RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 LDOC1O95751 146 aaPredicted RBP13□□□□□ -0.33
HIF3A-202ENST00000244303 DDAH2O95865 285 aa13□□□□□ -0.33
HIF3A-202ENST00000244303 PLGP00747 810 aaPredicted RBP13□□□□□ -0.33
HIF3A-202ENST00000244303 PTGS2P35354 604 aa13□□□□□ -0.33
HIF3A-202ENST00000244303 SLC6A8P48029 635 aa13□□□□□ -0.33
HIF3A-202ENST00000244303 PXDC1Q5TGL8 231 aa13□□□□□ -0.33
HIF3A-202ENST00000244303 MAMSTRQ6ZN01 415 aa13□□□□□ -0.33
HIF3A-202ENST00000244303 NUP54Q7Z3B4 507 aa13□□□□□ -0.33
HIF3A-202ENST00000244303 MARCH3Q86UD3 253 aa13□□□□□ -0.33
HIF3A-202ENST00000244303 C17orf82Q86X59 251 aaPredicted RBP13□□□□□ -0.33
HIF3A-202ENST00000244303 SDR16C5Q8N3Y7 309 aa13□□□□□ -0.33
HIF3A-202ENST00000244303 OTOSQ8NHW6 89 aa13□□□□□ -0.33
HIF3A-202ENST00000244303 MNTQ99583 582 aa13□□□□□ -0.33
HIF3A-202ENST00000244303 CA10Q9NS85 328 aa13□□□□□ -0.33
HIF3A-202ENST00000244303 MGAT4CQ9UBM8 478 aa13□□□□□ -0.33
HIF3A-202ENST00000244303 ZNF69Q9UC07 566 aa13□□□□□ -0.33
HIF3A-202ENST00000244303 STEAP1Q9UHE8 339 aa13□□□□□ -0.33
HIF3A-202ENST00000244303 MRTO4Q9UKD2 239 aaKnown RBP13□□□□□ -0.33
HIF3A-202ENST00000244303 FBXL3Q9UKT7 428 aa13□□□□□ -0.33
HIF3A-202ENST00000244303 TMEM14AQ9Y6G1 99 aa13□□□□□ -0.33
HIF3A-202ENST00000244303 NUDT14O95848 222 aa13□□□□□ -0.33
HIF3A-202ENST00000244303 ALDOBP05062 364 aa13□□□□□ -0.33
HIF3A-202ENST00000244303 CSRP1P21291 193 aaKnown RBP13□□□□□ -0.33
HIF3A-202ENST00000244303 IL12BP29460 328 aa13□□□□□ -0.33
HIF3A-202ENST00000244303 EFNA3P52797 238 aa13□□□□□ -0.33
HIF3A-202ENST00000244303 ZP2Q05996 745 aa13□□□□□ -0.33
HIF3A-202ENST00000244303 RASGEF1BQ0VAM2 473 aa13□□□□□ -0.33
HIF3A-202ENST00000244303 GRK1Q15835 563 aa13□□□□□ -0.33
HIF3A-202ENST00000244303 WDR38Q5JTN6 314 aa13□□□□□ -0.33
HIF3A-202ENST00000244303 CHRDL2Q6WN34 429 aa13□□□□□ -0.33
HIF3A-202ENST00000244303 SLC35D2Q76EJ3 337 aa13□□□□□ -0.33
HIF3A-202ENST00000244303 CADM4Q8NFZ8 388 aa13□□□□□ -0.33
HIF3A-202ENST00000244303 C15orf40Q8WUR7 153 aa13□□□□□ -0.33
HIF3A-202ENST00000244303 SLC25A36Q96CQ1 311 aa13□□□□□ -0.33
HIF3A-202ENST00000244303 C4orf45Q96LM5 186 aa13□□□□□ -0.33
HIF3A-202ENST00000244303 DCBLD2Q96PD2 775 aa13□□□□□ -0.33
HIF3A-202ENST00000244303 NUDT9Q9BW91 350 aa13□□□□□ -0.33
HIF3A-202ENST00000244303 FOXQ1Q9C009 403 aa13□□□□□ -0.33
HIF3A-202ENST00000244303 DHCR7Q9UBM7 475 aaKnown RBP13□□□□□ -0.33
HIF3A-202ENST00000244303 MMACHCQ9Y4U1 282 aa13□□□□□ -0.33
HIF3A-202ENST00000244303 IGKV3D-11A0A0A0MRZ8 115 aa12.99□□□□□ -0.33
HIF3A-202ENST00000244303 NDUFB6O95139 128 aa12.99□□□□□ -0.33
HIF3A-202ENST00000244303 HLA-DQA2P01906 255 aa12.99□□□□□ -0.33
HIF3A-202ENST00000244303 NR0B1P51843 470 aaKnown RBP12.99□□□□□ -0.33
HIF3A-202ENST00000244303 TSPAN5P62079 268 aa12.99□□□□□ -0.33
HIF3A-202ENST00000244303 TAGLNQ01995 201 aaKnown RBP12.99□□□□□ -0.33
HIF3A-202ENST00000244303 PUDPQ08623 228 aa12.99□□□□□ -0.33
HIF3A-202ENST00000244303 AANATQ16613 207 aa12.99□□□□□ -0.33
HIF3A-202ENST00000244303 PRAMEF17Q5VTA0 474 aa12.99□□□□□ -0.33
HIF3A-202ENST00000244303 HDDC2Q7Z4H3 204 aa12.99□□□□□ -0.33
HIF3A-202ENST00000244303 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.99□□□□□ -0.33
HIF3A-202ENST00000244303 C9orf40Q8IXQ3 194 aa12.99□□□□□ -0.33
HIF3A-202ENST00000244303 MEIOBQ8N635 442 aa12.99□□□□□ -0.33
HIF3A-202ENST00000244303 TSEN15Q8WW01 171 aaKnown RBP12.99□□□□□ -0.33
HIF3A-202ENST00000244303 SEMA4CQ9C0C4 833 aa12.99□□□□□ -0.33
HIF3A-202ENST00000244303 TRAV36DV7A0A075B6V5 113 aa12.99□□□□□ -0.33
HIF3A-202ENST00000244303 XKRYO14609 159 aa12.99□□□□□ -0.33
HIF3A-202ENST00000244303 PHYHO14832 338 aa12.99□□□□□ -0.33
HIF3A-202ENST00000244303 XRCC3O43542 346 aa12.99□□□□□ -0.33
HIF3A-202ENST00000244303 SDC3O75056 442 aa12.99□□□□□ -0.33
HIF3A-202ENST00000244303 CPN1P15169 458 aa12.99□□□□□ -0.33
HIF3A-202ENST00000244303 IFNGR1P15260 489 aa12.99□□□□□ -0.33
HIF3A-202ENST00000244303 CENPAP49450 140 aa12.99□□□□□ -0.33
HIF3A-202ENST00000244303 EFNB2P52799 333 aa12.99□□□□□ -0.33
HIF3A-202ENST00000244303 IKZF1Q13422 519 aa12.99□□□□□ -0.33
HIF3A-202ENST00000244303 EBPQ15125 230 aaKnown RBP12.99□□□□□ -0.33
HIF3A-202ENST00000244303 SMAD2Q15796 467 aaKnown RBP12.99□□□□□ -0.33
HIF3A-202ENST00000244303 MEP1BQ16820 701 aa12.99□□□□□ -0.33
HIF3A-202ENST00000244303 CLLU1Q5K131 121 aa12.99□□□□□ -0.33
HIF3A-202ENST00000244303 OGFOD3Q6PK18 319 aa12.99□□□□□ -0.33
HIF3A-202ENST00000244303 DNM1P46Q6ZS02 220 aa12.99□□□□□ -0.33
HIF3A-202ENST00000244303 SLC51BQ86UW2 128 aa12.99□□□□□ -0.33
HIF3A-202ENST00000244303 GALNT11Q8NCW6 608 aa12.99□□□□□ -0.33
HIF3A-202ENST00000244303 OR51D1Q8NGF3 324 aa12.99□□□□□ -0.33
HIF3A-202ENST00000244303 METTL21AQ8WXB1 218 aa12.99□□□□□ -0.33
HIF3A-202ENST00000244303 MCHR2Q969V1 340 aa12.99□□□□□ -0.33
HIF3A-202ENST00000244303 RADILQ96JH8 1075 aa12.99□□□□□ -0.33
HIF3A-202ENST00000244303 ELOVL3Q9HB03 270 aa12.99□□□□□ -0.33
HIF3A-202ENST00000244303 MRPS17Q9Y2R5 130 aaKnown RBP12.99□□□□□ -0.33
HIF3A-202ENST00000244303 FREM3P0C091 2139 aa12.98□□□□□ -0.33
HIF3A-202ENST00000244303 LMO7DNF2Z398 122 aa12.98□□□□□ -0.33
HIF3A-202ENST00000244303 CDK2AP1O14519 115 aa12.98□□□□□ -0.33
HIF3A-202ENST00000244303 CREBL2O60519 120 aaPredicted RBP12.98□□□□□ -0.33
HIF3A-202ENST00000244303 RAD1O60671 282 aa12.98□□□□□ -0.33
HIF3A-202ENST00000244303 SLC25A12O75746 678 aa12.98□□□□□ -0.33
HIF3A-202ENST00000244303 CFDP00746 253 aaPredicted RBP12.98□□□□□ -0.33
HIF3A-202ENST00000244303 HNRNPKP61978 463 aaKnown RBP eCLIP12.98□□□□□ -0.33
HIF3A-202ENST00000244303 PCGF3Q3KNV8 242 aa12.98□□□□□ -0.33
HIF3A-202ENST00000244303 ZNF626Q68DY1 528 aa12.98□□□□□ -0.33
HIF3A-202ENST00000244303 SPICQ8N5J4 248 aa12.98□□□□□ -0.33
HIF3A-202ENST00000244303 RELTQ969Z4 430 aa12.98□□□□□ -0.33
HIF3A-202ENST00000244303 RBP7Q96R05 134 aa12.98□□□□□ -0.33
HIF3A-202ENST00000244303 UTP23Q9BRU9 249 aaKnown RBP12.98□□□□□ -0.33
HIF3A-202ENST00000244303 PTDSS2Q9BVG9 487 aa12.98□□□□□ -0.33
HIF3A-202ENST00000244303 PCED1AQ9H1Q7 454 aa12.98□□□□□ -0.33
HIF3A-202ENST00000244303 KCNK15Q9H427 330 aa12.98□□□□□ -0.33
HIF3A-202ENST00000244303 PIPOXQ9P0Z9 390 aa12.98□□□□□ -0.33
HIF3A-202ENST00000244303 EPHA6Q9UF33 1036 aa12.98□□□□□ -0.33
HIF3A-202ENST00000244303 PPIEQ9UNP9 301 aaKnown RBP12.98□□□□□ -0.33
HIF3A-202ENST00000244303 B9D1Q9UPM9 204 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms