RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 A6NIZ1 184 aa19.81■□□□□ 0.76
SMARCD2-201ENST00000225742 DNASE1P24855 282 aa19.81■□□□□ 0.76
SMARCD2-201ENST00000225742 RAP1BP61224 184 aa19.81■□□□□ 0.76
SMARCD2-201ENST00000225742 RAP1AP62834 184 aa19.81■□□□□ 0.76
SMARCD2-201ENST00000225742 INSM1Q01101 510 aaPredicted RBP19.81■□□□□ 0.76
SMARCD2-201ENST00000225742 MFSD13AQ14CX5 517 aa19.81■□□□□ 0.76
SMARCD2-201ENST00000225742 STPG1Q5TH74 334 aa19.81■□□□□ 0.76
SMARCD2-201ENST00000225742 CHRDL2Q6WN34 429 aa19.81■□□□□ 0.76
SMARCD2-201ENST00000225742 GLDNQ6ZMI3 551 aaPredicted RBP19.81■□□□□ 0.76
SMARCD2-201ENST00000225742 ZNF501Q96CX3 271 aaPredicted RBP19.81■□□□□ 0.76
SMARCD2-201ENST00000225742 AMELYQ99218 206 aa19.81■□□□□ 0.76
SMARCD2-201ENST00000225742 GPN1Q9HCN4 374 aaPredicted RBP19.81■□□□□ 0.76
SMARCD2-201ENST00000225742 NPDC1Q9NQX5 325 aaPredicted RBP19.81■□□□□ 0.76
SMARCD2-201ENST00000225742 CDH23Q9H251 3354 aa19.81■□□□□ 0.76
SMARCD2-201ENST00000225742 SLC22A23A1A5C7 686 aa19.81■□□□□ 0.76
SMARCD2-201ENST00000225742 SNRPGP15A8MWD9 76 aa19.81■□□□□ 0.76
SMARCD2-201ENST00000225742 GMFGO60234 142 aa19.81■□□□□ 0.76
SMARCD2-201ENST00000225742 SLC16A7O60669 478 aa19.81■□□□□ 0.76
SMARCD2-201ENST00000225742 NDUFB6O95139 128 aa19.81■□□□□ 0.76
SMARCD2-201ENST00000225742 HPXP02790 462 aa19.81■□□□□ 0.76
SMARCD2-201ENST00000225742 CPN1P15169 458 aa19.81■□□□□ 0.76
SMARCD2-201ENST00000225742 SSBP1Q04837 148 aaKnown RBP19.81■□□□□ 0.76
SMARCD2-201ENST00000225742 ZP4Q12836 540 aa19.81■□□□□ 0.76
SMARCD2-201ENST00000225742 TMEM255AQ5JRV8 349 aa19.81■□□□□ 0.76
SMARCD2-201ENST00000225742 PRAMEF17Q5VTA0 474 aa19.81■□□□□ 0.76
SMARCD2-201ENST00000225742 DNAAF1Q8NEP3 725 aa19.81■□□□□ 0.76
SMARCD2-201ENST00000225742 BEST4Q8NFU0 473 aa19.81■□□□□ 0.76
SMARCD2-201ENST00000225742 OR8H1Q8NGG4 311 aa19.81■□□□□ 0.76
SMARCD2-201ENST00000225742 OR10AC1Q8NH08 325 aa19.81■□□□□ 0.76
SMARCD2-201ENST00000225742 CEP76Q8TAP6 659 aa19.81■□□□□ 0.76
SMARCD2-201ENST00000225742 ST8SIA1Q92185 356 aa19.81■□□□□ 0.76
SMARCD2-201ENST00000225742 C8orf44Q96CB5 159 aa19.81■□□□□ 0.76
SMARCD2-201ENST00000225742 NXPE2Q96DL1 559 aa19.81■□□□□ 0.76
SMARCD2-201ENST00000225742 OR10A4Q9H209 315 aa19.81■□□□□ 0.76
SMARCD2-201ENST00000225742 MRPL22Q9NWU5 206 aaKnown RBP19.81■□□□□ 0.76
SMARCD2-201ENST00000225742 CDV3Q9UKY7 258 aaKnown RBP19.81■□□□□ 0.76
SMARCD2-201ENST00000225742 SRPK3Q9UPE1 567 aa19.81■□□□□ 0.76
SMARCD2-201ENST00000225742 CPAMD8Q8IZJ3 1885 aa19.8■□□□□ 0.76
SMARCD2-201ENST00000225742 H7C417 338 aa19.8■□□□□ 0.76
SMARCD2-201ENST00000225742 ARPC1BO15143 372 aaKnown RBP19.8■□□□□ 0.76
SMARCD2-201ENST00000225742 ICMTO60725 284 aa19.8■□□□□ 0.76
SMARCD2-201ENST00000225742 RBBP9O75884 186 aa19.8■□□□□ 0.76
SMARCD2-201ENST00000225742 IFNGR1P15260 489 aa19.8■□□□□ 0.76
SMARCD2-201ENST00000225742 CSF2RBP32927 897 aa19.8■□□□□ 0.76
SMARCD2-201ENST00000225742 CSNK1EP49674 416 aaKnown RBP19.8■□□□□ 0.76
SMARCD2-201ENST00000225742 VEGFCP49767 419 aa19.8■□□□□ 0.76
SMARCD2-201ENST00000225742 SUMO3P55854 103 aaPredicted RBP19.8■□□□□ 0.76
SMARCD2-201ENST00000225742 ZP1P60852 638 aa19.8■□□□□ 0.76
SMARCD2-201ENST00000225742 UBXN2BQ14CS0 331 aa19.8■□□□□ 0.76
SMARCD2-201ENST00000225742 RAB11BQ15907 218 aa19.8■□□□□ 0.76
SMARCD2-201ENST00000225742 LRRC69Q6ZNQ3 347 aa19.8■□□□□ 0.76
SMARCD2-201ENST00000225742 KRT77Q7Z794 578 aa19.8■□□□□ 0.76
SMARCD2-201ENST00000225742 OR11H4Q8NGC9 324 aa19.8■□□□□ 0.76
SMARCD2-201ENST00000225742 GCDHQ92947 438 aaPredicted RBP19.8■□□□□ 0.76
SMARCD2-201ENST00000225742 IRF2BPLQ9H1B7 796 aa19.8■□□□□ 0.76
SMARCD2-201ENST00000225742 ZNF768Q9H5H4 540 aaKnown RBP19.8■□□□□ 0.76
SMARCD2-201ENST00000225742 MTFP1Q9UDX5 166 aa19.8■□□□□ 0.76
SMARCD2-201ENST00000225742 KNL1Q8NG31 2342 aa19.8■□□□□ 0.76
SMARCD2-201ENST00000225742 SLC17A2O00624 439 aa19.79■□□□□ 0.76
SMARCD2-201ENST00000225742 GPANK1O95872 356 aa19.79■□□□□ 0.76
SMARCD2-201ENST00000225742 SYPP08247 313 aa19.79■□□□□ 0.76
SMARCD2-201ENST00000225742 CSF1P09603 554 aa19.79■□□□□ 0.76
SMARCD2-201ENST00000225742 RIDAP52758 137 aaKnown RBP19.79■□□□□ 0.76
SMARCD2-201ENST00000225742 DLX5P56178 289 aa19.79■□□□□ 0.76
SMARCD2-201ENST00000225742 RPS15P62841 145 aaKnown RBP19.79■□□□□ 0.76
SMARCD2-201ENST00000225742 C1orf189Q5VU69 101 aa19.79■□□□□ 0.76
SMARCD2-201ENST00000225742 DNM1P34Q6PK57 102 aa19.79■□□□□ 0.76
SMARCD2-201ENST00000225742 TEX261Q6UWH6 196 aa19.79■□□□□ 0.76
SMARCD2-201ENST00000225742 ZNF248Q8NDW4 579 aa19.79■□□□□ 0.76
SMARCD2-201ENST00000225742 MS4A3Q96HJ5 214 aa19.79■□□□□ 0.76
SMARCD2-201ENST00000225742 SORCS2Q96PQ0 1159 aa19.79■□□□□ 0.76
SMARCD2-201ENST00000225742 SEMA4CQ9C0C4 833 aa19.79■□□□□ 0.76
SMARCD2-201ENST00000225742 FGF21Q9NSA1 209 aa19.79■□□□□ 0.76
SMARCD2-201ENST00000225742 FLVCR2Q9UPI3 526 aa19.79■□□□□ 0.76
SMARCD2-201ENST00000225742 U3KQ87 197 aa19.79■□□□□ 0.76
SMARCD2-201ENST00000225742 ANKUB1A6NFN9 424 aa19.79■□□□□ 0.76
SMARCD2-201ENST00000225742 NPIPB13A6NJU9 1138 aa19.79■□□□□ 0.76
SMARCD2-201ENST00000225742 NPIPB4C9JG80 1138 aa19.79■□□□□ 0.76
SMARCD2-201ENST00000225742 TOX3O15405 576 aaPredicted RBP19.79■□□□□ 0.76
SMARCD2-201ENST00000225742 NOS1APO75052 506 aaPredicted RBP19.79■□□□□ 0.76
SMARCD2-201ENST00000225742 PLGP00747 810 aaPredicted RBP19.79■□□□□ 0.76
SMARCD2-201ENST00000225742 SPARCP09486 303 aa19.79■□□□□ 0.76
SMARCD2-201ENST00000225742 RPS27P42677 84 aaKnown RBP19.79■□□□□ 0.76
SMARCD2-201ENST00000225742 RNF4P78317 190 aa19.79■□□□□ 0.76
SMARCD2-201ENST00000225742 NLRC3Q7RTR2 1065 aa19.79■□□□□ 0.76
SMARCD2-201ENST00000225742 CATSPERDQ86XM0 798 aa19.79■□□□□ 0.76
SMARCD2-201ENST00000225742 OR51A4Q8NGJ6 313 aa19.79■□□□□ 0.76
SMARCD2-201ENST00000225742 DNASE2BQ8WZ79 361 aa19.79■□□□□ 0.76
SMARCD2-201ENST00000225742 CEP192Q8TEP8 1941 aa19.78■□□□□ 0.76
SMARCD2-201ENST00000225742 LOC100289279A0A1B0GTE1 492 aa19.78■□□□□ 0.76
SMARCD2-201ENST00000225742 GGT3PA6NGU5 568 aa19.78■□□□□ 0.76
SMARCD2-201ENST00000225742 CTAG2O75638 210 aa19.78■□□□□ 0.76
SMARCD2-201ENST00000225742 CD37P11049 281 aa19.78■□□□□ 0.76
SMARCD2-201ENST00000225742 FSTP19883 344 aa19.78■□□□□ 0.76
SMARCD2-201ENST00000225742 IGFBP4P22692 258 aa19.78■□□□□ 0.76
SMARCD2-201ENST00000225742 MAP2K6P52564 334 aa19.78■□□□□ 0.76
SMARCD2-201ENST00000225742 ADAM8P78325 824 aa19.78■□□□□ 0.76
SMARCD2-201ENST00000225742 GLO1Q04760 184 aa19.78■□□□□ 0.76
SMARCD2-201ENST00000225742 RABEPKQ7Z6M1 372 aa19.78■□□□□ 0.76
SMARCD2-201ENST00000225742 PRSS58Q8IYP2 241 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms