RNA–Protein interactions for RNA: ENST00000261415.11

COL4A3BP-201, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 1 (best) BASIC

Gene COL4A3BP, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-201ENST00000261415 NXF5Q9H1B4 397 aaKnown RBP17.14■□□□□ 0.33
COL4A3BP-201ENST00000261415 ACER3Q9NUN7 267 aa17.14■□□□□ 0.33
COL4A3BP-201ENST00000261415 IGHV1-45A0A0A0MS14 117 aa17.14■□□□□ 0.33
COL4A3BP-201ENST00000261415 SIX6O95475 246 aa17.14■□□□□ 0.33
COL4A3BP-201ENST00000261415 GASTP01350 101 aa17.14■□□□□ 0.33
COL4A3BP-201ENST00000261415 IGHEP01854 428 aa17.14■□□□□ 0.33
COL4A3BP-201ENST00000261415 HPXP02790 462 aa17.14■□□□□ 0.33
COL4A3BP-201ENST00000261415 CPN1P15169 458 aa17.14■□□□□ 0.33
COL4A3BP-201ENST00000261415 PAICSP22234 425 aaKnown RBP17.14■□□□□ 0.33
COL4A3BP-201ENST00000261415 DLSTP36957 453 aa17.14■□□□□ 0.33
COL4A3BP-201ENST00000261415 SRP9P49458 86 aaKnown RBP17.14■□□□□ 0.33
COL4A3BP-201ENST00000261415 GPR32P1Q8NGA4 272 aa17.14■□□□□ 0.33
COL4A3BP-201ENST00000261415 EDARADDQ8WWZ3 215 aa17.14■□□□□ 0.33
COL4A3BP-201ENST00000261415 CHIAQ9BZP6 476 aa17.14■□□□□ 0.33
COL4A3BP-201ENST00000261415 SEBOXQ9HB31 216 aaPredicted RBP17.14■□□□□ 0.33
COL4A3BP-201ENST00000261415 ASCL3Q9NQ33 180 aa17.14■□□□□ 0.33
COL4A3BP-201ENST00000261415 PCSK5Q92824 1860 aa17.14■□□□□ 0.33
COL4A3BP-201ENST00000261415 DOCK10Q96BY6 2186 aa17.13■□□□□ 0.33
COL4A3BP-201ENST00000261415 FRG2CA6NGY1 282 aa17.13■□□□□ 0.33
COL4A3BP-201ENST00000261415 DBX1A6NMT0 343 aa17.13■□□□□ 0.33
COL4A3BP-201ENST00000261415 C21orf140B9A014 251 aa17.13■□□□□ 0.33
COL4A3BP-201ENST00000261415 TERTO14746 1132 aaKnown RBP17.13■□□□□ 0.33
COL4A3BP-201ENST00000261415 SC5DO75845 299 aa17.13■□□□□ 0.33
COL4A3BP-201ENST00000261415 NCR1O76036 304 aa17.13■□□□□ 0.33
COL4A3BP-201ENST00000261415 ADAP00813 363 aa17.13■□□□□ 0.33
COL4A3BP-201ENST00000261415 IGKV1D-16P01601 117 aa17.13■□□□□ 0.33
COL4A3BP-201ENST00000261415 COX6A1P12074 109 aa17.13■□□□□ 0.33
COL4A3BP-201ENST00000261415 TNFRSF1BP20333 461 aa17.13■□□□□ 0.33
COL4A3BP-201ENST00000261415 DRD5P21918 477 aa17.13■□□□□ 0.33
COL4A3BP-201ENST00000261415 MAPK3P27361 379 aaPredicted RBP17.13■□□□□ 0.33
COL4A3BP-201ENST00000261415 CD82P27701 267 aa17.13■□□□□ 0.33
COL4A3BP-201ENST00000261415 RAB5BP61020 215 aa17.13■□□□□ 0.33
COL4A3BP-201ENST00000261415 DCAF7P61962 342 aa17.13■□□□□ 0.33
COL4A3BP-201ENST00000261415 HLA-DQA1Q5Y7H0 255 aa17.13■□□□□ 0.33
COL4A3BP-201ENST00000261415 ZAR1Q86SH2 424 aa17.13■□□□□ 0.33
COL4A3BP-201ENST00000261415 ZNF619Q8N2I2 560 aa17.13■□□□□ 0.33
COL4A3BP-201ENST00000261415 TMEM41AQ96HV5 264 aa17.13■□□□□ 0.33
COL4A3BP-201ENST00000261415 IFT27Q9BW83 186 aa17.13■□□□□ 0.33
COL4A3BP-201ENST00000261415 NRSN2Q9GZP1 204 aa17.13■□□□□ 0.33
COL4A3BP-201ENST00000261415 MTHFD2LQ9H903 347 aaPredicted RBP17.13■□□□□ 0.33
COL4A3BP-201ENST00000261415 TESQ9UGI8 421 aaKnown RBP17.13■□□□□ 0.33
COL4A3BP-201ENST00000261415 FZD7O75084 574 aa17.13■□□□□ 0.33
COL4A3BP-201ENST00000261415 SFTPCP11686 197 aa17.13■□□□□ 0.33
COL4A3BP-201ENST00000261415 NPR2P20594 1047 aa17.13■□□□□ 0.33
COL4A3BP-201ENST00000261415 GALP22466 123 aa17.13■□□□□ 0.33
COL4A3BP-201ENST00000261415 RNF4P78317 190 aa17.13■□□□□ 0.33
COL4A3BP-201ENST00000261415 SLC25A30Q5SVS4 291 aa17.13■□□□□ 0.33
COL4A3BP-201ENST00000261415 IGF2-ASQ6U949 168 aa17.13■□□□□ 0.33
COL4A3BP-201ENST00000261415 KIRREL2Q6UWL6 708 aa17.13■□□□□ 0.33
COL4A3BP-201ENST00000261415 LDLRAD3Q86YD5 345 aa17.13■□□□□ 0.33
COL4A3BP-201ENST00000261415 ARMC10Q8N2F6 343 aa17.13■□□□□ 0.33
COL4A3BP-201ENST00000261415 BCORP1Q8N888 145 aa17.13■□□□□ 0.33
COL4A3BP-201ENST00000261415 GTF3AQ92664 365 aaKnown RBP17.13■□□□□ 0.33
COL4A3BP-201ENST00000261415 LMF1Q96S06 567 aa17.13■□□□□ 0.33
COL4A3BP-201ENST00000261415 DMRTA2Q96SC8 542 aa17.13■□□□□ 0.33
COL4A3BP-201ENST00000261415 GPR87Q9BY21 358 aa17.13■□□□□ 0.33
COL4A3BP-201ENST00000261415 ARL6Q9H0F7 186 aa17.13■□□□□ 0.33
COL4A3BP-201ENST00000261415 ZNF700Q9H0M5 742 aa17.13■□□□□ 0.33
COL4A3BP-201ENST00000261415 PIPOXQ9P0Z9 390 aa17.13■□□□□ 0.33
COL4A3BP-201ENST00000261415 MGAT4CQ9UBM8 478 aa17.13■□□□□ 0.33
COL4A3BP-201ENST00000261415 LOC101059948A0A1B0GTJ6 334 aa17.12■□□□□ 0.33
COL4A3BP-201ENST00000261415 SOCS6O14544 535 aa17.12■□□□□ 0.33
COL4A3BP-201ENST00000261415 PTGFRP43088 359 aa17.12■□□□□ 0.33
COL4A3BP-201ENST00000261415 OR1E2P47887 323 aa17.12■□□□□ 0.33
COL4A3BP-201ENST00000261415 DYRK1AQ13627 763 aa17.12■□□□□ 0.33
COL4A3BP-201ENST00000261415 TMEM88Q6PEY1 159 aa17.12■□□□□ 0.33
COL4A3BP-201ENST00000261415 SIAH3Q8IW03 269 aa17.12■□□□□ 0.33
COL4A3BP-201ENST00000261415 FAM26EQ8N5C1 309 aa17.12■□□□□ 0.33
COL4A3BP-201ENST00000261415 ARIH2OSQ8N7S6 290 aa17.12■□□□□ 0.33
COL4A3BP-201ENST00000261415 ZNF441Q8N8Z8 693 aa17.12■□□□□ 0.33
COL4A3BP-201ENST00000261415 C2CD4CQ8TF44 421 aa17.12■□□□□ 0.33
COL4A3BP-201ENST00000261415 GEMIN6Q8WXD5 167 aaKnown RBP17.12■□□□□ 0.33
COL4A3BP-201ENST00000261415 NMNAT1Q9HAN9 279 aaPredicted RBP17.12■□□□□ 0.33
COL4A3BP-201ENST00000261415 NPIPA5A0A0B4J1W7 369 aa17.12■□□□□ 0.33
COL4A3BP-201ENST00000261415 TRBV11-1A0A0K0K1C0 115 aa17.12■□□□□ 0.33
COL4A3BP-201ENST00000261415 CENPVL1A0A0U1RR11 272 aa17.12■□□□□ 0.33
COL4A3BP-201ENST00000261415 DCDC2BA2VCK2 349 aa17.12■□□□□ 0.33
COL4A3BP-201ENST00000261415 NPIPA7E9PJI5 369 aa17.12■□□□□ 0.33
COL4A3BP-201ENST00000261415 OR2A4O95047 310 aa17.12■□□□□ 0.33
COL4A3BP-201ENST00000261415 CRYBA1P05813 215 aa17.12■□□□□ 0.33
COL4A3BP-201ENST00000261415 GUSBP08236 651 aa17.12■□□□□ 0.33
COL4A3BP-201ENST00000261415 NPIPA8P0DM63 369 aa17.12■□□□□ 0.33
COL4A3BP-201ENST00000261415 CCR6P51684 374 aa17.12■□□□□ 0.33
COL4A3BP-201ENST00000261415 PITPNAQ00169 270 aa17.12■□□□□ 0.33
COL4A3BP-201ENST00000261415 ECH1Q13011 328 aa17.12■□□□□ 0.33
COL4A3BP-201ENST00000261415 SSPNQ14714 243 aa17.12■□□□□ 0.33
COL4A3BP-201ENST00000261415 EIF2S3LQ2VIR3 472 aaKnown RBP17.12■□□□□ 0.33
COL4A3BP-201ENST00000261415 ZNF311Q5JNZ3 666 aa17.12■□□□□ 0.33
COL4A3BP-201ENST00000261415 HBMQ6B0K9 141 aa17.12■□□□□ 0.33
COL4A3BP-201ENST00000261415 PPP1R32Q7Z5V6 425 aa17.12■□□□□ 0.33
COL4A3BP-201ENST00000261415 VRK2Q86Y07 508 aa17.12■□□□□ 0.33
COL4A3BP-201ENST00000261415 C17orf47Q8NEP4 570 aa17.12■□□□□ 0.33
COL4A3BP-201ENST00000261415 OR11G2Q8NGC1 345 aa17.12■□□□□ 0.33
COL4A3BP-201ENST00000261415 APOBEC4Q8WW27 367 aaKnown RBP17.12■□□□□ 0.33
COL4A3BP-201ENST00000261415 GATAD2BQ8WXI9 593 aa17.12■□□□□ 0.33
COL4A3BP-201ENST00000261415 NKD1Q969G9 470 aa17.12■□□□□ 0.33
COL4A3BP-201ENST00000261415 ZNF354BQ96LW1 612 aa17.12■□□□□ 0.33
COL4A3BP-201ENST00000261415 OR2A7Q96R45 310 aa17.12■□□□□ 0.33
COL4A3BP-201ENST00000261415 G6PC3Q9BUM1 346 aa17.12■□□□□ 0.33
COL4A3BP-201ENST00000261415 C20orf85Q9H1P6 137 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms