RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 SURF4O15260 269 aa11.48□□□□□ -0.57
PHGDH-218ENST00000641491 SLC16A6O15403 523 aa11.48□□□□□ -0.57
PHGDH-218ENST00000641491 SLC16A7O60669 478 aa11.48□□□□□ -0.57
PHGDH-218ENST00000641491 KHDRBS3O75525 346 aaKnown RBP11.48□□□□□ -0.57
PHGDH-218ENST00000641491 IGHV3-9P01782 118 aa11.48□□□□□ -0.57
PHGDH-218ENST00000641491 IL32P24001 234 aa11.48□□□□□ -0.57
PHGDH-218ENST00000641491 CEACAM8P31997 349 aaPredicted RBP11.48□□□□□ -0.57
PHGDH-218ENST00000641491 OR3A2P47893 321 aa11.48□□□□□ -0.57
PHGDH-218ENST00000641491 UQCRFS1P47985 274 aa11.48□□□□□ -0.57
PHGDH-218ENST00000641491 BLVRAP53004 296 aa11.48□□□□□ -0.57
PHGDH-218ENST00000641491 SH3BGRP55822 239 aaPredicted RBP11.48□□□□□ -0.57
PHGDH-218ENST00000641491 GLO1Q04760 184 aa11.48□□□□□ -0.57
PHGDH-218ENST00000641491 FAPQ12884 760 aa11.48□□□□□ -0.57
PHGDH-218ENST00000641491 SLC25A35Q3KQZ1 300 aa11.48□□□□□ -0.57
PHGDH-218ENST00000641491 MESTQ5EB52 335 aa11.48□□□□□ -0.57
PHGDH-218ENST00000641491 C6orf52Q5T4I8 152 aa11.48□□□□□ -0.57
PHGDH-218ENST00000641491 MEDAGQ5VYS4 303 aa11.48□□□□□ -0.57
PHGDH-218ENST00000641491 VWA1Q6PCB0 445 aa11.48□□□□□ -0.57
PHGDH-218ENST00000641491 CLEC18BQ6UXF7 455 aa11.48□□□□□ -0.57
PHGDH-218ENST00000641491 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.48□□□□□ -0.57
PHGDH-218ENST00000641491 LUZP2Q86TE4 346 aa11.48□□□□□ -0.57
PHGDH-218ENST00000641491 RPRMLQ8N4K4 120 aa11.48□□□□□ -0.57
PHGDH-218ENST00000641491 CLEC18CQ8NCF0 446 aa11.48□□□□□ -0.57
PHGDH-218ENST00000641491 OR6K6Q8NGW6 343 aa11.48□□□□□ -0.57
PHGDH-218ENST00000641491 ZNF519Q8TB69 540 aa11.48□□□□□ -0.57
PHGDH-218ENST00000641491 TMEM163Q8TC26 289 aa11.48□□□□□ -0.57
PHGDH-218ENST00000641491 NANOS1Q8WY41 292 aaKnown RBP11.48□□□□□ -0.57
PHGDH-218ENST00000641491 NSMAFQ92636 917 aa11.48□□□□□ -0.57
PHGDH-218ENST00000641491 HRASLS5Q96KN8 279 aa11.48□□□□□ -0.57
PHGDH-218ENST00000641491 PSMG3-AS1Q96PY0 264 aa11.48□□□□□ -0.57
PHGDH-218ENST00000641491 SNX18Q96RF0 628 aa11.48□□□□□ -0.57
PHGDH-218ENST00000641491 IL4I1Q96RQ9 567 aa11.48□□□□□ -0.57
PHGDH-218ENST00000641491 SYT4Q9H2B2 425 aa11.48□□□□□ -0.57
PHGDH-218ENST00000641491 OR51V1Q9H2C8 321 aa11.48□□□□□ -0.57
PHGDH-218ENST00000641491 FN3KQ9H479 309 aa11.48□□□□□ -0.57
PHGDH-218ENST00000641491 SEC61A2Q9H9S3 476 aa11.48□□□□□ -0.57
PHGDH-218ENST00000641491 A0A0G2JNJ9 132 aa11.47□□□□□ -0.57
PHGDH-218ENST00000641491 FAM90A27PA6NNH2 459 aa11.47□□□□□ -0.57
PHGDH-218ENST00000641491 KDM4EB2RXH2 506 aaPredicted RBP11.47□□□□□ -0.57
PHGDH-218ENST00000641491 AGFG2O95081 481 aa11.47□□□□□ -0.57
PHGDH-218ENST00000641491 CNOT4O95628 575 aaKnown RBP11.47□□□□□ -0.57
PHGDH-218ENST00000641491 QDPRP09417 244 aa11.47□□□□□ -0.57
PHGDH-218ENST00000641491 PGA4P0DJD7 388 aa11.47□□□□□ -0.57
PHGDH-218ENST00000641491 PGA3P0DJD8 388 aa11.47□□□□□ -0.57
PHGDH-218ENST00000641491 CD8BP10966 210 aa11.47□□□□□ -0.57
PHGDH-218ENST00000641491 ZNF823P16415 610 aa11.47□□□□□ -0.57
PHGDH-218ENST00000641491 CAPZA2P47755 286 aa11.47□□□□□ -0.57
PHGDH-218ENST00000641491 FXYD6P3P58550 94 aa11.47□□□□□ -0.57
PHGDH-218ENST00000641491 ROR2Q01974 943 aaKnown RBP11.47□□□□□ -0.57
PHGDH-218ENST00000641491 CRMP1Q14194 572 aa11.47□□□□□ -0.57
PHGDH-218ENST00000641491 ARMC4Q5T2S8 1044 aa11.47□□□□□ -0.57
PHGDH-218ENST00000641491 FBXW9Q5XUX1 488 aa11.47□□□□□ -0.57
PHGDH-218ENST00000641491 C12orf73Q69YU5 71 aa11.47□□□□□ -0.57
PHGDH-218ENST00000641491 ACSM5Q6NUN0 579 aa11.47□□□□□ -0.57
PHGDH-218ENST00000641491 PLBD1Q6P4A8 553 aa11.47□□□□□ -0.57
PHGDH-218ENST00000641491 FAM122BQ7Z309 247 aa11.47□□□□□ -0.57
PHGDH-218ENST00000641491 NUFIP2Q7Z417 695 aaKnown RBP11.47□□□□□ -0.57
PHGDH-218ENST00000641491 MRGPRGQ86SM5 289 aa11.47□□□□□ -0.57
PHGDH-218ENST00000641491 C20orf196Q8IYI0 205 aa11.47□□□□□ -0.57
PHGDH-218ENST00000641491 CYB561A3Q8NBI2 242 aa11.47□□□□□ -0.57
PHGDH-218ENST00000641491 SLC37A3Q8NCC5 494 aa11.47□□□□□ -0.57
PHGDH-218ENST00000641491 HDAC2Q92769 488 aaKnown RBP11.47□□□□□ -0.57
PHGDH-218ENST00000641491 CNBD2Q96M20 576 aa11.47□□□□□ -0.57
PHGDH-218ENST00000641491 DMRTA2Q96SC8 542 aa11.47□□□□□ -0.57
PHGDH-218ENST00000641491 CDADC1Q9BWV3 514 aa11.47□□□□□ -0.57
PHGDH-218ENST00000641491 LINC00470Q9BZP3 86 aa11.47□□□□□ -0.57
PHGDH-218ENST00000641491 CRLF2Q9HC73 371 aa11.47□□□□□ -0.57
PHGDH-218ENST00000641491 RASSF1Q9NS23 344 aa11.47□□□□□ -0.57
PHGDH-218ENST00000641491 GALNT8Q9NY28 637 aa11.47□□□□□ -0.57
PHGDH-218ENST00000641491 Q9UFV3 132 aa11.47□□□□□ -0.57
PHGDH-218ENST00000641491 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.47□□□□□ -0.57
PHGDH-218ENST00000641491 GPR52Q9Y2T5 361 aa11.47□□□□□ -0.57
PHGDH-218ENST00000641491 HSPE1-MOB4S4R3N1 261 aa11.47□□□□□ -0.57
PHGDH-218ENST00000641491 ZNF407Q9C0G0 2248 aa11.47□□□□□ -0.57
PHGDH-218ENST00000641491 ICE1Q9Y2F5 2266 aa11.46□□□□□ -0.57
PHGDH-218ENST00000641491 SLC22A23A1A5C7 686 aa11.46□□□□□ -0.57
PHGDH-218ENST00000641491 SLC22A31A6NKX4 558 aa11.46□□□□□ -0.57
PHGDH-218ENST00000641491 MSTNO14793 375 aa11.46□□□□□ -0.57
PHGDH-218ENST00000641491 TMCC2O75069 709 aa11.46□□□□□ -0.57
PHGDH-218ENST00000641491 TP53P04637 393 aaPredicted RBP11.46□□□□□ -0.57
PHGDH-218ENST00000641491 NPR2P20594 1047 aa11.46□□□□□ -0.57
PHGDH-218ENST00000641491 POLR2IP36954 125 aaKnown RBP11.46□□□□□ -0.57
PHGDH-218ENST00000641491 KIR2DL2P43627 348 aaPredicted RBP11.46□□□□□ -0.57
PHGDH-218ENST00000641491 CDH11P55287 796 aa11.46□□□□□ -0.57
PHGDH-218ENST00000641491 UBE2NP61088 152 aaKnown RBP11.46□□□□□ -0.57
PHGDH-218ENST00000641491 FOXF2Q12947 444 aa11.46□□□□□ -0.57
PHGDH-218ENST00000641491 FHL1Q13642 323 aa11.46□□□□□ -0.57
PHGDH-218ENST00000641491 TFAP2EQ6VUC0 442 aa11.46□□□□□ -0.57
PHGDH-218ENST00000641491 THAP5Q7Z6K1 395 aa11.46□□□□□ -0.57
PHGDH-218ENST00000641491 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.46□□□□□ -0.57
PHGDH-218ENST00000641491 CCDC71Q8IV32 467 aaPredicted RBP11.46□□□□□ -0.57
PHGDH-218ENST00000641491 CPOQ8IVL8 374 aa11.46□□□□□ -0.57
PHGDH-218ENST00000641491 ZIC4Q8N9L1 334 aa11.46□□□□□ -0.57
PHGDH-218ENST00000641491 OR9Q1Q8NGQ5 310 aa11.46□□□□□ -0.57
PHGDH-218ENST00000641491 KISS1RQ969F8 398 aaPredicted RBP11.46□□□□□ -0.57
PHGDH-218ENST00000641491 MCHR2Q969V1 340 aa11.46□□□□□ -0.57
PHGDH-218ENST00000641491 CCDC120Q96HB5 630 aa11.46□□□□□ -0.57
PHGDH-218ENST00000641491 KCNK17Q96T54 332 aa11.46□□□□□ -0.57
PHGDH-218ENST00000641491 MYCBPQ99417 103 aaPredicted RBP11.46□□□□□ -0.57
PHGDH-218ENST00000641491 PITX2Q99697 317 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms