RNA–Protein interactions for RNA: ENST00000225441.11

RUNDC3A-201, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-201ENST00000225441 EGR4Q05215 589 aa22.52■■□□□ 1.2
RUNDC3A-201ENST00000225441 RPL18Q07020 188 aaKnown RBP22.52■■□□□ 1.2
RUNDC3A-201ENST00000225441 GXYLT1Q4G148 440 aa22.52■■□□□ 1.2
RUNDC3A-201ENST00000225441 LYPD8Q6UX82 237 aa22.52■■□□□ 1.2
RUNDC3A-201ENST00000225441 GLDNQ6ZMI3 551 aaPredicted RBP22.52■■□□□ 1.2
RUNDC3A-201ENST00000225441 HDDC2Q7Z4H3 204 aa22.52■■□□□ 1.2
RUNDC3A-201ENST00000225441 ASB17Q8WXJ9 295 aa22.52■■□□□ 1.2
RUNDC3A-201ENST00000225441 FGF21Q9NSA1 209 aa22.52■■□□□ 1.2
RUNDC3A-201ENST00000225441 A0A1W2PQD3 144 aa22.51■■□□□ 1.19
RUNDC3A-201ENST00000225441 LEUTXA8MZ59 168 aa22.51■■□□□ 1.19
RUNDC3A-201ENST00000225441 IDSB3KWA1 339 aa22.51■■□□□ 1.19
RUNDC3A-201ENST00000225441 D6RAR5 112 aa22.51■■□□□ 1.19
RUNDC3A-201ENST00000225441 GMDSO60547 372 aa22.51■■□□□ 1.19
RUNDC3A-201ENST00000225441 EIF4E2O60573 245 aaKnown RBP22.51■■□□□ 1.19
RUNDC3A-201ENST00000225441 AP2S1P53680 142 aaPredicted RBP22.51■■□□□ 1.19
RUNDC3A-201ENST00000225441 DHODHQ02127 395 aa22.51■■□□□ 1.19
RUNDC3A-201ENST00000225441 ZNF227Q86WZ6 799 aa22.51■■□□□ 1.19
RUNDC3A-201ENST00000225441 LSRQ86X29 649 aaPredicted RBP22.51■■□□□ 1.19
RUNDC3A-201ENST00000225441 NAXDQ8IW45 347 aa22.51■■□□□ 1.19
RUNDC3A-201ENST00000225441 OR2G2Q8NGZ5 317 aa22.51■■□□□ 1.19
RUNDC3A-201ENST00000225441 PTPMT1Q8WUK0 201 aaPredicted RBP22.51■■□□□ 1.19
RUNDC3A-201ENST00000225441 ATOH1Q92858 354 aaPredicted RBP22.51■■□□□ 1.19
RUNDC3A-201ENST00000225441 ZNF501Q96CX3 271 aaPredicted RBP22.51■■□□□ 1.19
RUNDC3A-201ENST00000225441 MVB12AQ96EY5 273 aa22.51■■□□□ 1.19
RUNDC3A-201ENST00000225441 CITED4Q96RK1 184 aa22.51■■□□□ 1.19
RUNDC3A-201ENST00000225441 INTS14Q96SY0 518 aa22.51■■□□□ 1.19
RUNDC3A-201ENST00000225441 SLC17A5Q9NRA2 495 aa22.51■■□□□ 1.19
RUNDC3A-201ENST00000225441 IQCJ-SCHIP1C9J366 451 aaPredicted RBP22.5■■□□□ 1.19
RUNDC3A-201ENST00000225441 CDC40O60508 579 aaKnown RBP eCLIP22.5■■□□□ 1.19
RUNDC3A-201ENST00000225441 GLSO94925 669 aaPredicted RBP22.5■■□□□ 1.19
RUNDC3A-201ENST00000225441 MT-ATP6P00846 226 aa22.5■■□□□ 1.19
RUNDC3A-201ENST00000225441 LTBQ06643 244 aa22.5■■□□□ 1.19
RUNDC3A-201ENST00000225441 TOMM20Q15388 145 aa22.5■■□□□ 1.19
RUNDC3A-201ENST00000225441 CSRP2Q16527 193 aa22.5■■□□□ 1.19
RUNDC3A-201ENST00000225441 LGALSLQ3ZCW2 172 aaPredicted RBP22.5■■□□□ 1.19
RUNDC3A-201ENST00000225441 APOOLQ6UXV4 268 aa22.5■■□□□ 1.19
RUNDC3A-201ENST00000225441 UXS1Q8NBZ7 420 aa22.5■■□□□ 1.19
RUNDC3A-201ENST00000225441 TSPAN32Q96QS1 320 aa22.5■■□□□ 1.19
RUNDC3A-201ENST00000225441 LANCL2Q9NS86 450 aa22.5■■□□□ 1.19
RUNDC3A-201ENST00000225441 CUTCQ9NTM9 273 aa22.5■■□□□ 1.19
RUNDC3A-201ENST00000225441 MYO15AQ9UKN7 3530 aa22.5■■□□□ 1.19
RUNDC3A-201ENST00000225441 LOC105378220A0A1B0GUY1 285 aaPredicted RBP22.5■■□□□ 1.19
RUNDC3A-201ENST00000225441 A0A1W2PQ72 361 aa22.5■■□□□ 1.19
RUNDC3A-201ENST00000225441 XRCC3O43542 346 aa22.5■■□□□ 1.19
RUNDC3A-201ENST00000225441 TSC22D2O75157 780 aa22.5■■□□□ 1.19
RUNDC3A-201ENST00000225441 GIPP09681 153 aaPredicted RBP22.5■■□□□ 1.19
RUNDC3A-201ENST00000225441 TAS2R20P59543 309 aa22.5■■□□□ 1.19
RUNDC3A-201ENST00000225441 SSBP1Q04837 148 aaKnown RBP22.5■■□□□ 1.19
RUNDC3A-201ENST00000225441 MESTQ5EB52 335 aa22.5■■□□□ 1.19
RUNDC3A-201ENST00000225441 CLLU1Q5K131 121 aa22.5■■□□□ 1.19
RUNDC3A-201ENST00000225441 SFRP4Q6FHJ7 346 aaPredicted RBP22.5■■□□□ 1.19
RUNDC3A-201ENST00000225441 NLRC3Q7RTR2 1065 aa22.5■■□□□ 1.19
RUNDC3A-201ENST00000225441 ZNF563Q8TA94 476 aa22.5■■□□□ 1.19
RUNDC3A-201ENST00000225441 DCBLD2Q96PD2 775 aa22.5■■□□□ 1.19
RUNDC3A-201ENST00000225441 NOX3Q9HBY0 568 aa22.5■■□□□ 1.19
RUNDC3A-201ENST00000225441 STEAP1Q9UHE8 339 aa22.5■■□□□ 1.19
RUNDC3A-201ENST00000225441 KLHDC2Q9Y2U9 406 aa22.5■■□□□ 1.19
RUNDC3A-201ENST00000225441 TRAV36DV7A0A075B6V5 113 aa22.49■■□□□ 1.19
RUNDC3A-201ENST00000225441 ANXA2P2A6NMY6 339 aa22.49■■□□□ 1.19
RUNDC3A-201ENST00000225441 SHOXO15266 292 aa22.49■■□□□ 1.19
RUNDC3A-201ENST00000225441 OIP5O43482 229 aa22.49■■□□□ 1.19
RUNDC3A-201ENST00000225441 LRP3O75074 770 aa22.49■■□□□ 1.19
RUNDC3A-201ENST00000225441 SERPINI2O75830 405 aa22.49■■□□□ 1.19
RUNDC3A-201ENST00000225441 NDUFB6O95139 128 aa22.49■■□□□ 1.19
RUNDC3A-201ENST00000225441 HPXP02790 462 aa22.49■■□□□ 1.19
RUNDC3A-201ENST00000225441 ANXA2P07355 339 aaKnown RBP22.49■■□□□ 1.19
RUNDC3A-201ENST00000225441 CDK2P24941 298 aa22.49■■□□□ 1.19
RUNDC3A-201ENST00000225441 CCR4P51679 360 aa22.49■■□□□ 1.19
RUNDC3A-201ENST00000225441 ARPC4P59998 168 aa22.49■■□□□ 1.19
RUNDC3A-201ENST00000225441 ZP1P60852 638 aa22.49■■□□□ 1.19
RUNDC3A-201ENST00000225441 ACY1Q03154 408 aa22.49■■□□□ 1.19
RUNDC3A-201ENST00000225441 SNTA1Q13424 505 aa22.49■■□□□ 1.19
RUNDC3A-201ENST00000225441 TMEM151BQ8IW70 566 aa22.49■■□□□ 1.19
RUNDC3A-201ENST00000225441 CCDC28AQ8IWP9 274 aa22.49■■□□□ 1.19
RUNDC3A-201ENST00000225441 TSPAN10Q9H1Z9 355 aaPredicted RBP22.49■■□□□ 1.19
RUNDC3A-201ENST00000225441 SRA1Q9HD15 236 aaKnown RBP22.49■■□□□ 1.19
RUNDC3A-201ENST00000225441 PARD6AQ9NPB6 346 aa22.49■■□□□ 1.19
RUNDC3A-201ENST00000225441 ICMTO60725 284 aa22.48■■□□□ 1.19
RUNDC3A-201ENST00000225441 RPP14O95059 124 aaKnown RBP22.48■■□□□ 1.19
RUNDC3A-201ENST00000225441 ADRA2CP18825 462 aa22.48■■□□□ 1.19
RUNDC3A-201ENST00000225441 TACR3P29371 465 aa22.48■■□□□ 1.19
RUNDC3A-201ENST00000225441 RAP2BP61225 183 aa22.48■■□□□ 1.19
RUNDC3A-201ENST00000225441 PHF19Q5T6S3 580 aa22.48■■□□□ 1.19
RUNDC3A-201ENST00000225441 BMPERQ8N8U9 685 aa22.48■■□□□ 1.19
RUNDC3A-201ENST00000225441 MCHR2Q969V1 340 aa22.48■■□□□ 1.19
RUNDC3A-201ENST00000225441 TMPRSS13Q9BYE2 586 aa22.48■■□□□ 1.19
RUNDC3A-201ENST00000225441 NXF5Q9H1B4 397 aaKnown RBP22.48■■□□□ 1.19
RUNDC3A-201ENST00000225441 FAM86C1Q9NVL1 165 aa22.48■■□□□ 1.19
RUNDC3A-201ENST00000225441 IKZF2Q9UKS7 526 aa22.48■■□□□ 1.19
RUNDC3A-201ENST00000225441 HEATR5AQ86XA9 2040 aa22.48■■□□□ 1.19
RUNDC3A-201ENST00000225441 FAM171A2A8MVW0 826 aa22.47■■□□□ 1.19
RUNDC3A-201ENST00000225441 TO15178 435 aa22.47■■□□□ 1.19
RUNDC3A-201ENST00000225441 BGLAPP02818 100 aa22.47■■□□□ 1.19
RUNDC3A-201ENST00000225441 IGKV3-11P04433 115 aa22.47■■□□□ 1.19
RUNDC3A-201ENST00000225441 M6PRP20645 277 aa22.47■■□□□ 1.19
RUNDC3A-201ENST00000225441 CSRP1P21291 193 aaKnown RBP22.47■■□□□ 1.19
RUNDC3A-201ENST00000225441 MST1P26927 711 aa22.47■■□□□ 1.19
RUNDC3A-201ENST00000225441 GRPRP30550 384 aa22.47■■□□□ 1.19
RUNDC3A-201ENST00000225441 CBLN3Q6UW01 205 aa22.47■■□□□ 1.19
RUNDC3A-201ENST00000225441 ZNF676Q8N7Q3 588 aa22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms