RNA–Protein interactions for RNA: ENST00000641455.1

PHGDH-217, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 312 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-217ENST00000641455 EGR3Q06889 387 aa6.57□□□□□ -1.36
PHGDH-217ENST00000641455 ZMYND11Q15326 602 aa6.57□□□□□ -1.36
PHGDH-217ENST00000641455 SYPL1Q16563 259 aa6.57□□□□□ -1.36
PHGDH-217ENST00000641455 SMU1Q2TAY7 513 aa6.57□□□□□ -1.36
PHGDH-217ENST00000641455 ZNF718Q3SXZ3 478 aa6.57□□□□□ -1.36
PHGDH-217ENST00000641455 SPRNQ5BIV9 151 aa6.57□□□□□ -1.36
PHGDH-217ENST00000641455 IL23RQ5VWK5 629 aa6.57□□□□□ -1.36
PHGDH-217ENST00000641455 AP1ARQ63HQ0 302 aa6.57□□□□□ -1.36
PHGDH-217ENST00000641455 DHRS7BQ6IAN0 325 aaPredicted RBP6.57□□□□□ -1.36
PHGDH-217ENST00000641455 Q6ZSV7 163 aa6.57□□□□□ -1.36
PHGDH-217ENST00000641455 ANKRD46Q86W74 232 aa6.57□□□□□ -1.36
PHGDH-217ENST00000641455 PEX5LQ8IYB4 626 aa6.57□□□□□ -1.36
PHGDH-217ENST00000641455 FNDC5Q8NAU1 212 aa6.57□□□□□ -1.36
PHGDH-217ENST00000641455 TWIST2Q8WVJ9 160 aa6.57□□□□□ -1.36
PHGDH-217ENST00000641455 IPCEF1Q8WWN9 437 aaPredicted RBP6.57□□□□□ -1.36
PHGDH-217ENST00000641455 RAB40AQ8WXH6 277 aa6.57□□□□□ -1.36
PHGDH-217ENST00000641455 THOC1Q96FV9 657 aaKnown RBP6.57□□□□□ -1.36
PHGDH-217ENST00000641455 MARS2Q96GW9 593 aaKnown RBP6.57□□□□□ -1.36
PHGDH-217ENST00000641455 SH3GL3Q99963 347 aa6.57□□□□□ -1.36
PHGDH-217ENST00000641455 PCGF1Q9BSM1 259 aa6.57□□□□□ -1.36
PHGDH-217ENST00000641455 MECRQ9BV79 373 aa6.57□□□□□ -1.36
PHGDH-217ENST00000641455 PTDSS2Q9BVG9 487 aa6.57□□□□□ -1.36
PHGDH-217ENST00000641455 C1orf198Q9H425 327 aa6.57□□□□□ -1.36
PHGDH-217ENST00000641455 PRDM13Q9H4Q3 707 aa6.57□□□□□ -1.36
PHGDH-217ENST00000641455 MARCOQ9UEW3 520 aaPredicted RBP6.57□□□□□ -1.36
PHGDH-217ENST00000641455 BIRC6Q9NR09 4857 aa6.56□□□□□ -1.36
PHGDH-217ENST00000641455 A0A087WUV0 522 aaPredicted RBP6.56□□□□□ -1.36
PHGDH-217ENST00000641455 TMEM233B4DJY2 109 aa6.56□□□□□ -1.36
PHGDH-217ENST00000641455 XPNPEP2O43895 674 aa6.56□□□□□ -1.36
PHGDH-217ENST00000641455 NPIPB7O75200 414 aa6.56□□□□□ -1.36
PHGDH-217ENST00000641455 PTHP01270 115 aa6.56□□□□□ -1.36
PHGDH-217ENST00000641455 IGHV4-59P01825 116 aa6.56□□□□□ -1.36
PHGDH-217ENST00000641455 NR2F1P10589 423 aa6.56□□□□□ -1.36
PHGDH-217ENST00000641455 THRBP10828 461 aa6.56□□□□□ -1.36
PHGDH-217ENST00000641455 HLA-DOBP13765 273 aa6.56□□□□□ -1.36
PHGDH-217ENST00000641455 UQCRC2P22695 453 aa6.56□□□□□ -1.36
PHGDH-217ENST00000641455 TNFSF4P23510 183 aa6.56□□□□□ -1.36
PHGDH-217ENST00000641455 APLNRP35414 380 aa6.56□□□□□ -1.36
PHGDH-217ENST00000641455 MDH2P40926 338 aaKnown RBP6.56□□□□□ -1.36
PHGDH-217ENST00000641455 ACAA2P42765 397 aaKnown RBP6.56□□□□□ -1.36
PHGDH-217ENST00000641455 MMP15P51511 669 aa6.56□□□□□ -1.36
PHGDH-217ENST00000641455 HSF2Q03933 536 aa6.56□□□□□ -1.36
PHGDH-217ENST00000641455 ZMAT1Q5H9K5 638 aa6.56□□□□□ -1.36
PHGDH-217ENST00000641455 DEFB121Q5J5C9 76 aa6.56□□□□□ -1.36
PHGDH-217ENST00000641455 THEM4Q5T1C6 240 aa6.56□□□□□ -1.36
PHGDH-217ENST00000641455 KANK2Q63ZY3 851 aa6.56□□□□□ -1.36
PHGDH-217ENST00000641455 ZNF836Q6ZNA1 936 aa6.56□□□□□ -1.36
PHGDH-217ENST00000641455 TIFABQ6ZNK6 161 aa6.56□□□□□ -1.36
PHGDH-217ENST00000641455 GDPGP1Q6ZNW5 385 aa6.56□□□□□ -1.36
PHGDH-217ENST00000641455 H1FNTQ75WM6 255 aaPredicted RBP6.56□□□□□ -1.36
PHGDH-217ENST00000641455 VASH1Q7L8A9 365 aaPredicted RBP6.56□□□□□ -1.36
PHGDH-217ENST00000641455 ZNF627Q7L945 461 aa6.56□□□□□ -1.36
PHGDH-217ENST00000641455 SLC16A14Q7RTX9 510 aa6.56□□□□□ -1.36
PHGDH-217ENST00000641455 PIWIL3Q7Z3Z3 882 aaKnown RBP6.56□□□□□ -1.36
PHGDH-217ENST00000641455 LRRC28Q86X40 367 aaPredicted RBP6.56□□□□□ -1.36
PHGDH-217ENST00000641455 VRK2Q86Y07 508 aa6.56□□□□□ -1.36
PHGDH-217ENST00000641455 MUC20Q8N307 709 aaPredicted RBP6.56□□□□□ -1.36
PHGDH-217ENST00000641455 SLC22A24Q8N4F4 322 aa6.56□□□□□ -1.36
PHGDH-217ENST00000641455 C11orf44Q8N8P7 122 aa6.56□□□□□ -1.36
PHGDH-217ENST00000641455 RBM15BQ8NDT2 890 aaKnown RBP6.56□□□□□ -1.36
PHGDH-217ENST00000641455 AGR3Q8TD06 166 aa6.56□□□□□ -1.36
PHGDH-217ENST00000641455 PHF21AQ96BD5 680 aa6.56□□□□□ -1.36
PHGDH-217ENST00000641455 TXNDC15Q96J42 360 aa6.56□□□□□ -1.36
PHGDH-217ENST00000641455 PLEKHA8Q96JA3 519 aa6.56□□□□□ -1.36
PHGDH-217ENST00000641455 LRR1Q96L50 414 aa6.56□□□□□ -1.36
PHGDH-217ENST00000641455 TRNT1Q96Q11 434 aaKnown RBP6.56□□□□□ -1.36
PHGDH-217ENST00000641455 NUDT16L1Q9BRJ7 211 aaKnown RBP6.56□□□□□ -1.36
PHGDH-217ENST00000641455 SLC35A5Q9BS91 424 aa6.56□□□□□ -1.36
PHGDH-217ENST00000641455 FUT8Q9BYC5 575 aa6.56□□□□□ -1.36
PHGDH-217ENST00000641455 SLC19A3Q9BZV2 496 aa6.56□□□□□ -1.36
PHGDH-217ENST00000641455 SLC38A1Q9H2H9 487 aa6.56□□□□□ -1.36
PHGDH-217ENST00000641455 TOR3AQ9H497 397 aa6.56□□□□□ -1.36
PHGDH-217ENST00000641455 CACYBPQ9HB71 228 aaKnown RBP6.56□□□□□ -1.36
PHGDH-217ENST00000641455 MSL2Q9HCI7 577 aa6.56□□□□□ -1.36
PHGDH-217ENST00000641455 TCF7L2Q9NQB0 619 aa6.56□□□□□ -1.36
PHGDH-217ENST00000641455 CYSLTR2Q9NS75 346 aa6.56□□□□□ -1.36
PHGDH-217ENST00000641455 ZDHHC18Q9NUE0 388 aa6.56□□□□□ -1.36
PHGDH-217ENST00000641455 EIF3KQ9UBQ5 218 aaKnown RBP6.56□□□□□ -1.36
PHGDH-217ENST00000641455 RPS6KB2Q9UBS0 482 aa6.56□□□□□ -1.36
PHGDH-217ENST00000641455 EMCNQ9ULC0 261 aa6.56□□□□□ -1.36
PHGDH-217ENST00000641455 DNAJC15Q9Y5T4 150 aa6.56□□□□□ -1.36
PHGDH-217ENST00000641455 ZNF816-ZNF321PA0A0X1KG74 233 aa6.55□□□□□ -1.36
PHGDH-217ENST00000641455 CDHR4A6H8M9 788 aa6.55□□□□□ -1.36
PHGDH-217ENST00000641455 HMGN4O00479 90 aa6.55□□□□□ -1.36
PHGDH-217ENST00000641455 RNASET2O00584 256 aaKnown RBP6.55□□□□□ -1.36
PHGDH-217ENST00000641455 OR2T1O43869 369 aa6.55□□□□□ -1.36
PHGDH-217ENST00000641455 TIMM8AO60220 97 aaPredicted RBP6.55□□□□□ -1.36
PHGDH-217ENST00000641455 GLRA3O75311 464 aa6.55□□□□□ -1.36
PHGDH-217ENST00000641455 MFN2O95140 757 aa6.55□□□□□ -1.36
PHGDH-217ENST00000641455 SNAP29O95721 258 aa6.55□□□□□ -1.36
PHGDH-217ENST00000641455 HPRP00739 348 aa6.55□□□□□ -1.36
PHGDH-217ENST00000641455 SFTPBP07988 381 aa6.55□□□□□ -1.36
PHGDH-217ENST00000641455 PRG2P13727 222 aa6.55□□□□□ -1.36
PHGDH-217ENST00000641455 FUT4P22083 530 aa6.55□□□□□ -1.36
PHGDH-217ENST00000641455 RPS4Y1P22090 263 aaKnown RBP6.55□□□□□ -1.36
PHGDH-217ENST00000641455 ARRB2P32121 409 aa6.55□□□□□ -1.36
PHGDH-217ENST00000641455 LIPAP38571 399 aa6.55□□□□□ -1.36
PHGDH-217ENST00000641455 ANXA11P50995 505 aaKnown RBP6.55□□□□□ -1.36
PHGDH-217ENST00000641455 BPIFB3P59826 476 aa6.55□□□□□ -1.36
PHGDH-217ENST00000641455 DNAJB13P59910 316 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms