RNA–Protein interactions for RNA: ENST00000640872.1

PAX6-280, Transcript of paired box 6, humanhuman

TSL 1 (best)

Gene PAX6, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-280ENST00000640872 A0A1B0GTI1 187 aa12.42□□□□□ -0.42
PAX6-280ENST00000640872 FOXS1O43638 330 aa12.42□□□□□ -0.42
PAX6-280ENST00000640872 GP1BAP07359 652 aa12.42□□□□□ -0.42
PAX6-280ENST00000640872 SRSF4Q08170 494 aaKnown RBP12.42□□□□□ -0.42
PAX6-280ENST00000640872 ZNF345Q14585 488 aa12.42□□□□□ -0.42
PAX6-280ENST00000640872 ELP2Q6IA86 826 aa12.42□□□□□ -0.42
PAX6-280ENST00000640872 PSRC1Q6PGN9 363 aaPredicted RBP12.42□□□□□ -0.42
PAX6-280ENST00000640872 JAZF1Q86VZ6 243 aa12.42□□□□□ -0.42
PAX6-280ENST00000640872 LRRC75AQ8NAA5 344 aa12.42□□□□□ -0.42
PAX6-280ENST00000640872 GPR148Q8TDV2 347 aa12.42□□□□□ -0.42
PAX6-280ENST00000640872 APOOQ9BUR5 198 aa12.42□□□□□ -0.42
PAX6-280ENST00000640872 TWSG1Q9GZX9 223 aa12.42□□□□□ -0.42
PAX6-280ENST00000640872 SAV1Q9H4B6 383 aaPredicted RBP12.42□□□□□ -0.42
PAX6-280ENST00000640872 ATG2BQ96BY7 2078 aa12.42□□□□□ -0.42
PAX6-280ENST00000640872 TMEM82A0PJX8 343 aa12.42□□□□□ -0.42
PAX6-280ENST00000640872 TMEM212A6NML5 194 aa12.42□□□□□ -0.42
PAX6-280ENST00000640872 EFCAB7A8K855 629 aa12.42□□□□□ -0.42
PAX6-280ENST00000640872 C5orf67F2Z3F1 127 aa12.42□□□□□ -0.42
PAX6-280ENST00000640872 DCTN6O00399 190 aa12.42□□□□□ -0.42
PAX6-280ENST00000640872 SRPX2O60687 465 aaPredicted RBP12.42□□□□□ -0.42
PAX6-280ENST00000640872 ITGA5P08648 1049 aa12.42□□□□□ -0.42
PAX6-280ENST00000640872 S1PR1P21453 382 aa12.42□□□□□ -0.42
PAX6-280ENST00000640872 AQP2P41181 271 aa12.42□□□□□ -0.42
PAX6-280ENST00000640872 WASP42768 502 aa12.42□□□□□ -0.42
PAX6-280ENST00000640872 FNTBP49356 437 aa12.42□□□□□ -0.42
PAX6-280ENST00000640872 ARHGDIBP52566 201 aa12.42□□□□□ -0.42
PAX6-280ENST00000640872 KIR2DS3Q14952 304 aa12.42□□□□□ -0.42
PAX6-280ENST00000640872 C9orf50Q5SZB4 431 aa12.42□□□□□ -0.42
PAX6-280ENST00000640872 FIGLAQ6QHK4 219 aa12.42□□□□□ -0.42
PAX6-280ENST00000640872 VITQ6UXI7 678 aa12.42□□□□□ -0.42
PAX6-280ENST00000640872 BEST3Q8N1M1 668 aa12.42□□□□□ -0.42
PAX6-280ENST00000640872 CA13Q8N1Q1 262 aa12.42□□□□□ -0.42
PAX6-280ENST00000640872 PRSS35Q8N3Z0 413 aa12.42□□□□□ -0.42
PAX6-280ENST00000640872 ZNF676Q8N7Q3 588 aa12.42□□□□□ -0.42
PAX6-280ENST00000640872 STEAP2Q8NFT2 490 aa12.42□□□□□ -0.42
PAX6-280ENST00000640872 OR5M8Q8NGP6 311 aa12.42□□□□□ -0.42
PAX6-280ENST00000640872 C3orf49Q96BT1 292 aa12.42□□□□□ -0.42
PAX6-280ENST00000640872 COMMD4Q9H0A8 199 aa12.42□□□□□ -0.42
PAX6-280ENST00000640872 MYOZ1Q9NP98 299 aaPredicted RBP12.42□□□□□ -0.42
PAX6-280ENST00000640872 UPB1Q9UBR1 384 aa12.42□□□□□ -0.42
PAX6-280ENST00000640872 TNFSF18Q9UNG2 199 aa12.42□□□□□ -0.42
PAX6-280ENST00000640872 H0YGG7 62 aa12.41□□□□□ -0.42
PAX6-280ENST00000640872 BCL2L11O43521 198 aa12.41□□□□□ -0.42
PAX6-280ENST00000640872 CDC40O60508 579 aaKnown RBP eCLIP12.41□□□□□ -0.42
PAX6-280ENST00000640872 LUMP51884 338 aaPredicted RBP12.41□□□□□ -0.42
PAX6-280ENST00000640872 ADPRHP54922 357 aa12.41□□□□□ -0.42
PAX6-280ENST00000640872 ARF3P61204 181 aaPredicted RBP12.41□□□□□ -0.42
PAX6-280ENST00000640872 SGCGQ13326 291 aa12.41□□□□□ -0.42
PAX6-280ENST00000640872 KCNAB1Q14722 419 aa12.41□□□□□ -0.42
PAX6-280ENST00000640872 TCEA2Q15560 299 aa12.41□□□□□ -0.42
PAX6-280ENST00000640872 CLVS2Q5SYC1 327 aa12.41□□□□□ -0.42
PAX6-280ENST00000640872 GLT8D1Q68CQ7 371 aa12.41□□□□□ -0.42
PAX6-280ENST00000640872 ASB16Q96NS5 453 aa12.41□□□□□ -0.42
PAX6-280ENST00000640872 OR2M4Q96R27 311 aa12.41□□□□□ -0.42
PAX6-280ENST00000640872 ULBP3Q9BZM4 244 aa12.41□□□□□ -0.42
PAX6-280ENST00000640872 SLC6A17Q9H1V8 727 aa12.41□□□□□ -0.42
PAX6-280ENST00000640872 TMEM185BQ9H7F4 350 aa12.41□□□□□ -0.42
PAX6-280ENST00000640872 SFXN1Q9H9B4 322 aa12.41□□□□□ -0.42
PAX6-280ENST00000640872 SLC17A5Q9NRA2 495 aa12.41□□□□□ -0.42
PAX6-280ENST00000640872 IKZF2Q9UKS7 526 aa12.41□□□□□ -0.42
PAX6-280ENST00000640872 HIF3AQ9Y2N7 669 aa12.41□□□□□ -0.42
PAX6-280ENST00000640872 KANTRA0A1W2PQU2 76 aa12.41□□□□□ -0.42
PAX6-280ENST00000640872 OR5H14A6NHG9 310 aa12.41□□□□□ -0.42
PAX6-280ENST00000640872 H3BSH0 61 aa12.41□□□□□ -0.42
PAX6-280ENST00000640872 OR2F2O95006 317 aa12.41□□□□□ -0.42
PAX6-280ENST00000640872 CD14P08571 375 aa12.41□□□□□ -0.42
PAX6-280ENST00000640872 SLC25A4P12235 298 aa12.41□□□□□ -0.42
PAX6-280ENST00000640872 APEHP13798 732 aaKnown RBP12.41□□□□□ -0.42
PAX6-280ENST00000640872 C5AR1P21730 350 aa12.41□□□□□ -0.42
PAX6-280ENST00000640872 KIR3DL2P43630 455 aa12.41□□□□□ -0.42
PAX6-280ENST00000640872 STARP49675 285 aa12.41□□□□□ -0.42
PAX6-280ENST00000640872 TAS2R19P59542 299 aa12.41□□□□□ -0.42
PAX6-280ENST00000640872 ACTBP60709 375 aa12.41□□□□□ -0.42
PAX6-280ENST00000640872 RPS21P63220 83 aaKnown RBP12.41□□□□□ -0.42
PAX6-280ENST00000640872 ACTG1P63261 375 aa12.41□□□□□ -0.42
PAX6-280ENST00000640872 OR2F1Q13607 317 aa12.41□□□□□ -0.42
PAX6-280ENST00000640872 PDGFRLQ15198 375 aa12.41□□□□□ -0.42
PAX6-280ENST00000640872 C2orf76Q3KRA6 126 aa12.41□□□□□ -0.42
PAX6-280ENST00000640872 OR2W3Q7Z3T1 314 aa12.41□□□□□ -0.42
PAX6-280ENST00000640872 PHYHIPLQ96FC7 376 aa12.41□□□□□ -0.42
PAX6-280ENST00000640872 ZNF75AQ96N20 296 aa12.41□□□□□ -0.42
PAX6-280ENST00000640872 ZFYVE21Q9BQ24 234 aa12.41□□□□□ -0.42
PAX6-280ENST00000640872 SLC19A3Q9BZV2 496 aa12.41□□□□□ -0.42
PAX6-280ENST00000640872 GPN3Q9UHW5 284 aaPredicted RBP12.41□□□□□ -0.42
PAX6-280ENST00000640872 CDV3Q9UKY7 258 aaKnown RBP12.41□□□□□ -0.42
PAX6-280ENST00000640872 SPEGQ15772 3267 aa12.4□□□□□ -0.42
PAX6-280ENST00000640872 LOC100289279A0A1B0GTE1 492 aa12.4□□□□□ -0.42
PAX6-280ENST00000640872 A0A1W2PQU0 124 aa12.4□□□□□ -0.42
PAX6-280ENST00000640872 PRSS38A1L453 326 aa12.4□□□□□ -0.42
PAX6-280ENST00000640872 TVP23AA6NH52 213 aa12.4□□□□□ -0.42
PAX6-280ENST00000640872 BLOC1S5-TXNDC5H3BN57 136 aa12.4□□□□□ -0.42
PAX6-280ENST00000640872 RASGRP1O95267 797 aa12.4□□□□□ -0.42
PAX6-280ENST00000640872 ADH1BP00325 375 aa12.4□□□□□ -0.42
PAX6-280ENST00000640872 SLC35E2P0CK97 266 aa12.4□□□□□ -0.42
PAX6-280ENST00000640872 ALOX5APP20292 161 aa12.4□□□□□ -0.42
PAX6-280ENST00000640872 SDHAP31040 664 aa12.4□□□□□ -0.42
PAX6-280ENST00000640872 PPIAP62937 165 aaKnown RBP12.4□□□□□ -0.42
PAX6-280ENST00000640872 TOMM20Q15388 145 aa12.4□□□□□ -0.42
PAX6-280ENST00000640872 ZNHIT3Q15649 155 aaPredicted RBP12.4□□□□□ -0.42
PAX6-280ENST00000640872 ODF4Q2M2E3 257 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms