RNA–Protein interactions for RNA: ENST00000261443.9

CSDE1-201, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-201ENST00000261443 ST6GAL1P15907 406 aa6.57□□□□□ -1.36
CSDE1-201ENST00000261443 NDUFB7P17568 137 aa6.57□□□□□ -1.36
CSDE1-201ENST00000261443 MAOAP21397 527 aa6.57□□□□□ -1.36
CSDE1-201ENST00000261443 S100A2P29034 98 aa6.57□□□□□ -1.36
CSDE1-201ENST00000261443 DIO1P49895 249 aa6.57□□□□□ -1.36
CSDE1-201ENST00000261443 TAS2R60P59551 318 aa6.57□□□□□ -1.36
CSDE1-201ENST00000261443 SNRPNP63162 240 aaKnown RBP6.57□□□□□ -1.36
CSDE1-201ENST00000261443 SKP1P63208 163 aa6.57□□□□□ -1.36
CSDE1-201ENST00000261443 IL13RA1P78552 427 aa6.57□□□□□ -1.36
CSDE1-201ENST00000261443 HTRA3P83110 453 aa6.57□□□□□ -1.36
CSDE1-201ENST00000261443 PNLIPRP3Q17RR3 467 aa6.57□□□□□ -1.36
CSDE1-201ENST00000261443 ALG11Q2TAA5 492 aa6.57□□□□□ -1.36
CSDE1-201ENST00000261443 POM121L1PQ3SYA9 428 aa6.57□□□□□ -1.36
CSDE1-201ENST00000261443 ZNF585AQ6P3V2 769 aa6.57□□□□□ -1.36
CSDE1-201ENST00000261443 ARRDC1Q8N5I2 433 aa6.57□□□□□ -1.36
CSDE1-201ENST00000261443 FAM24BQ8N5W8 94 aa6.57□□□□□ -1.36
CSDE1-201ENST00000261443 AKR7LQ8NHP1 331 aa6.57□□□□□ -1.36
CSDE1-201ENST00000261443 RPS4Y2Q8TD47 263 aa6.57□□□□□ -1.36
CSDE1-201ENST00000261443 GRHL3Q8TE85 626 aa6.57□□□□□ -1.36
CSDE1-201ENST00000261443 KIRREL1Q96J84 757 aa6.57□□□□□ -1.36
CSDE1-201ENST00000261443 TAAR9Q96RI9 348 aa6.57□□□□□ -1.36
CSDE1-201ENST00000261443 MACROD1Q9BQ69 325 aa6.57□□□□□ -1.36
CSDE1-201ENST00000261443 OR2S2Q9NQN1 319 aa6.57□□□□□ -1.36
CSDE1-201ENST00000261443 CYTL1Q9NRR1 136 aa6.57□□□□□ -1.36
CSDE1-201ENST00000261443 MARCH5Q9NX47 278 aa6.57□□□□□ -1.36
CSDE1-201ENST00000261443 GFOD1Q9NXC2 390 aa6.57□□□□□ -1.36
CSDE1-201ENST00000261443 LSM7Q9UK45 103 aaKnown RBP6.57□□□□□ -1.36
CSDE1-201ENST00000261443 TIMM10BQ9Y5J6 103 aa6.57□□□□□ -1.36
CSDE1-201ENST00000261443 IER3IP1Q9Y5U9 82 aa6.57□□□□□ -1.36
CSDE1-201ENST00000261443 WIF1Q9Y5W5 379 aa6.57□□□□□ -1.36
CSDE1-201ENST00000261443 KPTNQ9Y664 436 aa6.57□□□□□ -1.36
CSDE1-201ENST00000261443 HEATR5BQ9P2D3 2071 aa6.57□□□□□ -1.36
CSDE1-201ENST00000261443 C9orf170A2RU37 121 aa6.57□□□□□ -1.36
CSDE1-201ENST00000261443 C7orf77A4D0Y5 90 aa6.57□□□□□ -1.36
CSDE1-201ENST00000261443 ZNF736B4DX44 427 aaPredicted RBP6.57□□□□□ -1.36
CSDE1-201ENST00000261443 M0R036 132 aa6.57□□□□□ -1.36
CSDE1-201ENST00000261443 TERTO14746 1132 aaKnown RBP6.57□□□□□ -1.36
CSDE1-201ENST00000261443 MED6O75586 246 aa6.57□□□□□ -1.36
CSDE1-201ENST00000261443 YIF1AO95070 293 aa6.57□□□□□ -1.36
CSDE1-201ENST00000261443 LYPD3O95274 346 aa6.57□□□□□ -1.36
CSDE1-201ENST00000261443 CD5P06127 495 aa6.57□□□□□ -1.36
CSDE1-201ENST00000261443 OR8G3PP0DMU2 310 aa6.57□□□□□ -1.36
CSDE1-201ENST00000261443 DAOP14920 347 aa6.57□□□□□ -1.36
CSDE1-201ENST00000261443 HLA-GP17693 338 aa6.57□□□□□ -1.36
CSDE1-201ENST00000261443 SLC11A1P49279 550 aa6.57□□□□□ -1.36
CSDE1-201ENST00000261443 GSK3AP49840 483 aa6.57□□□□□ -1.36
CSDE1-201ENST00000261443 RBP2P50120 134 aa6.57□□□□□ -1.36
CSDE1-201ENST00000261443 PPP1R1AQ13522 171 aa6.57□□□□□ -1.36
CSDE1-201ENST00000261443 CLINT1Q14677 625 aa6.57□□□□□ -1.36
CSDE1-201ENST00000261443 KCNAB1Q14722 419 aa6.57□□□□□ -1.36
CSDE1-201ENST00000261443 AWAT1Q58HT5 328 aa6.57□□□□□ -1.36
CSDE1-201ENST00000261443 MRPL2Q5T653 305 aaKnown RBP6.57□□□□□ -1.36
CSDE1-201ENST00000261443 FAM111BQ6SJ93 734 aa6.57□□□□□ -1.36
CSDE1-201ENST00000261443 ZNF627Q7L945 461 aa6.57□□□□□ -1.36
CSDE1-201ENST00000261443 TMEM150AQ86TG1 271 aa6.57□□□□□ -1.36
CSDE1-201ENST00000261443 BIVMQ86UB2 503 aa6.57□□□□□ -1.36
CSDE1-201ENST00000261443 RNASE11Q8TAA1 199 aaKnown RBP6.57□□□□□ -1.36
CSDE1-201ENST00000261443 CPNE4Q96A23 557 aaPredicted RBP6.57□□□□□ -1.36
CSDE1-201ENST00000261443 S100PBPQ96BU1 408 aa6.57□□□□□ -1.36
CSDE1-201ENST00000261443 SMIM8Q96KF7 97 aa6.57□□□□□ -1.36
CSDE1-201ENST00000261443 SSX3Q99909 188 aa6.57□□□□□ -1.36
CSDE1-201ENST00000261443 ZNF426Q9BUY5 554 aa6.57□□□□□ -1.36
CSDE1-201ENST00000261443 FN3KRPQ9HA64 309 aa6.57□□□□□ -1.36
CSDE1-201ENST00000261443 SPTBP11277 2137 aa6.57□□□□□ -1.36
CSDE1-201ENST00000261443 TBC1D3KA0A087X1G2 549 aa6.56□□□□□ -1.36
CSDE1-201ENST00000261443 URADA6NGE7 173 aa6.56□□□□□ -1.36
CSDE1-201ENST00000261443 P2RX6O15547 441 aa6.56□□□□□ -1.36
CSDE1-201ENST00000261443 ERI3O43414 337 aaKnown RBP6.56□□□□□ -1.36
CSDE1-201ENST00000261443 LILRB5O75023 590 aa6.56□□□□□ -1.36
CSDE1-201ENST00000261443 AIFM1O95831 613 aa6.56□□□□□ -1.36
CSDE1-201ENST00000261443 CRHP06850 196 aa6.56□□□□□ -1.36
CSDE1-201ENST00000261443 TACSTD2P09758 323 aa6.56□□□□□ -1.36
CSDE1-201ENST00000261443 FBXO45P0C2W1 286 aa6.56□□□□□ -1.36
CSDE1-201ENST00000261443 ELFN1P0C7U0 828 aa6.56□□□□□ -1.36
CSDE1-201ENST00000261443 CKBP12277 381 aa6.56□□□□□ -1.36
CSDE1-201ENST00000261443 ZNF28P17035 718 aa6.56□□□□□ -1.36
CSDE1-201ENST00000261443 VAMP1P23763 118 aa6.56□□□□□ -1.36
CSDE1-201ENST00000261443 ZBTB25P24278 435 aa6.56□□□□□ -1.36
CSDE1-201ENST00000261443 PBX2P40425 430 aa6.56□□□□□ -1.36
CSDE1-201ENST00000261443 LPAR6P43657 344 aa6.56□□□□□ -1.36
CSDE1-201ENST00000261443 DUSP8Q13202 625 aa6.56□□□□□ -1.36
CSDE1-201ENST00000261443 NKPD1Q17RQ9 610 aa6.56□□□□□ -1.36
CSDE1-201ENST00000261443 C2orf76Q3KRA6 126 aa6.56□□□□□ -1.36
CSDE1-201ENST00000261443 CDPF1Q6NVV7 123 aa6.56□□□□□ -1.36
CSDE1-201ENST00000261443 FAM220AQ7Z4H9 259 aa6.56□□□□□ -1.36
CSDE1-201ENST00000261443 CMTM8Q8IZV2 173 aa6.56□□□□□ -1.36
CSDE1-201ENST00000261443 ZNF417Q8TAU3 575 aa6.56□□□□□ -1.36
CSDE1-201ENST00000261443 MITD1Q8WV92 249 aa6.56□□□□□ -1.36
CSDE1-201ENST00000261443 SECTM1Q8WVN6 248 aa6.56□□□□□ -1.36
CSDE1-201ENST00000261443 CCDC74AQ96AQ1 378 aa6.56□□□□□ -1.36
CSDE1-201ENST00000261443 SEH1LQ96EE3 360 aa6.56□□□□□ -1.36
CSDE1-201ENST00000261443 MARS2Q96GW9 593 aaKnown RBP6.56□□□□□ -1.36
CSDE1-201ENST00000261443 IP6K3Q96PC2 410 aa6.56□□□□□ -1.36
CSDE1-201ENST00000261443 RGCCQ9H4X1 137 aa6.56□□□□□ -1.36
CSDE1-201ENST00000261443 EPHX3Q9H6B9 360 aa6.56□□□□□ -1.36
CSDE1-201ENST00000261443 C6orf106Q9H6K1 298 aaPredicted RBP6.56□□□□□ -1.36
CSDE1-201ENST00000261443 TUBA4BQ9H853 241 aa6.56□□□□□ -1.36
CSDE1-201ENST00000261443 SERTAD3Q9UJW9 196 aa6.56□□□□□ -1.36
CSDE1-201ENST00000261443 VSIG4Q9Y279 399 aa6.56□□□□□ -1.36
CSDE1-201ENST00000261443 YBX2Q9Y2T7 364 aaKnown RBP6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms