RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 CMTM1Q8IZ96 169 aa12.54□□□□□ -0.4
SIX4-201ENST00000216513 ASB17Q8WXJ9 295 aa12.54□□□□□ -0.4
SIX4-201ENST00000216513 ZFP64Q9NPA5 681 aa12.54□□□□□ -0.4
SIX4-201ENST00000216513 TMEM72A0PK05 275 aa12.53□□□□□ -0.4
SIX4-201ENST00000216513 ITGAMP11215 1152 aa12.53□□□□□ -0.4
SIX4-201ENST00000216513 RPL11P62913 178 aaKnown RBP12.53□□□□□ -0.4
SIX4-201ENST00000216513 SPCS2Q15005 226 aa12.53□□□□□ -0.4
SIX4-201ENST00000216513 KCNJ8Q15842 424 aa12.53□□□□□ -0.4
SIX4-201ENST00000216513 DCAF10Q5QP82 559 aa12.53□□□□□ -0.4
SIX4-201ENST00000216513 ELP2Q6IA86 826 aa12.53□□□□□ -0.4
SIX4-201ENST00000216513 CNIH2Q6PI25 160 aa12.53□□□□□ -0.4
SIX4-201ENST00000216513 SYNPRQ8TBG9 265 aa12.53□□□□□ -0.4
SIX4-201ENST00000216513 EMG1Q92979 244 aaKnown RBP12.53□□□□□ -0.4
SIX4-201ENST00000216513 ALG12Q9BV10 488 aa12.53□□□□□ -0.4
SIX4-201ENST00000216513 ASB1Q9Y576 335 aa12.53□□□□□ -0.4
SIX4-201ENST00000216513 TIMM10BQ9Y5J6 103 aa12.53□□□□□ -0.4
SIX4-201ENST00000216513 ATAD5Q96QE3 1844 aa12.53□□□□□ -0.4
SIX4-201ENST00000216513 PRR19A6NJB7 356 aa12.53□□□□□ -0.4
SIX4-201ENST00000216513 CD3EP07766 207 aa12.53□□□□□ -0.4
SIX4-201ENST00000216513 TBXA2RP21731 343 aa12.53□□□□□ -0.4
SIX4-201ENST00000216513 ART1P52961 327 aa12.53□□□□□ -0.4
SIX4-201ENST00000216513 MRGPRX4Q96LA9 322 aa12.53□□□□□ -0.4
SIX4-201ENST00000216513 ZNF768Q9H5H4 540 aaKnown RBP12.53□□□□□ -0.4
SIX4-201ENST00000216513 MEPEQ9NQ76 525 aaPredicted RBP12.53□□□□□ -0.4
SIX4-201ENST00000216513 ANKUB1A6NFN9 424 aa12.53□□□□□ -0.4
SIX4-201ENST00000216513 LYZL6O75951 148 aa12.53□□□□□ -0.4
SIX4-201ENST00000216513 CNIH1O95406 144 aa12.53□□□□□ -0.4
SIX4-201ENST00000216513 MT-ATP6P00846 226 aa12.53□□□□□ -0.4
SIX4-201ENST00000216513 GABRA1P14867 456 aa12.53□□□□□ -0.4
SIX4-201ENST00000216513 ABCD3P28288 659 aa12.53□□□□□ -0.4
SIX4-201ENST00000216513 PRKAR1BP31321 381 aa12.53□□□□□ -0.4
SIX4-201ENST00000216513 SNTB2Q13425 540 aaKnown RBP12.53□□□□□ -0.4
SIX4-201ENST00000216513 HRASLS5Q96KN8 279 aa12.53□□□□□ -0.4
SIX4-201ENST00000216513 ZNF583Q96ND8 569 aa12.53□□□□□ -0.4
SIX4-201ENST00000216513 NKX3-1Q99801 234 aaPredicted RBP12.53□□□□□ -0.4
SIX4-201ENST00000216513 RTL8AQ9BWD3 113 aa12.53□□□□□ -0.4
SIX4-201ENST00000216513 SPNS1Q9H2V7 528 aa12.53□□□□□ -0.4
SIX4-201ENST00000216513 TUBA8Q9NY65 449 aaPredicted RBP12.53□□□□□ -0.4
SIX4-201ENST00000216513 GLCEO94923 617 aa12.53□□□□□ -0.4
SIX4-201ENST00000216513 GUSBP08236 651 aa12.53□□□□□ -0.4
SIX4-201ENST00000216513 SOX18P35713 384 aa12.53□□□□□ -0.4
SIX4-201ENST00000216513 PMPCAQ10713 525 aa12.53□□□□□ -0.4
SIX4-201ENST00000216513 FCRL6Q6DN72 434 aa12.53□□□□□ -0.4
SIX4-201ENST00000216513 LCN8Q6JVE9 175 aa12.53□□□□□ -0.4
SIX4-201ENST00000216513 CYP4V2Q6ZWL3 525 aaPredicted RBP12.53□□□□□ -0.4
SIX4-201ENST00000216513 MRGPREQ86SM8 312 aa12.53□□□□□ -0.4
SIX4-201ENST00000216513 PIGTQ969N2 578 aa12.53□□□□□ -0.4
SIX4-201ENST00000216513 ALKBH3Q96Q83 286 aaPredicted RBP12.53□□□□□ -0.4
SIX4-201ENST00000216513 ONECUT1Q9UBC0 465 aa12.53□□□□□ -0.4
SIX4-201ENST00000216513 CXorf51AA0A1B0GTR3 108 aa12.53□□□□□ -0.4
SIX4-201ENST00000216513 MEGF11A6BM72 1044 aa12.53□□□□□ -0.4
SIX4-201ENST00000216513 ANKRD61A6NGH8 418 aa12.53□□□□□ -0.4
SIX4-201ENST00000216513 MAGEA5P43359 124 aa12.53□□□□□ -0.4
SIX4-201ENST00000216513 EIF5AL1Q6IS14 154 aaKnown RBP12.53□□□□□ -0.4
SIX4-201ENST00000216513 RNF113BQ8IZP6 322 aaKnown RBP12.53□□□□□ -0.4
SIX4-201ENST00000216513 DCAF13Q9NV06 445 aaKnown RBP12.53□□□□□ -0.4
SIX4-201ENST00000216513 TRBV5-4A0A0C4DH59 114 aa12.52□□□□□ -0.4
SIX4-201ENST00000216513 MCRIP1C9JLW8 97 aa12.52□□□□□ -0.4
SIX4-201ENST00000216513 CEACAM1P13688 526 aa12.52□□□□□ -0.4
SIX4-201ENST00000216513 LIFP15018 202 aa12.52□□□□□ -0.4
SIX4-201ENST00000216513 SYT14P1Q58G82 188 aa12.52□□□□□ -0.4
SIX4-201ENST00000216513 DCXRQ7Z4W1 244 aa12.52□□□□□ -0.4
SIX4-201ENST00000216513 RETREG3Q86VR2 466 aa12.52□□□□□ -0.4
SIX4-201ENST00000216513 TTC9Q92623 222 aa12.52□□□□□ -0.4
SIX4-201ENST00000216513 MYOTQ9UBF9 498 aa12.52□□□□□ -0.4
SIX4-201ENST00000216513 PIGLQ9Y2B2 252 aa12.52□□□□□ -0.4
SIX4-201ENST00000216513 ACOD1A6NK06 481 aa12.52□□□□□ -0.4
SIX4-201ENST00000216513 P2RY10O00398 339 aa12.52□□□□□ -0.4
SIX4-201ENST00000216513 MAGEB4O15481 346 aaPredicted RBP12.52□□□□□ -0.4
SIX4-201ENST00000216513 PRKACBP22694 351 aa12.52□□□□□ -0.4
SIX4-201ENST00000216513 HTR2BP41595 481 aa12.52□□□□□ -0.4
SIX4-201ENST00000216513 MEPCEQ7L2J0 689 aaKnown RBP12.52□□□□□ -0.4
SIX4-201ENST00000216513 SFTPA2Q8IWL1 248 aa12.52□□□□□ -0.4
SIX4-201ENST00000216513 FAM83FQ8NEG4 500 aaPredicted RBP12.52□□□□□ -0.4
SIX4-201ENST00000216513 CHMP24386 653 aa12.52□□□□□ -0.41
SIX4-201ENST00000216513 GNMTQ14749 295 aa12.52□□□□□ -0.41
SIX4-201ENST00000216513 ARHGAP11BQ3KRB8 267 aa12.52□□□□□ -0.41
SIX4-201ENST00000216513 DESI1Q6ICB0 168 aa12.52□□□□□ -0.41
SIX4-201ENST00000216513 MBOAT2Q6ZWT7 520 aa12.52□□□□□ -0.41
SIX4-201ENST00000216513 ADGRG5Q8IZF4 528 aa12.52□□□□□ -0.41
SIX4-201ENST00000216513 PRSS44E7EML9 344 aa12.52□□□□□ -0.41
SIX4-201ENST00000216513 MASP2O00187 686 aa12.52□□□□□ -0.41
SIX4-201ENST00000216513 C7P10643 843 aa12.52□□□□□ -0.41
SIX4-201ENST00000216513 HSD17B1P14061 328 aa12.52□□□□□ -0.41
SIX4-201ENST00000216513 MSR1P21757 451 aa12.52□□□□□ -0.41
SIX4-201ENST00000216513 FCARP24071 287 aa12.52□□□□□ -0.41
SIX4-201ENST00000216513 INSM1Q01101 510 aaPredicted RBP12.52□□□□□ -0.41
SIX4-201ENST00000216513 TUBA3CQ13748 450 aa12.52□□□□□ -0.41
SIX4-201ENST00000216513 MARVELD2Q8N4S9 558 aa12.52□□□□□ -0.41
SIX4-201ENST00000216513 ANKRD53Q8N9V6 530 aa12.52□□□□□ -0.41
SIX4-201ENST00000216513 C7orf50Q9BRJ6 194 aaKnown RBP12.52□□□□□ -0.41
SIX4-201ENST00000216513 MED29Q9NX70 200 aa12.52□□□□□ -0.41
SIX4-201ENST00000216513 BET1O15155 118 aa12.52□□□□□ -0.41
SIX4-201ENST00000216513 CA5AP35218 305 aa12.52□□□□□ -0.41
SIX4-201ENST00000216513 CDC20Q12834 499 aa12.52□□□□□ -0.41
SIX4-201ENST00000216513 COX15Q7KZN9 410 aa12.52□□□□□ -0.41
SIX4-201ENST00000216513 MS4A15Q8N5U1 240 aa12.52□□□□□ -0.41
SIX4-201ENST00000216513 GLYATL2Q8WU03 294 aa12.52□□□□□ -0.41
SIX4-201ENST00000216513 ST8SIA1Q92185 356 aa12.52□□□□□ -0.41
SIX4-201ENST00000216513 RNF167Q9H6Y7 350 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms