RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 OR1S1Q8NH92 325 aa18.63■□□□□ 0.57
SNX3-201ENST00000230085 CHIAQ9BZP6 476 aa18.63■□□□□ 0.57
SNX3-201ENST00000230085 C1orf198Q9H425 327 aa18.63■□□□□ 0.57
SNX3-201ENST00000230085 A0A1W2PPK0 400 aa18.63■□□□□ 0.57
SNX3-201ENST00000230085 D6RAR5 112 aa18.63■□□□□ 0.57
SNX3-201ENST00000230085 ABCD4O14678 606 aa18.63■□□□□ 0.57
SNX3-201ENST00000230085 B3GALT2O43825 422 aa18.63■□□□□ 0.57
SNX3-201ENST00000230085 HPP00738 406 aa18.63■□□□□ 0.57
SNX3-201ENST00000230085 GYPBP06028 91 aa18.63■□□□□ 0.57
SNX3-201ENST00000230085 APEHP13798 732 aaKnown RBP18.63■□□□□ 0.57
SNX3-201ENST00000230085 RPS4XP62701 263 aaKnown RBP18.63■□□□□ 0.57
SNX3-201ENST00000230085 SRSF4Q08170 494 aaKnown RBP18.63■□□□□ 0.57
SNX3-201ENST00000230085 MGAT2Q10469 447 aa18.63■□□□□ 0.57
SNX3-201ENST00000230085 Q499Y3 187 aa18.63■□□□□ 0.57
SNX3-201ENST00000230085 TRMT12Q53H54 448 aaKnown RBP18.63■□□□□ 0.57
SNX3-201ENST00000230085 HES5Q5TA89 166 aa18.63■□□□□ 0.57
SNX3-201ENST00000230085 FCRLBQ6BAA4 426 aa18.63■□□□□ 0.57
SNX3-201ENST00000230085 WDR74Q6RFH5 385 aaPredicted RBP18.63■□□□□ 0.57
SNX3-201ENST00000230085 STAC2Q6ZMT1 411 aa18.63■□□□□ 0.57
SNX3-201ENST00000230085 MCATQ8IVS2 390 aaKnown RBP18.63■□□□□ 0.57
SNX3-201ENST00000230085 GLB1L2Q8IW92 636 aa18.63■□□□□ 0.57
SNX3-201ENST00000230085 ZNF595Q8IYB9 648 aa18.63■□□□□ 0.57
SNX3-201ENST00000230085 OR2AK2Q8NG84 335 aa18.63■□□□□ 0.57
SNX3-201ENST00000230085 OR5T2Q8NGG2 359 aa18.63■□□□□ 0.57
SNX3-201ENST00000230085 SLC22A18Q96BI1 424 aa18.63■□□□□ 0.57
SNX3-201ENST00000230085 TGM7Q96PF1 710 aa18.63■□□□□ 0.57
SNX3-201ENST00000230085 SLC6A15Q9H2J7 730 aa18.63■□□□□ 0.57
SNX3-201ENST00000230085 ZC4H2Q9NQZ6 224 aa18.63■□□□□ 0.57
SNX3-201ENST00000230085 SLC17A5Q9NRA2 495 aa18.63■□□□□ 0.57
SNX3-201ENST00000230085 COPS3Q9UNS2 423 aa18.63■□□□□ 0.57
SNX3-201ENST00000230085 A8MUA0 341 aa18.62■□□□□ 0.57
SNX3-201ENST00000230085 GLCEO94923 617 aa18.62■□□□□ 0.57
SNX3-201ENST00000230085 ZFPL1O95159 310 aa18.62■□□□□ 0.57
SNX3-201ENST00000230085 NGFRP08138 427 aa18.62■□□□□ 0.57
SNX3-201ENST00000230085 TACSTD2P09758 323 aa18.62■□□□□ 0.57
SNX3-201ENST00000230085 VSIG10L2P0DP72 767 aa18.62■□□□□ 0.57
SNX3-201ENST00000230085 SPI1P17947 270 aa18.62■□□□□ 0.57
SNX3-201ENST00000230085 ANXA7P20073 488 aaKnown RBP18.62■□□□□ 0.57
SNX3-201ENST00000230085 MPGP29372 298 aa18.62■□□□□ 0.57
SNX3-201ENST00000230085 ID4P47928 161 aa18.62■□□□□ 0.57
SNX3-201ENST00000230085 GPR143P51810 404 aa18.62■□□□□ 0.57
SNX3-201ENST00000230085 STX4Q12846 297 aa18.62■□□□□ 0.57
SNX3-201ENST00000230085 RUNX2Q13950 521 aa18.62■□□□□ 0.57
SNX3-201ENST00000230085 ZNF660Q6AZW8 331 aaPredicted RBP18.62■□□□□ 0.57
SNX3-201ENST00000230085 MTFR2Q6P444 385 aa18.62■□□□□ 0.57
SNX3-201ENST00000230085 ULK3Q6PHR2 472 aa18.62■□□□□ 0.57
SNX3-201ENST00000230085 LRRTM1Q86UE6 522 aa18.62■□□□□ 0.57
SNX3-201ENST00000230085 MNTQ99583 582 aa18.62■□□□□ 0.57
SNX3-201ENST00000230085 SLC19A3Q9BZV2 496 aa18.62■□□□□ 0.57
SNX3-201ENST00000230085 SEMA6CQ9H3T2 930 aa18.62■□□□□ 0.57
SNX3-201ENST00000230085 EXOSC3Q9NQT5 275 aaKnown RBP18.62■□□□□ 0.57
SNX3-201ENST00000230085 DNAJB12Q9NXW2 375 aaKnown RBP18.62■□□□□ 0.57
SNX3-201ENST00000230085 COQ3Q9NZJ6 369 aa18.62■□□□□ 0.57
SNX3-201ENST00000230085 KLF2Q9Y5W3 355 aaPredicted RBP18.62■□□□□ 0.57
SNX3-201ENST00000230085 COL27A1Q8IZC6 1860 aaPredicted RBP18.61■□□□□ 0.57
SNX3-201ENST00000230085 TRBV5-7A0A0A0MS05 114 aa18.61■□□□□ 0.57
SNX3-201ENST00000230085 F5H5P2 479 aa18.61■□□□□ 0.57
SNX3-201ENST00000230085 SELENOFO60613 162 aa18.61■□□□□ 0.57
SNX3-201ENST00000230085 DCTDP32321 178 aa18.61■□□□□ 0.57
SNX3-201ENST00000230085 PRICKLE4Q2TBC4 344 aa18.61■□□□□ 0.57
SNX3-201ENST00000230085 LINC01590Q5TEZ4 76 aa18.61■□□□□ 0.57
SNX3-201ENST00000230085 ARMC6Q6NXE6 501 aa18.61■□□□□ 0.57
SNX3-201ENST00000230085 TMEM71Q6P5X7 295 aa18.61■□□□□ 0.57
SNX3-201ENST00000230085 ZNF550Q7Z398 422 aa18.61■□□□□ 0.57
SNX3-201ENST00000230085 PLXDC1Q8IUK5 500 aa18.61■□□□□ 0.57
SNX3-201ENST00000230085 OR2A5Q96R48 311 aa18.61■□□□□ 0.57
SNX3-201ENST00000230085 RAB33BQ9H082 229 aa18.61■□□□□ 0.57
SNX3-201ENST00000230085 FBXO34Q9NWN3 711 aa18.61■□□□□ 0.57
SNX3-201ENST00000230085 ACTR10Q9NZ32 417 aa18.61■□□□□ 0.57
SNX3-201ENST00000230085 MRPL15Q9P015 296 aaKnown RBP18.61■□□□□ 0.57
SNX3-201ENST00000230085 MOKQ9UQ07 419 aa18.61■□□□□ 0.57
SNX3-201ENST00000230085 PYCARD-AS1I3L0S3 204 aa18.6■□□□□ 0.57
SNX3-201ENST00000230085 H2BFSP57053 126 aa18.6■□□□□ 0.57
SNX3-201ENST00000230085 HES3Q5TGS1 186 aa18.6■□□□□ 0.57
SNX3-201ENST00000230085 SDR9C7Q8NEX9 313 aa18.6■□□□□ 0.57
SNX3-201ENST00000230085 OR4K13Q8NH42 304 aa18.6■□□□□ 0.57
SNX3-201ENST00000230085 FLVCR1-AS1Q8TAF5 88 aa18.6■□□□□ 0.57
SNX3-201ENST00000230085 LIPHQ8WWY8 451 aa18.6■□□□□ 0.57
SNX3-201ENST00000230085 COL26A1Q96A83 441 aa18.6■□□□□ 0.57
SNX3-201ENST00000230085 LMF2Q9BU23 707 aaKnown RBP18.6■□□□□ 0.57
SNX3-201ENST00000230085 EPHA6Q9UF33 1036 aa18.6■□□□□ 0.57
SNX3-201ENST00000230085 IGHV5-10-1A0A0J9YXX1 117 aa18.6■□□□□ 0.57
SNX3-201ENST00000230085 ANXA2P2A6NMY6 339 aa18.6■□□□□ 0.57
SNX3-201ENST00000230085 C2orf74A8MZ97 194 aa18.6■□□□□ 0.57
SNX3-201ENST00000230085 RBBP9O75884 186 aa18.6■□□□□ 0.57
SNX3-201ENST00000230085 GPR75O95800 540 aa18.6■□□□□ 0.57
SNX3-201ENST00000230085 UBBP0CG47 229 aa18.6■□□□□ 0.57
SNX3-201ENST00000230085 UBCP0CG48 685 aaKnown RBP18.6■□□□□ 0.57
SNX3-201ENST00000230085 POU3F2P20265 443 aaPredicted RBP18.6■□□□□ 0.57
SNX3-201ENST00000230085 PTNP21246 168 aa18.6■□□□□ 0.57
SNX3-201ENST00000230085 HCCSP53701 268 aa18.6■□□□□ 0.57
SNX3-201ENST00000230085 NANOS3P60323 173 aaKnown RBP18.6■□□□□ 0.57
SNX3-201ENST00000230085 RPS27AP62979 156 aaKnown RBP18.6■□□□□ 0.57
SNX3-201ENST00000230085 UBA52P62987 128 aaKnown RBP18.6■□□□□ 0.57
SNX3-201ENST00000230085 CTAG1AP78358 180 aa18.6■□□□□ 0.57
SNX3-201ENST00000230085 ZNF141Q15928 474 aa18.6■□□□□ 0.57
SNX3-201ENST00000230085 NDUFAF6Q330K2 333 aa18.6■□□□□ 0.57
SNX3-201ENST00000230085 ALG10BQ5I7T1 473 aa18.6■□□□□ 0.57
SNX3-201ENST00000230085 CDCP2Q5VXM1 449 aa18.6■□□□□ 0.57
SNX3-201ENST00000230085 KRT77Q7Z794 578 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms