RNA–Protein interactions for RNA: ENSMUST00000005841.15

Ctcf-201, Transcript of Transcriptional repressor CTCF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctcf, Length 3,782 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctcf-201ENSMUST00000005841 EdaO54693 391 aa15.42■□□□□ 0.06
Ctcf-201ENSMUST00000005841 Il2rgP34902 369 aa15.42■□□□□ 0.06
Ctcf-201ENSMUST00000005841 Khdc4Q3TCX3 612 aa15.42■□□□□ 0.06
Ctcf-201ENSMUST00000005841 Ccdc71Q8VEG0 433 aa15.42■□□□□ 0.06
Ctcf-201ENSMUST00000005841 Olfr131Q8VGC8 314 aa15.42■□□□□ 0.06
Ctcf-201ENSMUST00000005841 Sntb1Q99L88 537 aaKnown RBP15.42■□□□□ 0.06
Ctcf-201ENSMUST00000005841 Trappc5Q9CQA1 188 aa15.42■□□□□ 0.06
Ctcf-201ENSMUST00000005841 Asf1aQ9CQE6 204 aa15.42■□□□□ 0.06
Ctcf-201ENSMUST00000005841 EurlQ9D7G4 290 aa15.42■□□□□ 0.06
Ctcf-201ENSMUST00000005841 Upf1Q9EPU0 1124 aaKnown RBP15.42■□□□□ 0.06
Ctcf-201ENSMUST00000005841 Tsc22d4Q9EQN3 387 aa15.42■□□□□ 0.06
Ctcf-201ENSMUST00000005841 Esp36G3UZD8 160 aa15.41■□□□□ 0.06
Ctcf-201ENSMUST00000005841 Kyat3Q71RI9 455 aa15.41■□□□□ 0.06
Ctcf-201ENSMUST00000005841 Q8BG31 207 aa15.41■□□□□ 0.06
Ctcf-201ENSMUST00000005841 Olfr434Q8VF17 321 aa15.41■□□□□ 0.06
Ctcf-201ENSMUST00000005841 Phyhd1Q9DB26 291 aa15.41■□□□□ 0.06
Ctcf-201ENSMUST00000005841 Olfr1255A2AUA4 310 aa15.41■□□□□ 0.06
Ctcf-201ENSMUST00000005841 Esp15A8R0U8 85 aa15.41■□□□□ 0.06
Ctcf-201ENSMUST00000005841 Wisp3D3Z5L9 354 aa15.41■□□□□ 0.06
Ctcf-201ENSMUST00000005841 Olfr550E9Q544 316 aa15.41■□□□□ 0.06
Ctcf-201ENSMUST00000005841 Vmn1r159K7N701 305 aa15.41■□□□□ 0.06
Ctcf-201ENSMUST00000005841 Efna4O08542 206 aa15.41■□□□□ 0.06
Ctcf-201ENSMUST00000005841 Hsd3b6O35469 373 aa15.41■□□□□ 0.06
Ctcf-201ENSMUST00000005841 P04945 108 aa15.41■□□□□ 0.06
Ctcf-201ENSMUST00000005841 Cd28P31041 218 aa15.41■□□□□ 0.06
Ctcf-201ENSMUST00000005841 Meox2P32443 303 aa15.41■□□□□ 0.06
Ctcf-201ENSMUST00000005841 Slc35f3Q1LZI2 421 aa15.41■□□□□ 0.06
Ctcf-201ENSMUST00000005841 LipnQ3U4B4 400 aa15.41■□□□□ 0.06
Ctcf-201ENSMUST00000005841 Hsh2dQ6VYH9 334 aa15.41■□□□□ 0.06
Ctcf-201ENSMUST00000005841 P4htmQ8BG58 503 aa15.41■□□□□ 0.06
Ctcf-201ENSMUST00000005841 Gpr137bQ8BNQ3 385 aa15.41■□□□□ 0.06
Ctcf-201ENSMUST00000005841 Tex44Q9DA60 530 aa15.41■□□□□ 0.06
Ctcf-201ENSMUST00000005841 PrnA0A075B668 197 aa15.41■□□□□ 0.06
Ctcf-201ENSMUST00000005841 D3Ertd254eA0A0G2JEM5 796 aa15.41■□□□□ 0.06
Ctcf-201ENSMUST00000005841 Slc23a4A0A0J9YUX7 615 aa15.41■□□□□ 0.06
Ctcf-201ENSMUST00000005841 Tmem156A0A1D5RLR8 321 aa15.41■□□□□ 0.06
Ctcf-201ENSMUST00000005841 Gm12355A2A4X6 163 aa15.41■□□□□ 0.06
Ctcf-201ENSMUST00000005841 Tcp10cE9Q046 482 aa15.41■□□□□ 0.06
Ctcf-201ENSMUST00000005841 Olfr610E9Q598 315 aa15.41■□□□□ 0.06
Ctcf-201ENSMUST00000005841 Gm21876F6XK35 94 aa15.41■□□□□ 0.06
Ctcf-201ENSMUST00000005841 FpgtG5E8F4 590 aa15.41■□□□□ 0.06
Ctcf-201ENSMUST00000005841 Ogg1O08760 345 aa15.41■□□□□ 0.06
Ctcf-201ENSMUST00000005841 Dnajb3O35723 242 aa15.41■□□□□ 0.06
Ctcf-201ENSMUST00000005841 Srsf3P84104 164 aaKnown RBP15.41■□□□□ 0.06
Ctcf-201ENSMUST00000005841 Ubxn2bQ0KL01 331 aa15.41■□□□□ 0.06
Ctcf-201ENSMUST00000005841 Gpr165Q3V3A3 455 aa15.41■□□□□ 0.06
Ctcf-201ENSMUST00000005841 Zfp791Q497V9 528 aa15.41■□□□□ 0.06
Ctcf-201ENSMUST00000005841 Klri2Q5DT36 248 aa15.41■□□□□ 0.06
Ctcf-201ENSMUST00000005841 Smad2Q62432 467 aa15.41■□□□□ 0.06
Ctcf-201ENSMUST00000005841 Tas2r116Q7M713 305 aa15.41■□□□□ 0.06
Ctcf-201ENSMUST00000005841 ArsjQ8BM89 598 aa15.41■□□□□ 0.06
Ctcf-201ENSMUST00000005841 Cldn17Q8BXA6 224 aa15.41■□□□□ 0.06
Ctcf-201ENSMUST00000005841 Dmrta1Q8CFG4 490 aa15.41■□□□□ 0.06
Ctcf-201ENSMUST00000005841 Olfr1280Q8VGG8 305 aa15.41■□□□□ 0.06
Ctcf-201ENSMUST00000005841 Gpn3Q9D3W4 284 aa15.41■□□□□ 0.06
Ctcf-201ENSMUST00000005841 PrndQ9QUG3 179 aa15.41■□□□□ 0.06
Ctcf-201ENSMUST00000005841 Slco1a1Q9QXZ6 670 aa15.41■□□□□ 0.06
Ctcf-201ENSMUST00000005841 Igkv10-95A0A0G2JFY3 115 aa15.4■□□□□ 0.06
Ctcf-201ENSMUST00000005841 Nxpe3B9EKK6 559 aa15.4■□□□□ 0.06
Ctcf-201ENSMUST00000005841 Capn1O35350 713 aa15.4■□□□□ 0.06
Ctcf-201ENSMUST00000005841 PianpQ6P1B3 278 aa15.4■□□□□ 0.06
Ctcf-201ENSMUST00000005841 Znf689Q8BKK5 500 aa15.4■□□□□ 0.06
Ctcf-201ENSMUST00000005841 PisdQ8BSF4 406 aa15.4■□□□□ 0.06
Ctcf-201ENSMUST00000005841 Hat1Q8BY71 416 aa15.4■□□□□ 0.06
Ctcf-201ENSMUST00000005841 Zc3h10Q8R205 435 aaKnown RBP15.4■□□□□ 0.06
Ctcf-201ENSMUST00000005841 Vmn1r42Q8VBS7 329 aa15.4■□□□□ 0.06
Ctcf-201ENSMUST00000005841 Efcab7Q8VDY4 628 aa15.4■□□□□ 0.06
Ctcf-201ENSMUST00000005841 Olfr998Q8VF76 314 aa15.4■□□□□ 0.06
Ctcf-201ENSMUST00000005841 DapQ91XC8 102 aa15.4■□□□□ 0.06
Ctcf-201ENSMUST00000005841 RlimQ9WTV7 600 aa15.4■□□□□ 0.06
Ctcf-201ENSMUST00000005841 Tns1E9Q0S6 1888 aaKnown RBP15.4■□□□□ 0.06
Ctcf-201ENSMUST00000005841 Olfr685A0A1L1SVG7 331 aa15.4■□□□□ 0.06
Ctcf-201ENSMUST00000005841 Fpr-s1O08790 351 aa15.4■□□□□ 0.06
Ctcf-201ENSMUST00000005841 Nipsnap2O55126 281 aa15.4■□□□□ 0.06
Ctcf-201ENSMUST00000005841 Rps4xP62702 263 aaKnown RBP15.4■□□□□ 0.06
Ctcf-201ENSMUST00000005841 Col6a2Q02788 1034 aa15.4■□□□□ 0.06
Ctcf-201ENSMUST00000005841 Olfr1216Q7TR05 311 aa15.4■□□□□ 0.06
Ctcf-201ENSMUST00000005841 Olfr699Q7TRN3 316 aa15.4■□□□□ 0.06
Ctcf-201ENSMUST00000005841 Lats1Q8BYR2 1129 aa15.4■□□□□ 0.06
Ctcf-201ENSMUST00000005841 Dock11A2AF47 2073 aa15.4■□□□□ 0.06
Ctcf-201ENSMUST00000005841 Csnk2a2O54833 350 aaKnown RBP15.4■□□□□ 0.06
Ctcf-201ENSMUST00000005841 CfdP03953 259 aa15.4■□□□□ 0.06
Ctcf-201ENSMUST00000005841 Hmga2P52927 108 aa15.4■□□□□ 0.06
Ctcf-201ENSMUST00000005841 Pax6P63015 422 aa15.4■□□□□ 0.06
Ctcf-201ENSMUST00000005841 Teddm2Q208S0 260 aa15.4■□□□□ 0.06
Ctcf-201ENSMUST00000005841 Grxcr1Q50H32 290 aa15.4■□□□□ 0.06
Ctcf-201ENSMUST00000005841 RflnbQ5SVD0 216 aa15.4■□□□□ 0.06
Ctcf-201ENSMUST00000005841 Sema4cQ64151 834 aa15.4■□□□□ 0.06
Ctcf-201ENSMUST00000005841 Slc6a17Q8BJI1 727 aa15.4■□□□□ 0.06
Ctcf-201ENSMUST00000005841 Olfr214Q8VG27 320 aa15.4■□□□□ 0.06
Ctcf-201ENSMUST00000005841 Lpcat3Q91V01 487 aa15.4■□□□□ 0.06
Ctcf-201ENSMUST00000005841 Pbx4Q99NE9 378 aa15.4■□□□□ 0.06
Ctcf-201ENSMUST00000005841 Actl6aQ9Z2N8 429 aaKnown RBP15.4■□□□□ 0.06
Ctcf-201ENSMUST00000005841 Gm21970F6XX07 295 aa15.39■□□□□ 0.05
Ctcf-201ENSMUST00000005841 Id2P41136 134 aa15.39■□□□□ 0.05
Ctcf-201ENSMUST00000005841 P4ha3Q6W3F0 542 aa15.39■□□□□ 0.05
Ctcf-201ENSMUST00000005841 Arfrp1Q8BXL7 201 aa15.39■□□□□ 0.05
Ctcf-201ENSMUST00000005841 Pqlc2Q8C4N4 293 aa15.39■□□□□ 0.05
Ctcf-201ENSMUST00000005841 CenpxQ8C4X1 78 aa15.39■□□□□ 0.05
Ctcf-201ENSMUST00000005841 Stbd1Q8C7E7 338 aa15.39■□□□□ 0.05
Retrieved 100 of 22,080 RNA–protein pairs in 32.3 ms