RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 FAM27E3Q08E93 113 aa14.09□□□□□ -0.15
CLN6-216ENST00000636876 PGGHGQ32M88 737 aa14.09□□□□□ -0.15
CLN6-216ENST00000636876 ADCK1Q86TW2 530 aa14.09□□□□□ -0.15
CLN6-216ENST00000636876 IQCF1Q8N6M8 205 aa14.09□□□□□ -0.15
CLN6-216ENST00000636876 ZNF433Q8N7K0 673 aaPredicted RBP14.09□□□□□ -0.15
CLN6-216ENST00000636876 NMD3Q96D46 503 aaKnown RBP14.09□□□□□ -0.15
CLN6-216ENST00000636876 SLC29A1Q99808 456 aa14.09□□□□□ -0.15
CLN6-216ENST00000636876 CRLF2Q9HC73 371 aa14.09□□□□□ -0.15
CLN6-216ENST00000636876 ENOPH1Q9UHY7 261 aa14.09□□□□□ -0.15
CLN6-216ENST00000636876 PRSS37A4D1T9 235 aa14.08□□□□□ -0.16
CLN6-216ENST00000636876 C16orf97H3BN30 126 aa14.08□□□□□ -0.16
CLN6-216ENST00000636876 H7C1C5 153 aa14.08□□□□□ -0.16
CLN6-216ENST00000636876 CASQ2O14958 399 aaPredicted RBP14.08□□□□□ -0.16
CLN6-216ENST00000636876 AHCYL1O43865 530 aa14.08□□□□□ -0.16
CLN6-216ENST00000636876 MGRN1O60291 552 aa14.08□□□□□ -0.16
CLN6-216ENST00000636876 LYZL6O75951 148 aa14.08□□□□□ -0.16
CLN6-216ENST00000636876 CLDN1O95832 211 aa14.08□□□□□ -0.16
CLN6-216ENST00000636876 NR2C1P13056 603 aa14.08□□□□□ -0.16
CLN6-216ENST00000636876 HIST1H1CP16403 213 aaKnown RBP14.08□□□□□ -0.16
CLN6-216ENST00000636876 NOS3P29474 1203 aa14.08□□□□□ -0.16
CLN6-216ENST00000636876 CCKARP32238 428 aa14.08□□□□□ -0.16
CLN6-216ENST00000636876 GRK5P34947 590 aa14.08□□□□□ -0.16
CLN6-216ENST00000636876 CDKN2AP42771 156 aaKnown RBP14.08□□□□□ -0.16
CLN6-216ENST00000636876 GIPRP48546 466 aa14.08□□□□□ -0.16
CLN6-216ENST00000636876 LCN6P62502 163 aa14.08□□□□□ -0.16
CLN6-216ENST00000636876 CDK5Q00535 292 aa14.08□□□□□ -0.16
CLN6-216ENST00000636876 MYBPC1Q00872 1141 aa14.08□□□□□ -0.16
CLN6-216ENST00000636876 CD47Q08722 323 aa14.08□□□□□ -0.16
CLN6-216ENST00000636876 ITGADQ13349 1161 aa14.08□□□□□ -0.16
CLN6-216ENST00000636876 GINS1Q14691 196 aa14.08□□□□□ -0.16
CLN6-216ENST00000636876 SLC35F1Q5T1Q4 408 aa14.08□□□□□ -0.16
CLN6-216ENST00000636876 SFRP5Q5T4F7 317 aa14.08□□□□□ -0.16
CLN6-216ENST00000636876 C9orf135Q5VTT2 229 aa14.08□□□□□ -0.16
CLN6-216ENST00000636876 SLC27A4Q6P1M0 643 aa14.08□□□□□ -0.16
CLN6-216ENST00000636876 LRFN4Q6PJG9 635 aa14.08□□□□□ -0.16
CLN6-216ENST00000636876 PTCHD4Q6ZW05 846 aa14.08□□□□□ -0.16
CLN6-216ENST00000636876 FNDC8Q8TC99 324 aa14.08□□□□□ -0.16
CLN6-216ENST00000636876 KISS1RQ969F8 398 aaPredicted RBP14.08□□□□□ -0.16
CLN6-216ENST00000636876 HDHD5Q9BXW7 423 aa14.08□□□□□ -0.16
CLN6-216ENST00000636876 GABARAPL3Q9BY60 117 aa14.08□□□□□ -0.16
CLN6-216ENST00000636876 SLC25A19Q9HC21 320 aa14.08□□□□□ -0.16
CLN6-216ENST00000636876 TAS2R16Q9NYV7 291 aa14.08□□□□□ -0.16
CLN6-216ENST00000636876 GPR52Q9Y2T5 361 aa14.08□□□□□ -0.16
CLN6-216ENST00000636876 ORC6Q9Y5N6 252 aa14.08□□□□□ -0.16
CLN6-216ENST00000636876 SLC22A23A1A5C7 686 aa14.07□□□□□ -0.16
CLN6-216ENST00000636876 DHHO43323 396 aa14.07□□□□□ -0.16
CLN6-216ENST00000636876 QDPRP09417 244 aa14.07□□□□□ -0.16
CLN6-216ENST00000636876 PEX2P28328 305 aa14.07□□□□□ -0.16
CLN6-216ENST00000636876 UGT2B10P36537 528 aa14.07□□□□□ -0.16
CLN6-216ENST00000636876 ZNF133P52736 654 aaPredicted RBP14.07□□□□□ -0.16
CLN6-216ENST00000636876 RAD23AP54725 363 aa14.07□□□□□ -0.16
CLN6-216ENST00000636876 SH3BGRP55822 239 aaPredicted RBP14.07□□□□□ -0.16
CLN6-216ENST00000636876 SORDQ00796 357 aa14.07□□□□□ -0.16
CLN6-216ENST00000636876 TGFBR3Q03167 851 aa14.07□□□□□ -0.16
CLN6-216ENST00000636876 SLC34A1Q06495 639 aa14.07□□□□□ -0.16
CLN6-216ENST00000636876 RIPK1Q13546 671 aa14.07□□□□□ -0.16
CLN6-216ENST00000636876 TSC22D1Q15714 1073 aa14.07□□□□□ -0.16
CLN6-216ENST00000636876 STK11Q15831 433 aa14.07□□□□□ -0.16
CLN6-216ENST00000636876 CEACAM16Q2WEN9 425 aa14.07□□□□□ -0.16
CLN6-216ENST00000636876 LPCAT4Q643R3 524 aa14.07□□□□□ -0.16
CLN6-216ENST00000636876 ACSM5Q6NUN0 579 aa14.07□□□□□ -0.16
CLN6-216ENST00000636876 BHLHA15Q7RTS1 189 aaPredicted RBP14.07□□□□□ -0.16
CLN6-216ENST00000636876 JAZF1Q86VZ6 243 aa14.07□□□□□ -0.16
CLN6-216ENST00000636876 STEAP2Q8NFT2 490 aa14.07□□□□□ -0.16
CLN6-216ENST00000636876 OR4K13Q8NH42 304 aa14.07□□□□□ -0.16
CLN6-216ENST00000636876 MCHR2Q969V1 340 aa14.07□□□□□ -0.16
CLN6-216ENST00000636876 ZNF837Q96EG3 531 aaPredicted RBP14.07□□□□□ -0.16
CLN6-216ENST00000636876 RBP7Q96R05 134 aa14.07□□□□□ -0.16
CLN6-216ENST00000636876 SNX18Q96RF0 628 aa14.07□□□□□ -0.16
CLN6-216ENST00000636876 VSX1Q9NZR4 365 aaPredicted RBP14.07□□□□□ -0.16
CLN6-216ENST00000636876 UNC79Q9P2D8 2635 aa14.07□□□□□ -0.16
CLN6-216ENST00000636876 CIB4A0PJX0 185 aa14.06□□□□□ -0.16
CLN6-216ENST00000636876 A1L4Q6 167 aa14.06□□□□□ -0.16
CLN6-216ENST00000636876 PRSS44E7EML9 344 aa14.06□□□□□ -0.16
CLN6-216ENST00000636876 C19orf84I3L1E1 186 aa14.06□□□□□ -0.16
CLN6-216ENST00000636876 SLC2A10O95528 541 aa14.06□□□□□ -0.16
CLN6-216ENST00000636876 CDH2P19022 906 aaPredicted RBP14.06□□□□□ -0.16
CLN6-216ENST00000636876 IL32P24001 234 aa14.06□□□□□ -0.16
CLN6-216ENST00000636876 EPHA2P29317 976 aa14.06□□□□□ -0.16
CLN6-216ENST00000636876 ARF1P84077 181 aaKnown RBP14.06□□□□□ -0.16
CLN6-216ENST00000636876 FMODQ06828 376 aa14.06□□□□□ -0.16
CLN6-216ENST00000636876 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.06□□□□□ -0.16
CLN6-216ENST00000636876 NPRL3Q12980 569 aa14.06□□□□□ -0.16
CLN6-216ENST00000636876 PTGES3Q15185 160 aaKnown RBP14.06□□□□□ -0.16
CLN6-216ENST00000636876 LRRC36Q1X8D7 754 aa14.06□□□□□ -0.16
CLN6-216ENST00000636876 ZNF362Q5T0B9 420 aaPredicted RBP14.06□□□□□ -0.16
CLN6-216ENST00000636876 THEM4Q5T1C6 240 aa14.06□□□□□ -0.16
CLN6-216ENST00000636876 C10orf128Q5T292 105 aa14.06□□□□□ -0.16
CLN6-216ENST00000636876 OGFRL1Q5TC84 451 aaPredicted RBP14.06□□□□□ -0.16
CLN6-216ENST00000636876 TMEM236Q5W0B7 351 aa14.06□□□□□ -0.16
CLN6-216ENST00000636876 LEG1Q6P5S2 330 aa14.06□□□□□ -0.16
CLN6-216ENST00000636876 SLC25A47Q6Q0C1 308 aa14.06□□□□□ -0.16
CLN6-216ENST00000636876 C1orf162Q8NEQ5 155 aaPredicted RBP14.06□□□□□ -0.16
CLN6-216ENST00000636876 SDR9C7Q8NEX9 313 aa14.06□□□□□ -0.16
CLN6-216ENST00000636876 OR52E2Q8NGJ4 325 aa14.06□□□□□ -0.16
CLN6-216ENST00000636876 NMNAT3Q96T66 252 aa14.06□□□□□ -0.16
CLN6-216ENST00000636876 OR10A4Q9H209 315 aa14.06□□□□□ -0.16
CLN6-216ENST00000636876 RIBC2Q9H4K1 309 aa14.06□□□□□ -0.16
CLN6-216ENST00000636876 C8orf4Q9NR00 106 aa14.06□□□□□ -0.16
CLN6-216ENST00000636876 CMC2Q9NRP2 79 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms