RNA–Protein interactions for RNA: ENST00000216211.8

UPK3A-201, Transcript of uroplakin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UPK3A, Length 1,051 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-201ENST00000216211 LYNX1P0DP58 116 aa12.93□□□□□ -0.34
UPK3A-201ENST00000216211 ATP6V1B2P21281 511 aa12.93□□□□□ -0.34
UPK3A-201ENST00000216211 GIFP27352 417 aa12.93□□□□□ -0.34
UPK3A-201ENST00000216211 IL2RGP31785 369 aa12.93□□□□□ -0.34
UPK3A-201ENST00000216211 GZMMP51124 257 aa12.93□□□□□ -0.34
UPK3A-201ENST00000216211 BIDP55957 195 aa12.93□□□□□ -0.34
UPK3A-201ENST00000216211 CYP51A1Q16850 503 aa12.93□□□□□ -0.34
UPK3A-201ENST00000216211 KRTAP24-1Q3LI83 254 aa12.93□□□□□ -0.34
UPK3A-201ENST00000216211 ENTPD8Q5MY95 495 aa12.93□□□□□ -0.34
UPK3A-201ENST00000216211 ZNF613Q6PF04 617 aa12.93□□□□□ -0.34
UPK3A-201ENST00000216211 WDR88Q6ZMY6 472 aa12.93□□□□□ -0.34
UPK3A-201ENST00000216211 ZNF627Q7L945 461 aa12.93□□□□□ -0.34
UPK3A-201ENST00000216211 PXKQ7Z7A4 578 aa12.93□□□□□ -0.34
UPK3A-201ENST00000216211 CALHM3Q86XJ0 350 aa12.93□□□□□ -0.34
UPK3A-201ENST00000216211 RBM45Q8IUH3 476 aaKnown RBP12.93□□□□□ -0.34
UPK3A-201ENST00000216211 ZNF786Q8N393 782 aa12.93□□□□□ -0.34
UPK3A-201ENST00000216211 C11orf65Q8NCR3 313 aa12.93□□□□□ -0.34
UPK3A-201ENST00000216211 OR4D11Q8NGI4 311 aa12.93□□□□□ -0.34
UPK3A-201ENST00000216211 OR6T1Q8NGN1 323 aa12.93□□□□□ -0.34
UPK3A-201ENST00000216211 OR5J2Q8NH18 312 aa12.93□□□□□ -0.34
UPK3A-201ENST00000216211 VANGL1Q8TAA9 524 aaPredicted RBP12.93□□□□□ -0.34
UPK3A-201ENST00000216211 MRPL24Q96A35 216 aaKnown RBP12.93□□□□□ -0.34
UPK3A-201ENST00000216211 MRPL37Q9BZE1 423 aaKnown RBP12.93□□□□□ -0.34
UPK3A-201ENST00000216211 KAT8Q9H7Z6 458 aaKnown RBP12.93□□□□□ -0.34
UPK3A-201ENST00000216211 FAM220BPB1ANY3 271 aa12.92□□□□□ -0.34
UPK3A-201ENST00000216211 CASQ2O14958 399 aaPredicted RBP12.92□□□□□ -0.34
UPK3A-201ENST00000216211 CHP2O43745 196 aa12.92□□□□□ -0.34
UPK3A-201ENST00000216211 FMO6PO60774 539 aa12.92□□□□□ -0.34
UPK3A-201ENST00000216211 LILRA1O75019 489 aa12.92□□□□□ -0.34
UPK3A-201ENST00000216211 OR6A2O95222 327 aa12.92□□□□□ -0.34
UPK3A-201ENST00000216211 MT-ATP6P00846 226 aa12.92□□□□□ -0.34
UPK3A-201ENST00000216211 THY1P04216 161 aa12.92□□□□□ -0.34
UPK3A-201ENST00000216211 TACSTD2P09758 323 aa12.92□□□□□ -0.34
UPK3A-201ENST00000216211 UMPSP11172 480 aa12.92□□□□□ -0.34
UPK3A-201ENST00000216211 ZNF35P13682 527 aa12.92□□□□□ -0.34
UPK3A-201ENST00000216211 IFNGR1P15260 489 aa12.92□□□□□ -0.34
UPK3A-201ENST00000216211 HNF1AP20823 631 aa12.92□□□□□ -0.34
UPK3A-201ENST00000216211 GIPRP48546 466 aa12.92□□□□□ -0.34
UPK3A-201ENST00000216211 CSNK1A1P48729 337 aa12.92□□□□□ -0.34
UPK3A-201ENST00000216211 RAB1AP62820 205 aa12.92□□□□□ -0.34
UPK3A-201ENST00000216211 RBBP4Q09028 425 aa12.92□□□□□ -0.34
UPK3A-201ENST00000216211 CYP2R1Q6VVX0 501 aa12.92□□□□□ -0.34
UPK3A-201ENST00000216211 PQLC1Q8N2U9 271 aa12.92□□□□□ -0.34
UPK3A-201ENST00000216211 UBASH3BQ8TF42 649 aa12.92□□□□□ -0.34
UPK3A-201ENST00000216211 SNX18Q96RF0 628 aa12.92□□□□□ -0.34
UPK3A-201ENST00000216211 EGFL7Q9UHF1 273 aa12.92□□□□□ -0.34
UPK3A-201ENST00000216211 MAGEL2Q9UJ55 1249 aa12.92□□□□□ -0.34
UPK3A-201ENST00000216211 LRRC42Q9Y546 428 aa12.92□□□□□ -0.34
UPK3A-201ENST00000216211 AP4S1Q9Y587 144 aa12.92□□□□□ -0.34
UPK3A-201ENST00000216211 TCRBV5S2A0A599 114 aa12.91□□□□□ -0.34
UPK3A-201ENST00000216211 LYPD3O95274 346 aa12.91□□□□□ -0.34
UPK3A-201ENST00000216211 RAB36O95755 333 aa12.91□□□□□ -0.34
UPK3A-201ENST00000216211 CH25HO95992 272 aa12.91□□□□□ -0.34
UPK3A-201ENST00000216211 PATE4P0C8F1 98 aa12.91□□□□□ -0.34
UPK3A-201ENST00000216211 APEX1P27695 318 aaKnown RBP12.91□□□□□ -0.34
UPK3A-201ENST00000216211 THBS2P35442 1172 aa12.91□□□□□ -0.34
UPK3A-201ENST00000216211 CHN2P52757 468 aa12.91□□□□□ -0.34
UPK3A-201ENST00000216211 RIN1Q13671 783 aa12.91□□□□□ -0.34
UPK3A-201ENST00000216211 MELKQ14680 651 aa12.91□□□□□ -0.34
UPK3A-201ENST00000216211 RAB39AQ14964 217 aa12.91□□□□□ -0.34
UPK3A-201ENST00000216211 TRIP10Q15642 601 aa12.91□□□□□ -0.34
UPK3A-201ENST00000216211 ZNF74Q16587 644 aa12.91□□□□□ -0.34
UPK3A-201ENST00000216211 CR1LQ2VPA4 569 aa12.91□□□□□ -0.34
UPK3A-201ENST00000216211 MTX3Q5HYI7 312 aa12.91□□□□□ -0.34
UPK3A-201ENST00000216211 GLYATQ6IB77 296 aa12.91□□□□□ -0.34
UPK3A-201ENST00000216211 TTC33Q6PID6 262 aaPredicted RBP12.91□□□□□ -0.34
UPK3A-201ENST00000216211 SLC35D2Q76EJ3 337 aa12.91□□□□□ -0.34
UPK3A-201ENST00000216211 TSPYL5Q86VY4 417 aaPredicted RBP12.91□□□□□ -0.34
UPK3A-201ENST00000216211 LRP11Q86VZ4 500 aa12.91□□□□□ -0.34
UPK3A-201ENST00000216211 OR2T12Q8NG77 320 aa12.91□□□□□ -0.34
UPK3A-201ENST00000216211 OR10A6Q8NH74 314 aa12.91□□□□□ -0.34
UPK3A-201ENST00000216211 FGFBP3Q8TAT2 258 aa12.91□□□□□ -0.34
UPK3A-201ENST00000216211 ADAMTS16Q8TE57 1224 aa12.91□□□□□ -0.34
UPK3A-201ENST00000216211 TMEM54Q969K7 222 aa12.91□□□□□ -0.34
UPK3A-201ENST00000216211 SLCO4A1Q96BD0 722 aa12.91□□□□□ -0.34
UPK3A-201ENST00000216211 SYT3Q9BQG1 590 aa12.91□□□□□ -0.34
UPK3A-201ENST00000216211 GORASP2Q9H8Y8 452 aa12.91□□□□□ -0.34
UPK3A-201ENST00000216211 ARMC1Q9NVT9 282 aa12.91□□□□□ -0.34
UPK3A-201ENST00000216211 TAS2R5Q9NYW4 299 aa12.91□□□□□ -0.34
UPK3A-201ENST00000216211 SLC7A7Q9UM01 511 aa12.91□□□□□ -0.34
UPK3A-201ENST00000216211 FZR1Q9UM11 496 aa12.91□□□□□ -0.34
UPK3A-201ENST00000216211 SPEF1Q9Y4P9 236 aa12.91□□□□□ -0.34
UPK3A-201ENST00000216211 ELOVL7A1L3X0 281 aa12.9□□□□□ -0.34
UPK3A-201ENST00000216211 KPNA4O00629 521 aaPredicted RBP12.9□□□□□ -0.34
UPK3A-201ENST00000216211 RNF13O43567 381 aa12.9□□□□□ -0.34
UPK3A-201ENST00000216211 SYNGR3O43761 229 aa12.9□□□□□ -0.34
UPK3A-201ENST00000216211 UBL3O95164 117 aa12.9□□□□□ -0.34
UPK3A-201ENST00000216211 CD247P20963 164 aa12.9□□□□□ -0.34
UPK3A-201ENST00000216211 GLRXP35754 106 aa12.9□□□□□ -0.34
UPK3A-201ENST00000216211 ALDH3B1P43353 468 aa12.9□□□□□ -0.34
UPK3A-201ENST00000216211 EVX1P49640 407 aa12.9□□□□□ -0.34
UPK3A-201ENST00000216211 GALK2Q01415 458 aa12.9□□□□□ -0.34
UPK3A-201ENST00000216211 ZP4Q12836 540 aa12.9□□□□□ -0.34
UPK3A-201ENST00000216211 PIWIL3Q7Z3Z3 882 aaKnown RBP12.9□□□□□ -0.34
UPK3A-201ENST00000216211 SKA3Q8IX90 412 aa12.9□□□□□ -0.34
UPK3A-201ENST00000216211 MICU2Q8IYU8 434 aa12.9□□□□□ -0.34
UPK3A-201ENST00000216211 LRRC17Q8N6Y2 441 aa12.9□□□□□ -0.34
UPK3A-201ENST00000216211 OR6X1Q8NH79 312 aa12.9□□□□□ -0.34
UPK3A-201ENST00000216211 POP5Q969H6 163 aaKnown RBP12.9□□□□□ -0.34
UPK3A-201ENST00000216211 VCX3BQ9H321 246 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms