 234 aa11.08□□□□□ -0.64
SMG6-201ENST00000263073 SLC22A24Q8N4F4 322 aa11.08□□□□□ -0.64
SMG6-201ENST00000263073 ZFPM2Q8WW38 1151 aa11.08□□□□□ -0.64
SMG6-201ENST00000263073 ZNF629Q9UEG4 869 aaPredicted RBP11.08□□□□□ -0.64
SMG6-201ENST00000263073 SLC23A1Q9UHI7 598 aa11.08□□□□□ -0.64
SMG6-201ENST00000263073 SLC22A7Q9Y694 548 aa11.08□□□□□ -0.64
SMG6-201ENST00000263073 HPNP05981 417 aa11.08□□□□□ -0.64
SMG6-201ENST00000263073 MMP2P08253 660 aa11.08□□□□□ -0.64
SMG6-201ENST00000263073 HIST1H1CP16403 213 aaKnown RBP11.08□□□□□ -0.64
SMG6-201ENST00000263073 SNRPGP62308 76 aaKnown RBP11.08□□□□□ -0.64
SMG6-201ENST00000263073 OR8U1Q8NH10 309 aa11.08□□□□□ -0.64
SMG6-201ENST00000263073 OPALINQ96PE5 141 aa11.08□□□□□ -0.64
SMG6-201ENST00000263073 KCNJ15Q99712 375 aa11.08□□□□□ -0.64
SMG6-201ENST00000263073 HINT3Q9NQE9 182 aaKnown RBP11.08□□□□□ -0.64
SMG6-201ENST00000263073 NDUFB11Q9NX14 153 aa11.08□□□□□ -0.64
SMG6-201ENST00000263073 ENTPD2Q9Y5L3 495 aa11.08□□□□□ -0.64
SMG6-201ENST00000263073 C5P01031 1676 aa11.08□□□□□ -0.64
SMG6-201ENST00000263073 DNAJC25-GNG10A0A024R161 153 aa11.08□□□□□ -0.64
SMG6-201ENST00000263073 MBLAC1A4D2B0 266 aaPredicted RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms