RNA–Protein interactions for RNA: ENST00000254644.12

MRPL35-201, Transcript of mitochondrial ribosomal protein L35, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene MRPL35, Length 1,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL35-201ENST00000254644 ZNF347Q96SE7 839 aa11.13□□□□□ -0.63
MRPL35-201ENST00000254644 NANOGQ9H9S0 305 aa11.13□□□□□ -0.63
MRPL35-201ENST00000254644 HIF1ANQ9NWT6 349 aa11.13□□□□□ -0.63
MRPL35-201ENST00000254644 NPIPB13A6NJU9 1138 aa11.12□□□□□ -0.63
MRPL35-201ENST00000254644 NPIPB4C9JG80 1138 aa11.12□□□□□ -0.63
MRPL35-201ENST00000254644 KPNA4O00629 521 aaPredicted RBP11.12□□□□□ -0.63
MRPL35-201ENST00000254644 EDF1O60869 148 aaKnown RBP11.12□□□□□ -0.63
MRPL35-201ENST00000254644 TRMUO75648 421 aaKnown RBP11.12□□□□□ -0.63
MRPL35-201ENST00000254644 PTHP01270 115 aa11.12□□□□□ -0.63
MRPL35-201ENST00000254644 FAM157BP0CG42 384 aa11.12□□□□□ -0.63
MRPL35-201ENST00000254644 ACADSP16219 412 aa11.12□□□□□ -0.63
MRPL35-201ENST00000254644 FUT1P19526 365 aa11.12□□□□□ -0.63
MRPL35-201ENST00000254644 LSP1P33241 339 aa11.12□□□□□ -0.63
MRPL35-201ENST00000254644 RBM34P42696 430 aaKnown RBP11.12□□□□□ -0.63
MRPL35-201ENST00000254644 CRYBB2P43320 205 aa11.12□□□□□ -0.63
MRPL35-201ENST00000254644 RAD52P43351 418 aa11.12□□□□□ -0.63
MRPL35-201ENST00000254644 UCP2P55851 309 aa11.12□□□□□ -0.63
MRPL35-201ENST00000254644 ERVS71-1P61550 626 aa11.12□□□□□ -0.63
MRPL35-201ENST00000254644 NFYCQ13952 458 aa11.12□□□□□ -0.63
MRPL35-201ENST00000254644 ARMC4Q5T2S8 1044 aa11.12□□□□□ -0.63
MRPL35-201ENST00000254644 TMEM53Q6P2H8 277 aa11.12□□□□□ -0.63
MRPL35-201ENST00000254644 NKAIN4Q8IVV8 208 aa11.12□□□□□ -0.63
MRPL35-201ENST00000254644 CPEB3Q8NE35 698 aaKnown RBP11.12□□□□□ -0.63
MRPL35-201ENST00000254644 SEMA6DQ8NFY4 1073 aa11.12□□□□□ -0.63
MRPL35-201ENST00000254644 SYNPRQ8TBG9 265 aa11.12□□□□□ -0.63
MRPL35-201ENST00000254644 ZFAND2BQ8WV99 257 aa11.12□□□□□ -0.63
MRPL35-201ENST00000254644 DYDC1Q8WWB3 177 aa11.12□□□□□ -0.63
MRPL35-201ENST00000254644 SIKE1Q9BRV8 207 aa11.12□□□□□ -0.63
MRPL35-201ENST00000254644 ZNF416Q9BWM5 594 aa11.12□□□□□ -0.63
MRPL35-201ENST00000254644 BCL2L14Q9BZR8 327 aa11.12□□□□□ -0.63
MRPL35-201ENST00000254644 POLR2J2Q9GZM3 115 aaKnown RBP11.12□□□□□ -0.63
MRPL35-201ENST00000254644 POLR2J3Q9H1A7 115 aaKnown RBP11.12□□□□□ -0.63
MRPL35-201ENST00000254644 HINT3Q9NQE9 182 aaKnown RBP11.12□□□□□ -0.63
MRPL35-201ENST00000254644 C20orf141Q9NUB4 165 aa11.12□□□□□ -0.63
MRPL35-201ENST00000254644 INTS9Q9NV88 658 aaKnown RBP11.12□□□□□ -0.63
MRPL35-201ENST00000254644 TREM2Q9NZC2 230 aa11.12□□□□□ -0.63
MRPL35-201ENST00000254644 TAAR3PQ9P1P4 343 aa11.12□□□□□ -0.63
MRPL35-201ENST00000254644 METRNQ9UJH8 293 aa11.12□□□□□ -0.63
MRPL35-201ENST00000254644 UGT2A1Q9Y4X1 527 aa11.12□□□□□ -0.63
MRPL35-201ENST00000254644 A0A1W2PPW3 197 aa11.11□□□□□ -0.63
MRPL35-201ENST00000254644 BLOC1S5-TXNDC5H3BN57 136 aa11.11□□□□□ -0.63
MRPL35-201ENST00000254644 FXYD1O00168 92 aa11.11□□□□□ -0.63
MRPL35-201ENST00000254644 VENTXO95231 258 aa11.11□□□□□ -0.63
MRPL35-201ENST00000254644 IGHV3-13P01766 116 aa11.11□□□□□ -0.63
MRPL35-201ENST00000254644 F13BP05160 661 aa11.11□□□□□ -0.63
MRPL35-201ENST00000254644 KLF3P57682 345 aaPredicted RBP11.11□□□□□ -0.63
MRPL35-201ENST00000254644 CLRN1P58418 232 aa11.11□□□□□ -0.63
MRPL35-201ENST00000254644 MRPS34P82930 218 aaKnown RBP11.11□□□□□ -0.63
MRPL35-201ENST00000254644 TBC1D28Q2M2D7 210 aa11.11□□□□□ -0.63
MRPL35-201ENST00000254644 PCGF3Q3KNV8 242 aa11.11□□□□□ -0.63
MRPL35-201ENST00000254644 TMEM255AQ5JRV8 349 aa11.11□□□□□ -0.63
MRPL35-201ENST00000254644 RINLQ6ZS11 566 aa11.11□□□□□ -0.63
MRPL35-201ENST00000254644 C1orf229Q6ZS94 237 aaPredicted RBP11.11□□□□□ -0.63
MRPL35-201ENST00000254644 SLC16A14Q7RTX9 510 aa11.11□□□□□ -0.63
MRPL35-201ENST00000254644 NANOGNBQ7Z5D8 188 aa11.11□□□□□ -0.63
MRPL35-201ENST00000254644 NOXO1Q8NFA2 376 aa11.11□□□□□ -0.63
MRPL35-201ENST00000254644 OR1J2Q8NGS2 313 aa11.11□□□□□ -0.63
MRPL35-201ENST00000254644 SLC26A7Q8TE54 656 aa11.11□□□□□ -0.63
MRPL35-201ENST00000254644 C11orf40Q8WZ69 217 aa11.11□□□□□ -0.63
MRPL35-201ENST00000254644 NABP1Q96AH0 204 aa11.11□□□□□ -0.63
MRPL35-201ENST00000254644 THOC1Q96FV9 657 aaKnown RBP11.11□□□□□ -0.63
MRPL35-201ENST00000254644 SIAEQ9HAT2 523 aa11.11□□□□□ -0.63
MRPL35-201ENST00000254644 SMURF2Q9HAU4 748 aa11.11□□□□□ -0.63
MRPL35-201ENST00000254644 CDH20Q9HBT6 801 aa11.11□□□□□ -0.63
MRPL35-201ENST00000254644 G6PC2Q9NQR9 355 aa11.11□□□□□ -0.63
MRPL35-201ENST00000254644 SLCO1C1Q9NYB5 712 aa11.11□□□□□ -0.63
MRPL35-201ENST00000254644 GPR160Q9UJ42 338 aa11.11□□□□□ -0.63
MRPL35-201ENST00000254644 SH3GLB1Q9Y371 365 aa11.11□□□□□ -0.63
MRPL35-201ENST00000254644 IGKV1D-43A0A0B4J1Z2 117 aa11.1□□□□□ -0.63
MRPL35-201ENST00000254644 A0A1W2PRG6 482 aa11.1□□□□□ -0.63
MRPL35-201ENST00000254644 HMGB1P1B2RPK0 211 aaPredicted RBP11.1□□□□□ -0.63
MRPL35-201ENST00000254644 PPIHO43447 177 aaKnown RBP11.1□□□□□ -0.63
MRPL35-201ENST00000254644 ICMTO60725 284 aa11.1□□□□□ -0.63
MRPL35-201ENST00000254644 DEAF1O75398 565 aaPredicted RBP11.1□□□□□ -0.63
MRPL35-201ENST00000254644 OR7A10O76100 309 aa11.1□□□□□ -0.63
MRPL35-201ENST00000254644 OR5F1O95221 314 aa11.1□□□□□ -0.63
MRPL35-201ENST00000254644 NPPAP01160 153 aa11.1□□□□□ -0.63
MRPL35-201ENST00000254644 UMPSP11172 480 aa11.1□□□□□ -0.63
MRPL35-201ENST00000254644 AQP2P41181 271 aa11.1□□□□□ -0.63
MRPL35-201ENST00000254644 ZNF84P51523 738 aa11.1□□□□□ -0.63
MRPL35-201ENST00000254644 SELENOVP59797 346 aa11.1□□□□□ -0.63
MRPL35-201ENST00000254644 CCL8P80075 99 aa11.1□□□□□ -0.63
MRPL35-201ENST00000254644 MYBPC1Q00872 1141 aa11.1□□□□□ -0.63
MRPL35-201ENST00000254644 CYLC2Q14093 348 aaPredicted RBP11.1□□□□□ -0.63
MRPL35-201ENST00000254644 NKPD1Q17RQ9 610 aa11.1□□□□□ -0.63
MRPL35-201ENST00000254644 ALKBH6Q3KRA9 238 aa11.1□□□□□ -0.63
MRPL35-201ENST00000254644 RABL3Q5HYI8 236 aa11.1□□□□□ -0.63
MRPL35-201ENST00000254644 COQ5Q5HYK3 327 aa11.1□□□□□ -0.63
MRPL35-201ENST00000254644 SLC25A47Q6Q0C1 308 aa11.1□□□□□ -0.63
MRPL35-201ENST00000254644 HDDC2Q7Z4H3 204 aa11.1□□□□□ -0.63
MRPL35-201ENST00000254644 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.1□□□□□ -0.63
MRPL35-201ENST00000254644 SYT14Q8NB59 555 aa11.1□□□□□ -0.63
MRPL35-201ENST00000254644 RBM15BQ8NDT2 890 aaKnown RBP11.1□□□□□ -0.63
MRPL35-201ENST00000254644 OR8J3Q8NGG0 315 aa11.1□□□□□ -0.63
MRPL35-201ENST00000254644 OR51F2Q8NH61 342 aa11.1□□□□□ -0.63
MRPL35-201ENST00000254644 PFN4Q8NHR9 129 aa11.1□□□□□ -0.63
MRPL35-201ENST00000254644 TMEM255BQ8WV15 326 aa11.1□□□□□ -0.63
MRPL35-201ENST00000254644 HDAC2Q92769 488 aaKnown RBP11.1□□□□□ -0.63
MRPL35-201ENST00000254644 LRRC58Q96CX6 371 aa11.1□□□□□ -0.63
MRPL35-201ENST00000254644 POM121L2Q96KW2 1035 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms