RNA–Protein interactions for RNA: ENST00000249837.7

VPS13C-201, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VPS13C, Length 13,300 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-201ENST00000249837 MR1Q95460 341 aa4.22□□□□□ -1.73
VPS13C-201ENST00000249837 RSPRY1Q96DX4 576 aa4.22□□□□□ -1.73
VPS13C-201ENST00000249837 MRI1Q9BV20 369 aa4.22□□□□□ -1.73
VPS13C-201ENST00000249837 SLC2A4RGQ9NR83 387 aa4.22□□□□□ -1.73
VPS13C-201ENST00000249837 GLS2Q9UI32 602 aa4.22□□□□□ -1.73
VPS13C-201ENST00000249837 UBE2J1Q9Y385 318 aaPredicted RBP4.22□□□□□ -1.73
VPS13C-201ENST00000249837 ETV7Q9Y603 341 aa4.22□□□□□ -1.73
VPS13C-201ENST00000249837 ARHGAP21Q5T5U3 1957 aa4.22□□□□□ -1.73
VPS13C-201ENST00000249837 NPIPA2E9PIF3 369 aa4.22□□□□□ -1.73
VPS13C-201ENST00000249837 NPIPA3F8WFD2 350 aa4.22□□□□□ -1.73
VPS13C-201ENST00000249837 FBXO24O75426 580 aa4.22□□□□□ -1.73
VPS13C-201ENST00000249837 MED6O75586 246 aa4.22□□□□□ -1.73
VPS13C-201ENST00000249837 IL32P24001 234 aa4.22□□□□□ -1.73
VPS13C-201ENST00000249837 S100A2P29034 98 aa4.22□□□□□ -1.73
VPS13C-201ENST00000249837 S100GP29377 79 aa4.22□□□□□ -1.73
VPS13C-201ENST00000249837 SMUG1Q53HV7 270 aa4.22□□□□□ -1.73
VPS13C-201ENST00000249837 ZBTB37Q5TC79 503 aa4.22□□□□□ -1.73
VPS13C-201ENST00000249837 ZNF770Q6IQ21 691 aaPredicted RBP4.22□□□□□ -1.73
VPS13C-201ENST00000249837 MEX3BQ6ZN04 569 aaKnown RBP4.22□□□□□ -1.73
VPS13C-201ENST00000249837 ABHD12BQ7Z5M8 362 aaPredicted RBP4.22□□□□□ -1.73
VPS13C-201ENST00000249837 SLC38A6Q8IZM9 456 aa4.22□□□□□ -1.73
VPS13C-201ENST00000249837 OR5D18Q8NGL1 313 aa4.22□□□□□ -1.73
VPS13C-201ENST00000249837 ST8SIA2Q92186 375 aa4.22□□□□□ -1.73
VPS13C-201ENST00000249837 EVA1AQ9H8M9 152 aa4.22□□□□□ -1.73
VPS13C-201ENST00000249837 CTSVO60911 334 aa4.22□□□□□ -1.73
VPS13C-201ENST00000249837 OLFM2O95897 454 aa4.22□□□□□ -1.73
VPS13C-201ENST00000249837 TPOP07202 933 aa4.22□□□□□ -1.73
VPS13C-201ENST00000249837 NPY4RP50391 375 aa4.22□□□□□ -1.73
VPS13C-201ENST00000249837 RPS27AP62979 156 aaKnown RBP4.22□□□□□ -1.73
VPS13C-201ENST00000249837 UBA52P62987 128 aaKnown RBP4.22□□□□□ -1.73
VPS13C-201ENST00000249837 TMEM240Q5SV17 173 aa4.22□□□□□ -1.73
VPS13C-201ENST00000249837 PARM1Q6UWI2 310 aa4.22□□□□□ -1.73
VPS13C-201ENST00000249837 MAMSTRQ6ZN01 415 aa4.22□□□□□ -1.73
VPS13C-201ENST00000249837 MED25Q71SY5 747 aa4.22□□□□□ -1.73
VPS13C-201ENST00000249837 COX15Q7KZN9 410 aa4.22□□□□□ -1.73
VPS13C-201ENST00000249837 ZFP82Q8N141 532 aa4.22□□□□□ -1.73
VPS13C-201ENST00000249837 ZNF687Q8N1G0 1237 aa4.22□□□□□ -1.73
VPS13C-201ENST00000249837 C16orf52Q8NHV5 167 aa4.22□□□□□ -1.73
VPS13C-201ENST00000249837 KCNG2Q9UJ96 466 aa4.22□□□□□ -1.73
VPS13C-201ENST00000249837 KCND3Q9UK17 655 aa4.22□□□□□ -1.73
VPS13C-201ENST00000249837 KIR2DS5A0A0G2JLQ3 304 aa4.21□□□□□ -1.73
VPS13C-201ENST00000249837 A0A0G2JNG1 304 aa4.21□□□□□ -1.73
VPS13C-201ENST00000249837 TSPAN11A1L157 253 aa4.21□□□□□ -1.73
VPS13C-201ENST00000249837 KIR2DS3K7RE56 304 aa4.21□□□□□ -1.73
VPS13C-201ENST00000249837 GIPP09681 153 aaPredicted RBP4.21□□□□□ -1.73
VPS13C-201ENST00000249837 RAB6AP20340 208 aa4.21□□□□□ -1.73
VPS13C-201ENST00000249837 CLDN6P56747 220 aa4.21□□□□□ -1.73
VPS13C-201ENST00000249837 KIR2DS5Q14953 304 aa4.21□□□□□ -1.73
VPS13C-201ENST00000249837 FAM189A2Q15884 450 aa4.21□□□□□ -1.73
VPS13C-201ENST00000249837 NKAIN2Q5VXU1 208 aa4.21□□□□□ -1.73
VPS13C-201ENST00000249837 FAM57BQ71RH2 274 aa4.21□□□□□ -1.73
VPS13C-201ENST00000249837 TSEN54Q7Z6J9 526 aaKnown RBP4.21□□□□□ -1.73
VPS13C-201ENST00000249837 OR5T2Q8NGG2 359 aa4.21□□□□□ -1.73
VPS13C-201ENST00000249837 PHYHIPQ92561 330 aa4.21□□□□□ -1.73
VPS13C-201ENST00000249837 DAZLQ92904 295 aaKnown RBP4.21□□□□□ -1.73
VPS13C-201ENST00000249837 PRRT1Q99946 306 aa4.21□□□□□ -1.73
VPS13C-201ENST00000249837 NAA11Q9BSU3 229 aaPredicted RBP4.21□□□□□ -1.73
VPS13C-201ENST00000249837 RPP25Q9BUL9 199 aaKnown RBP4.21□□□□□ -1.73
VPS13C-201ENST00000249837 TMEM231Q9H6L2 316 aa4.21□□□□□ -1.73
VPS13C-201ENST00000249837 FAM221BA6H8Z2 402 aa4.21□□□□□ -1.73
VPS13C-201ENST00000249837 OR5H14A6NHG9 310 aa4.21□□□□□ -1.73
VPS13C-201ENST00000249837 C1orf196B1AJZ1 125 aa4.21□□□□□ -1.73
VPS13C-201ENST00000249837 GABARAPH6UMI1 98 aa4.21□□□□□ -1.73
VPS13C-201ENST00000249837 GREM1O60565 184 aa4.21□□□□□ -1.73
VPS13C-201ENST00000249837 ADH6P28332 368 aa4.21□□□□□ -1.73
VPS13C-201ENST00000249837 ADPRHP54922 357 aa4.21□□□□□ -1.73
VPS13C-201ENST00000249837 TMEM91Q6ZNR0 172 aa4.21□□□□□ -1.73
VPS13C-201ENST00000249837 ADGRE4PQ86SQ3 457 aa4.21□□□□□ -1.73
VPS13C-201ENST00000249837 ANGPTL5Q86XS5 388 aa4.21□□□□□ -1.73
VPS13C-201ENST00000249837 C9orf62Q8N4C0 152 aa4.21□□□□□ -1.73
VPS13C-201ENST00000249837 EIF5A2Q9GZV4 153 aaKnown RBP4.21□□□□□ -1.73
VPS13C-201ENST00000249837 PARP12Q9H0J9 701 aaKnown RBP4.21□□□□□ -1.73
VPS13C-201ENST00000249837 TCEAL2Q9H3H9 227 aaPredicted RBP4.21□□□□□ -1.73
VPS13C-201ENST00000249837 F5H5K5 113 aa4.21□□□□□ -1.74
VPS13C-201ENST00000249837 TPMTP51580 245 aa4.21□□□□□ -1.74
VPS13C-201ENST00000249837 DHRS9Q9BPW9 319 aa4.21□□□□□ -1.74
VPS13C-201ENST00000249837 DKKL1Q9UK85 242 aa4.21□□□□□ -1.74
VPS13C-201ENST00000249837 ATRXP46100 2492 aa4.21□□□□□ -1.74
VPS13C-201ENST00000249837 MEIKINA0A087WXM9 373 aa4.21□□□□□ -1.74
VPS13C-201ENST00000249837 GLSO94925 669 aaPredicted RBP4.21□□□□□ -1.74
VPS13C-201ENST00000249837 TUBG1P23258 451 aa4.21□□□□□ -1.74
VPS13C-201ENST00000249837 DHPSP49366 369 aaPredicted RBP4.21□□□□□ -1.74
VPS13C-201ENST00000249837 SELENOPP49908 381 aa4.21□□□□□ -1.74
VPS13C-201ENST00000249837 MLF2Q15773 248 aaPredicted RBP4.21□□□□□ -1.74
VPS13C-201ENST00000249837 OR13H1Q8NG92 308 aa4.21□□□□□ -1.74
VPS13C-201ENST00000249837 ENKD1Q9H0I2 346 aa4.21□□□□□ -1.74
VPS13C-201ENST00000249837 KCNK15Q9H427 330 aa4.21□□□□□ -1.74
VPS13C-201ENST00000249837 LSM2Q9Y333 95 aaKnown RBP4.21□□□□□ -1.74
VPS13C-201ENST00000249837 LOC100289279A0A1B0GTE1 492 aa4.21□□□□□ -1.74
VPS13C-201ENST00000249837 A0A1B0GUH1 482 aa4.21□□□□□ -1.74
VPS13C-201ENST00000249837 TMEM235A6NFC5 223 aa4.21□□□□□ -1.74
VPS13C-201ENST00000249837 SERPINA5P05154 406 aa4.21□□□□□ -1.74
VPS13C-201ENST00000249837 CRABP1P29762 137 aa4.21□□□□□ -1.74
VPS13C-201ENST00000249837 SLC6A1P30531 599 aa4.21□□□□□ -1.74
VPS13C-201ENST00000249837 MTCP1P56278 107 aa4.21□□□□□ -1.74
VPS13C-201ENST00000249837 SFRP5Q5T4F7 317 aa4.21□□□□□ -1.74
VPS13C-201ENST00000249837 TMEM244Q5VVB8 128 aa4.21□□□□□ -1.74
VPS13C-201ENST00000249837 OR2AK2Q8NG84 335 aa4.21□□□□□ -1.74
VPS13C-201ENST00000249837 ASB17Q8WXJ9 295 aa4.21□□□□□ -1.74
VPS13C-201ENST00000249837 YIPF5Q969M3 257 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms