RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 WDR5BQ86VZ2 330 aa17.02■□□□□ 0.32
SCARB2-213ENST00000638680 KCNRGQ8N5I3 272 aa17.02■□□□□ 0.32
SCARB2-213ENST00000638680 C2CD4CQ8TF44 421 aa17.02■□□□□ 0.32
SCARB2-213ENST00000638680 LCORQ96JN0 433 aaPredicted RBP17.02■□□□□ 0.32
SCARB2-213ENST00000638680 HMGN4O00479 90 aa17.02■□□□□ 0.32
SCARB2-213ENST00000638680 CLDN1O95832 211 aa17.02■□□□□ 0.32
SCARB2-213ENST00000638680 CATR1Q13166 79 aa17.02■□□□□ 0.32
SCARB2-213ENST00000638680 TESK1Q15569 626 aa17.02■□□□□ 0.32
SCARB2-213ENST00000638680 DCXRQ7Z4W1 244 aa17.02■□□□□ 0.32
SCARB2-213ENST00000638680 CPEB2Q7Z5Q1 589 aaKnown RBP17.02■□□□□ 0.32
SCARB2-213ENST00000638680 MRPL43Q8N983 215 aaKnown RBP17.02■□□□□ 0.32
SCARB2-213ENST00000638680 SUMF1Q8NBK3 374 aa17.02■□□□□ 0.32
SCARB2-213ENST00000638680 PARP12Q9H0J9 701 aaKnown RBP17.02■□□□□ 0.32
SCARB2-213ENST00000638680 PCYT1BQ9Y5K3 369 aaPredicted RBP17.02■□□□□ 0.32
SCARB2-213ENST00000638680 CASP6P55212 293 aa17.02■□□□□ 0.32
SCARB2-213ENST00000638680 AKR1C1Q04828 323 aa17.02■□□□□ 0.32
SCARB2-213ENST00000638680 FAM155AB1AL88 458 aaPredicted RBP17.02■□□□□ 0.31
SCARB2-213ENST00000638680 ARG2P78540 354 aa17.02■□□□□ 0.31
SCARB2-213ENST00000638680 MZT1Q08AG7 82 aa17.02■□□□□ 0.31
SCARB2-213ENST00000638680 LANCL3Q6ZV70 420 aa17.02■□□□□ 0.31
SCARB2-213ENST00000638680 TGIF2Q9GZN2 237 aa17.02■□□□□ 0.31
SCARB2-213ENST00000638680 ASB1Q9Y576 335 aa17.02■□□□□ 0.31
SCARB2-213ENST00000638680 WIF1Q9Y5W5 379 aa17.02■□□□□ 0.31
SCARB2-213ENST00000638680 ZAR1LA6NP61 321 aa17.02■□□□□ 0.31
SCARB2-213ENST00000638680 EDN3P14138 238 aa17.02■□□□□ 0.31
SCARB2-213ENST00000638680 CPT2P23786 658 aa17.02■□□□□ 0.31
SCARB2-213ENST00000638680 RAD52P43351 418 aa17.02■□□□□ 0.31
SCARB2-213ENST00000638680 GABREP78334 506 aa17.02■□□□□ 0.31
SCARB2-213ENST00000638680 CDC20Q12834 499 aa17.02■□□□□ 0.31
SCARB2-213ENST00000638680 PHLDA2Q53GA4 152 aa17.02■□□□□ 0.31
SCARB2-213ENST00000638680 LPCAT3Q6P1A2 487 aa17.02■□□□□ 0.31
SCARB2-213ENST00000638680 RHOUQ7L0Q8 258 aa17.02■□□□□ 0.31
SCARB2-213ENST00000638680 TMEM179BQ7Z7N9 219 aa17.02■□□□□ 0.31
SCARB2-213ENST00000638680 FAM26EQ8N5C1 309 aa17.02■□□□□ 0.31
SCARB2-213ENST00000638680 OR10Z1Q8NGY1 313 aa17.02■□□□□ 0.31
SCARB2-213ENST00000638680 ST8SIA4Q92187 359 aa17.02■□□□□ 0.31
SCARB2-213ENST00000638680 MRPL38Q96DV4 380 aaKnown RBP17.02■□□□□ 0.31
SCARB2-213ENST00000638680 LPLP06858 475 aa17.01■□□□□ 0.31
SCARB2-213ENST00000638680 SBK2P0C263 348 aa17.01■□□□□ 0.31
SCARB2-213ENST00000638680 SLC35E2P0CK97 266 aa17.01■□□□□ 0.31
SCARB2-213ENST00000638680 HOXA1P49639 335 aaPredicted RBP17.01■□□□□ 0.31
SCARB2-213ENST00000638680 PRAMEF20Q5VT98 475 aa17.01■□□□□ 0.31
SCARB2-213ENST00000638680 OPN5Q6U736 354 aa17.01■□□□□ 0.31
SCARB2-213ENST00000638680 TMPRSS7Q7RTY8 843 aa17.01■□□□□ 0.31
SCARB2-213ENST00000638680 SLC43A2Q8N370 569 aa17.01■□□□□ 0.31
SCARB2-213ENST00000638680 RLN3Q8WXF3 142 aa17.01■□□□□ 0.31
SCARB2-213ENST00000638680 PIGTQ969N2 578 aa17.01■□□□□ 0.31
SCARB2-213ENST00000638680 DUSP21Q9H596 190 aa17.01■□□□□ 0.31
SCARB2-213ENST00000638680 CD207Q9UJ71 328 aa17.01■□□□□ 0.31
SCARB2-213ENST00000638680 URGCP-MRPS24S4R325 110 aa17.01■□□□□ 0.31
SCARB2-213ENST00000638680 FITM1A5D6W6 292 aa17.01■□□□□ 0.31
SCARB2-213ENST00000638680 TXNDC12O95881 172 aa17.01■□□□□ 0.31
SCARB2-213ENST00000638680 RAF1P04049 648 aa17.01■□□□□ 0.31
SCARB2-213ENST00000638680 CALCBP10092 127 aa17.01■□□□□ 0.31
SCARB2-213ENST00000638680 GJA4P35212 333 aa17.01■□□□□ 0.31
SCARB2-213ENST00000638680 Q96M85 177 aa17.01■□□□□ 0.31
SCARB2-213ENST00000638680 ADIRFQ15847 76 aa17.01■□□□□ 0.31
SCARB2-213ENST00000638680 CDKN3Q16667 212 aa17.01■□□□□ 0.31
SCARB2-213ENST00000638680 WFDC5Q8TCV5 224 aa17.01■□□□□ 0.31
SCARB2-213ENST00000638680 MAP3K3Q99759 626 aa17.01■□□□□ 0.31
SCARB2-213ENST00000638680 SUCNR1Q9BXA5 334 aa17.01■□□□□ 0.31
SCARB2-213ENST00000638680 EPHX3Q9H6B9 360 aa17.01■□□□□ 0.31
SCARB2-213ENST00000638680 AKIP1Q9NQ31 210 aa17.01■□□□□ 0.31
SCARB2-213ENST00000638680 NECAP2Q9NVZ3 263 aa17.01■□□□□ 0.31
SCARB2-213ENST00000638680 NTNG1Q9Y2I2 539 aa17.01■□□□□ 0.31
SCARB2-213ENST00000638680 OR6C76A6NM76 312 aa17.01■□□□□ 0.31
SCARB2-213ENST00000638680 TGFBR3Q03167 851 aa17.01■□□□□ 0.31
SCARB2-213ENST00000638680 PDZK1IP1Q13113 114 aa17.01■□□□□ 0.31
SCARB2-213ENST00000638680 IHHQ14623 411 aa17.01■□□□□ 0.31
SCARB2-213ENST00000638680 ANGPTL5Q86XS5 388 aa17.01■□□□□ 0.31
SCARB2-213ENST00000638680 OR1S2Q8NGQ3 325 aa17.01■□□□□ 0.31
SCARB2-213ENST00000638680 CTRCQ99895 268 aa17.01■□□□□ 0.31
SCARB2-213ENST00000638680 NXT1Q9UKK6 140 aaKnown RBP17.01■□□□□ 0.31
SCARB2-213ENST00000638680 PLSCR5A0PG75 271 aa17.01■□□□□ 0.31
SCARB2-213ENST00000638680 LAP3P28838 519 aa17.01■□□□□ 0.31
SCARB2-213ENST00000638680 FAM78AQ5JUQ0 283 aa17.01■□□□□ 0.31
SCARB2-213ENST00000638680 MARCH3Q86UD3 253 aa17.01■□□□□ 0.31
SCARB2-213ENST00000638680 GLCCI1Q86VQ1 547 aa17.01■□□□□ 0.31
SCARB2-213ENST00000638680 ZNF439Q8NDP4 499 aa17.01■□□□□ 0.31
SCARB2-213ENST00000638680 RNF170Q96K19 258 aa17.01■□□□□ 0.31
SCARB2-213ENST00000638680 PCDHGA5Q9Y5G8 931 aa17.01■□□□□ 0.31
SCARB2-213ENST00000638680 NSG1A0A0A6YYJ2 146 aa17■□□□□ 0.31
SCARB2-213ENST00000638680 PPP1R2P9O14990 202 aa17■□□□□ 0.31
SCARB2-213ENST00000638680 BAK1Q16611 211 aa17■□□□□ 0.31
SCARB2-213ENST00000638680 MISPQ8IVT2 679 aa17■□□□□ 0.31
SCARB2-213ENST00000638680 ABHD6Q9BV23 337 aa17■□□□□ 0.31
SCARB2-213ENST00000638680 SOCS7O14512 581 aa17■□□□□ 0.31
SCARB2-213ENST00000638680 F11P03951 625 aa17■□□□□ 0.31
SCARB2-213ENST00000638680 AADACP22760 399 aa17■□□□□ 0.31
SCARB2-213ENST00000638680 LIM2P55344 173 aa17■□□□□ 0.31
SCARB2-213ENST00000638680 CNEP1R1Q8N9A8 125 aa17■□□□□ 0.31
SCARB2-213ENST00000638680 ST8SIA2Q92186 375 aa17■□□□□ 0.31
SCARB2-213ENST00000638680 C2orf72A6NCS6 295 aa17■□□□□ 0.31
SCARB2-213ENST00000638680 AIPO00170 330 aa17■□□□□ 0.31
SCARB2-213ENST00000638680 EIF4EP06730 217 aaKnown RBP17■□□□□ 0.31
SCARB2-213ENST00000638680 ADRB1P08588 477 aa17■□□□□ 0.31
SCARB2-213ENST00000638680 CSF3P09919 207 aa17■□□□□ 0.31
SCARB2-213ENST00000638680 TNFSF4P23510 183 aa17■□□□□ 0.31
SCARB2-213ENST00000638680 SLC35A1P78382 337 aa17■□□□□ 0.31
SCARB2-213ENST00000638680 AQP6Q13520 282 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms