RNA–Protein interactions for RNA: ENST00000262539.7

PTPN3-201, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 5 BASIC

Gene PTPN3, Length 6,832 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-201ENST00000262539 MACROD1Q9BQ69 325 aa7.5□□□□□ -1.21
PTPN3-201ENST00000262539 TCEAL2Q9H3H9 227 aaPredicted RBP7.5□□□□□ -1.21
PTPN3-201ENST00000262539 CALHM2Q9HA72 323 aa7.5□□□□□ -1.21
PTPN3-201ENST00000262539 CHRNA9Q9UGM1 479 aa7.5□□□□□ -1.21
PTPN3-201ENST00000262539 TMED7Q9Y3B3 224 aa7.5□□□□□ -1.21
PTPN3-201ENST00000262539 MT-CO2P00403 227 aa7.5□□□□□ -1.21
PTPN3-201ENST00000262539 DBHP09172 617 aa7.5□□□□□ -1.21
PTPN3-201ENST00000262539 DCTDP32321 178 aa7.5□□□□□ -1.21
PTPN3-201ENST00000262539 Q499Y3 187 aa7.5□□□□□ -1.21
PTPN3-201ENST00000262539 C6orf183Q5T699 404 aa7.5□□□□□ -1.21
PTPN3-201ENST00000262539 H1FNTQ75WM6 255 aaPredicted RBP7.5□□□□□ -1.21
PTPN3-201ENST00000262539 NKAIN4Q8IVV8 208 aa7.5□□□□□ -1.21
PTPN3-201ENST00000262539 TMEM178AQ8NBL3 297 aa7.5□□□□□ -1.21
PTPN3-201ENST00000262539 OR1L3Q8NH93 324 aa7.5□□□□□ -1.21
PTPN3-201ENST00000262539 TMIGD2Q96BF3 282 aa7.5□□□□□ -1.21
PTPN3-201ENST00000262539 GCM1Q9NP62 436 aa7.5□□□□□ -1.21
PTPN3-201ENST00000262539 HINT3Q9NQE9 182 aaKnown RBP7.5□□□□□ -1.21
PTPN3-201ENST00000262539 MUTYHQ9UIF7 546 aa7.5□□□□□ -1.21
PTPN3-201ENST00000262539 ZNF391Q9UJN7 358 aa7.5□□□□□ -1.21
PTPN3-201ENST00000262539 MRPS2Q9Y399 296 aaKnown RBP7.5□□□□□ -1.21
PTPN3-201ENST00000262539 CMAHPQ9Y471 501 aa7.5□□□□□ -1.21
PTPN3-201ENST00000262539 ETV7Q9Y603 341 aa7.5□□□□□ -1.21
PTPN3-201ENST00000262539 TRGV8A0A0C4DH27 118 aa7.49□□□□□ -1.21
PTPN3-201ENST00000262539 MRPL33O75394 65 aaKnown RBP7.49□□□□□ -1.21
PTPN3-201ENST00000262539 CRTAPO75718 401 aaPredicted RBP7.49□□□□□ -1.21
PTPN3-201ENST00000262539 ZIC2O95409 532 aaPredicted RBP7.49□□□□□ -1.21
PTPN3-201ENST00000262539 IGKV3-11P04433 115 aa7.49□□□□□ -1.21
PTPN3-201ENST00000262539 AKR1C4P17516 323 aa7.49□□□□□ -1.21
PTPN3-201ENST00000262539 SSR4P51571 173 aa7.49□□□□□ -1.21
PTPN3-201ENST00000262539 YBX1P67809 324 aaKnown RBP7.49□□□□□ -1.21
PTPN3-201ENST00000262539 SFTPA1Q8IWL2 248 aa7.49□□□□□ -1.21
PTPN3-201ENST00000262539 FAM71CQ8NEG0 241 aa7.49□□□□□ -1.21
PTPN3-201ENST00000262539 TIMD4Q96H15 378 aa7.49□□□□□ -1.21
PTPN3-201ENST00000262539 OR10A2Q9H208 303 aa7.49□□□□□ -1.21
PTPN3-201ENST00000262539 QPCTLQ9NXS2 382 aa7.49□□□□□ -1.21
PTPN3-201ENST00000262539 IER3IP1Q9Y5U9 82 aa7.49□□□□□ -1.21
PTPN3-201ENST00000262539 A0A1B0GV50 99 aa7.49□□□□□ -1.21
PTPN3-201ENST00000262539 PCP4L1A6NKN8 68 aa7.49□□□□□ -1.21
PTPN3-201ENST00000262539 GNB3P16520 340 aa7.49□□□□□ -1.21
PTPN3-201ENST00000262539 GP2P55259 537 aaKnown RBP7.49□□□□□ -1.21
PTPN3-201ENST00000262539 PCBD1P61457 104 aa7.49□□□□□ -1.21
PTPN3-201ENST00000262539 GALEQ14376 348 aa7.49□□□□□ -1.21
PTPN3-201ENST00000262539 CCNJQ5T5M9 372 aa7.49□□□□□ -1.21
PTPN3-201ENST00000262539 PEAR1Q5VY43 1037 aaPredicted RBP7.49□□□□□ -1.21
PTPN3-201ENST00000262539 SLC22A10Q63ZE4 541 aa7.49□□□□□ -1.21
PTPN3-201ENST00000262539 TMEM205Q6UW68 189 aa7.49□□□□□ -1.21
PTPN3-201ENST00000262539 TMPRSS12Q86WS5 348 aa7.49□□□□□ -1.21
PTPN3-201ENST00000262539 OR56B2PQ8NGI1 322 aa7.49□□□□□ -1.21
PTPN3-201ENST00000262539 SSX3Q99909 188 aa7.49□□□□□ -1.21
PTPN3-201ENST00000262539 DDA1Q9BW61 102 aa7.49□□□□□ -1.21
PTPN3-201ENST00000262539 LANCL2Q9NS86 450 aa7.49□□□□□ -1.21
PTPN3-201ENST00000262539 SURF4O15260 269 aa7.49□□□□□ -1.21
PTPN3-201ENST00000262539 CLN5O75503 358 aa7.49□□□□□ -1.21
PTPN3-201ENST00000262539 ZGLP1P0C6A0 271 aa7.49□□□□□ -1.21
PTPN3-201ENST00000262539 TNFRSF1BP20333 461 aa7.49□□□□□ -1.21
PTPN3-201ENST00000262539 SRP14P37108 136 aaKnown RBP7.49□□□□□ -1.21
PTPN3-201ENST00000262539 RPL27P61353 136 aaKnown RBP7.49□□□□□ -1.21
PTPN3-201ENST00000262539 RNF4P78317 190 aa7.49□□□□□ -1.21
PTPN3-201ENST00000262539 SSBP1Q04837 148 aaKnown RBP7.49□□□□□ -1.21
PTPN3-201ENST00000262539 EGR3Q06889 387 aa7.49□□□□□ -1.21
PTPN3-201ENST00000262539 MGAT2Q10469 447 aa7.49□□□□□ -1.21
PTPN3-201ENST00000262539 FCRLBQ6BAA4 426 aa7.49□□□□□ -1.21
PTPN3-201ENST00000262539 PXKQ7Z7A4 578 aa7.49□□□□□ -1.21
PTPN3-201ENST00000262539 SYT14Q8NB59 555 aa7.49□□□□□ -1.21
PTPN3-201ENST00000262539 M1APQ8TC57 530 aa7.49□□□□□ -1.21
PTPN3-201ENST00000262539 BEX2Q9BXY8 128 aa7.49□□□□□ -1.21
PTPN3-201ENST00000262539 WWTR1Q9GZV5 400 aa7.49□□□□□ -1.21
PTPN3-201ENST00000262539 BEX1Q9HBH7 125 aa7.49□□□□□ -1.21
PTPN3-201ENST00000262539 IGHV5-51A0A0C4DH38 117 aa7.49□□□□□ -1.21
PTPN3-201ENST00000262539 A0A0U1RQK1 487 aa7.49□□□□□ -1.21
PTPN3-201ENST00000262539 HRO43593 1189 aa7.49□□□□□ -1.21
PTPN3-201ENST00000262539 B3GALT4O96024 378 aa7.49□□□□□ -1.21
PTPN3-201ENST00000262539 OR1D4P47884 311 aa7.49□□□□□ -1.21
PTPN3-201ENST00000262539 CRMP1Q14194 572 aa7.49□□□□□ -1.21
PTPN3-201ENST00000262539 DEFB109BQ30KR1 87 aa7.49□□□□□ -1.21
PTPN3-201ENST00000262539 IL1F10Q8WWZ1 152 aa7.49□□□□□ -1.21
PTPN3-201ENST00000262539 VN1R1Q9GZP7 353 aa7.49□□□□□ -1.21
PTPN3-201ENST00000262539 C12orf49Q9H741 205 aa7.49□□□□□ -1.21
PTPN3-201ENST00000262539 ERVK13-1Q9NX77 482 aa7.49□□□□□ -1.21
PTPN3-201ENST00000262539 PILRBQ9UKJ0 227 aa7.49□□□□□ -1.21
PTPN3-201ENST00000262539 RBMX2Q9Y388 322 aaKnown RBP7.49□□□□□ -1.21
PTPN3-201ENST00000262539 K7ESF4 209 aa7.49□□□□□ -1.21
PTPN3-201ENST00000262539 EML2O95834 649 aa7.49□□□□□ -1.21
PTPN3-201ENST00000262539 WNT11O96014 354 aa7.49□□□□□ -1.21
PTPN3-201ENST00000262539 IGHG1P01857 330 aa7.49□□□□□ -1.21
PTPN3-201ENST00000262539 WNT1P04628 370 aa7.49□□□□□ -1.21
PTPN3-201ENST00000262539 UBBP0CG47 229 aa7.49□□□□□ -1.21
PTPN3-201ENST00000262539 UBCP0CG48 685 aaKnown RBP7.49□□□□□ -1.21
PTPN3-201ENST00000262539 PCMT1P22061 227 aa7.49□□□□□ -1.21
PTPN3-201ENST00000262539 RPS5P46782 204 aaKnown RBP7.49□□□□□ -1.21
PTPN3-201ENST00000262539 ZNF322Q6U7Q0 402 aaPredicted RBP7.49□□□□□ -1.21
PTPN3-201ENST00000262539 ZNF695Q8IW36 515 aa7.49□□□□□ -1.21
PTPN3-201ENST00000262539 NKAIN3Q8N8D7 197 aa7.49□□□□□ -1.21
PTPN3-201ENST00000262539 DTWD2Q8NBA8 298 aa7.49□□□□□ -1.21
PTPN3-201ENST00000262539 KCNE4Q8WWG9 221 aa7.49□□□□□ -1.21
PTPN3-201ENST00000262539 ZNF845Q96IR2 970 aaPredicted RBP7.49□□□□□ -1.21
PTPN3-201ENST00000262539 TMEM100Q9NV29 134 aa7.49□□□□□ -1.21
PTPN3-201ENST00000262539 VSX1Q9NZR4 365 aaPredicted RBP7.49□□□□□ -1.21
PTPN3-201ENST00000262539 ANKRD33BA6NCL7 494 aa7.49□□□□□ -1.21
PTPN3-201ENST00000262539 CPEP16870 476 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms