RNA–Protein interactions for RNA: ENST00000637004.1

CACNA1A-235, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,829 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-235ENST00000637004 COMMD4Q9H0A8 199 aa14.16□□□□□ -0.14
CACNA1A-235ENST00000637004 EDARQ9UNE0 448 aa14.16□□□□□ -0.14
CACNA1A-235ENST00000637004 TRBV5-7A0A0A0MS05 114 aa14.16□□□□□ -0.14
CACNA1A-235ENST00000637004 PRR32B1ATL7 298 aa14.16□□□□□ -0.14
CACNA1A-235ENST00000637004 IMPA2O14732 288 aa14.16□□□□□ -0.14
CACNA1A-235ENST00000637004 ZNF888P0CJ79 500 aaPredicted RBP14.16□□□□□ -0.14
CACNA1A-235ENST00000637004 POU3F4P49335 361 aa14.16□□□□□ -0.14
CACNA1A-235ENST00000637004 AKR1C2P52895 323 aa14.16□□□□□ -0.14
CACNA1A-235ENST00000637004 PLAURQ03405 335 aa14.16□□□□□ -0.14
CACNA1A-235ENST00000637004 AKR1C1Q04828 323 aa14.16□□□□□ -0.14
CACNA1A-235ENST00000637004 ZNF234Q14588 700 aa14.16□□□□□ -0.14
CACNA1A-235ENST00000637004 LRRC37A5PQ49AS3 106 aa14.16□□□□□ -0.14
CACNA1A-235ENST00000637004 BEX5Q5H9J7 111 aa14.16□□□□□ -0.14
CACNA1A-235ENST00000637004 SLC16A9Q7RTY1 509 aa14.16□□□□□ -0.14
CACNA1A-235ENST00000637004 SKA3Q8IX90 412 aa14.16□□□□□ -0.14
CACNA1A-235ENST00000637004 ZNF614Q8N883 585 aa14.16□□□□□ -0.14
CACNA1A-235ENST00000637004 TMEM229BQ8NBD8 167 aa14.16□□□□□ -0.14
CACNA1A-235ENST00000637004 OR52E1Q8NGJ3 308 aa14.16□□□□□ -0.14
CACNA1A-235ENST00000637004 TMEM106AQ96A25 262 aa14.16□□□□□ -0.14
CACNA1A-235ENST00000637004 GPR174Q9BXC1 333 aa14.16□□□□□ -0.14
CACNA1A-235ENST00000637004 MYEF2Q9P2K5 600 aaKnown RBP14.16□□□□□ -0.14
CACNA1A-235ENST00000637004 NOP16Q9Y3C1 178 aaKnown RBP14.16□□□□□ -0.14
CACNA1A-235ENST00000637004 DENND4AQ7Z401 1863 aa14.16□□□□□ -0.14
CACNA1A-235ENST00000637004 A0A087WV48 116 aa14.15□□□□□ -0.14
CACNA1A-235ENST00000637004 CCL16O15467 120 aa14.15□□□□□ -0.14
CACNA1A-235ENST00000637004 FGF16O43320 207 aa14.15□□□□□ -0.14
CACNA1A-235ENST00000637004 RDH16O75452 317 aa14.15□□□□□ -0.14
CACNA1A-235ENST00000637004 HEXAP06865 529 aa14.15□□□□□ -0.14
CACNA1A-235ENST00000637004 CFPP27918 469 aa14.15□□□□□ -0.14
CACNA1A-235ENST00000637004 CASRP41180 1078 aa14.15□□□□□ -0.14
CACNA1A-235ENST00000637004 GPR143P51810 404 aa14.15□□□□□ -0.14
CACNA1A-235ENST00000637004 EFNB2P52799 333 aa14.15□□□□□ -0.14
CACNA1A-235ENST00000637004 DHRS2Q13268 280 aa14.15□□□□□ -0.14
CACNA1A-235ENST00000637004 ELAVL3Q14576 367 aaKnown RBP14.15□□□□□ -0.14
CACNA1A-235ENST00000637004 FHL5Q5TD97 284 aa14.15□□□□□ -0.14
CACNA1A-235ENST00000637004 ULK3Q6PHR2 472 aa14.15□□□□□ -0.14
CACNA1A-235ENST00000637004 NDUFAF7Q7L592 441 aa14.15□□□□□ -0.14
CACNA1A-235ENST00000637004 ZNF595Q8IYB9 648 aa14.15□□□□□ -0.14
CACNA1A-235ENST00000637004 GPR148Q8TDV2 347 aa14.15□□□□□ -0.14
CACNA1A-235ENST00000637004 PPP1R1CQ8WVI7 109 aa14.15□□□□□ -0.14
CACNA1A-235ENST00000637004 THRSPQ92748 146 aa14.15□□□□□ -0.14
CACNA1A-235ENST00000637004 FGF13Q92913 245 aa14.15□□□□□ -0.14
CACNA1A-235ENST00000637004 ADAD1Q96M93 576 aaKnown RBP14.15□□□□□ -0.14
CACNA1A-235ENST00000637004 CNTNAP3BQ96NU0 1288 aa14.15□□□□□ -0.14
CACNA1A-235ENST00000637004 CMSS1Q9BQ75 279 aaKnown RBP14.15□□□□□ -0.14
CACNA1A-235ENST00000637004 A0A087WV62 115 aa14.15□□□□□ -0.14
CACNA1A-235ENST00000637004 EDDM13A0A1B0GTR0 161 aa14.15□□□□□ -0.14
CACNA1A-235ENST00000637004 GPR89AB7ZAQ6 455 aa14.15□□□□□ -0.14
CACNA1A-235ENST00000637004 CRYBA1P05813 215 aa14.15□□□□□ -0.14
CACNA1A-235ENST00000637004 GPR89BP0CG08 455 aa14.15□□□□□ -0.14
CACNA1A-235ENST00000637004 KCNJ3P48549 501 aa14.15□□□□□ -0.14
CACNA1A-235ENST00000637004 ZNF77Q15935 545 aa14.15□□□□□ -0.14
CACNA1A-235ENST00000637004 FNDC3BQ53EP0 1204 aaKnown RBP14.15□□□□□ -0.14
CACNA1A-235ENST00000637004 LINC01590Q5TEZ4 76 aa14.15□□□□□ -0.14
CACNA1A-235ENST00000637004 ZNF425Q6IV72 752 aa14.15□□□□□ -0.14
CACNA1A-235ENST00000637004 ZNF676Q8N7Q3 588 aa14.15□□□□□ -0.14
CACNA1A-235ENST00000637004 ADAT1Q9BUB4 502 aaKnown RBP14.15□□□□□ -0.14
CACNA1A-235ENST00000637004 HCFC1R1Q9NWW0 138 aa14.15□□□□□ -0.14
CACNA1A-235ENST00000637004 MRM2Q9UI43 246 aaKnown RBP14.15□□□□□ -0.14
CACNA1A-235ENST00000637004 PTPRSQ13332 1948 aa14.15□□□□□ -0.14
CACNA1A-235ENST00000637004 TMEM72A0PK05 275 aa14.14□□□□□ -0.15
CACNA1A-235ENST00000637004 TMEM212A6NML5 194 aa14.14□□□□□ -0.15
CACNA1A-235ENST00000637004 FADS1O60427 444 aa14.14□□□□□ -0.15
CACNA1A-235ENST00000637004 CISD3P0C7P0 127 aa14.14□□□□□ -0.15
CACNA1A-235ENST00000637004 GABRA3P34903 492 aa14.14□□□□□ -0.15
CACNA1A-235ENST00000637004 ATXN7L3Q14CW9 347 aaPredicted RBP14.14□□□□□ -0.15
CACNA1A-235ENST00000637004 TOMM20Q15388 145 aa14.14□□□□□ -0.15
CACNA1A-235ENST00000637004 INPP5JQ15735 1006 aaPredicted RBP14.14□□□□□ -0.15
CACNA1A-235ENST00000637004 HNRNPA1L2Q32P51 320 aaKnown RBP14.14□□□□□ -0.15
CACNA1A-235ENST00000637004 TMEM71Q6P5X7 295 aa14.14□□□□□ -0.15
CACNA1A-235ENST00000637004 OR1J2Q8NGS2 313 aa14.14□□□□□ -0.15
CACNA1A-235ENST00000637004 SPHK1Q9NYA1 384 aa14.14□□□□□ -0.15
CACNA1A-235ENST00000637004 LOC100289279A0A1B0GTE1 492 aa14.14□□□□□ -0.15
CACNA1A-235ENST00000637004 LILRB3O75022 631 aa14.14□□□□□ -0.15
CACNA1A-235ENST00000637004 AMY2AP04746 511 aa14.14□□□□□ -0.15
CACNA1A-235ENST00000637004 S100A9P06702 114 aaKnown RBP14.14□□□□□ -0.15
CACNA1A-235ENST00000637004 SMIM6P0DI80 62 aa14.14□□□□□ -0.15
CACNA1A-235ENST00000637004 ACAA2P42765 397 aaKnown RBP14.14□□□□□ -0.15
CACNA1A-235ENST00000637004 PRKXP51817 358 aa14.14□□□□□ -0.15
CACNA1A-235ENST00000637004 RAB11BQ15907 218 aa14.14□□□□□ -0.15
CACNA1A-235ENST00000637004 ATPAF1Q5TC12 328 aaPredicted RBP14.14□□□□□ -0.15
CACNA1A-235ENST00000637004 LINC00114Q6XXX2 140 aa14.14□□□□□ -0.15
CACNA1A-235ENST00000637004 ZPLD1Q8TCW7 415 aa14.14□□□□□ -0.15
CACNA1A-235ENST00000637004 ZBTB8AQ96BR9 441 aa14.14□□□□□ -0.15
CACNA1A-235ENST00000637004 SEC11CQ9BY50 192 aa14.14□□□□□ -0.15
CACNA1A-235ENST00000637004 LMAN2LQ9H0V9 348 aa14.14□□□□□ -0.15
CACNA1A-235ENST00000637004 SLCO5A1Q9H2Y9 848 aa14.14□□□□□ -0.15
CACNA1A-235ENST00000637004 MSRAQ9UJ68 235 aa14.14□□□□□ -0.15
CACNA1A-235ENST00000637004 OR4C45A6NMZ5 311 aa14.14□□□□□ -0.15
CACNA1A-235ENST00000637004 C1QTNF3-AMACRE9PGA6 284 aa14.14□□□□□ -0.15
CACNA1A-235ENST00000637004 LINC00271P0C7V0 271 aa14.14□□□□□ -0.15
CACNA1A-235ENST00000637004 PDZK1IP1Q13113 114 aa14.14□□□□□ -0.15
CACNA1A-235ENST00000637004 TMPRSS9Q7Z410 1059 aa14.14□□□□□ -0.15
CACNA1A-235ENST00000637004 ZNF511Q8NB15 262 aa14.14□□□□□ -0.15
CACNA1A-235ENST00000637004 KREMEN2Q8NCW0 462 aa14.14□□□□□ -0.15
CACNA1A-235ENST00000637004 FAM3DQ96BQ1 224 aa14.14□□□□□ -0.15
CACNA1A-235ENST00000637004 RASD2Q96D21 266 aa14.14□□□□□ -0.15
CACNA1A-235ENST00000637004 SERINC2Q96SA4 455 aa14.14□□□□□ -0.15
CACNA1A-235ENST00000637004 TLNRD1Q9H1K6 362 aa14.14□□□□□ -0.15
CACNA1A-235ENST00000637004 ATG5Q9H1Y0 275 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms