RNA–Protein interactions for RNA: ENST00000635997.1

NEDD4L-238, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, human

TSL 5 BASIC

Gene NEDD4L, Length 4,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEDD4L-238	ENST00000635997	LRRTM2	O43300	516 aa		13.08	□□□□□ -0.32
NEDD4L-238	ENST00000635997	RPS25	P62851	125 aa	Known RBP	13.08	□□□□□ -0.32
NEDD4L-238	ENST00000635997	PCGF3	Q3KNV8	242 aa		13.08	□□□□□ -0.32
NEDD4L-238	ENST00000635997	TRAPPC6B	Q86SZ2	158 aa		13.08	□□□□□ -0.32
NEDD4L-238	ENST00000635997	PAPOLG	Q9BWT3	736 aa	Known RBP	13.08	□□□□□ -0.32
NEDD4L-238	ENST00000635997	OBP2B	Q9NPH6	170 aa		13.08	□□□□□ -0.32
NEDD4L-238	ENST00000635997	PLEKHJ1	Q9NW61	149 aa		13.08	□□□□□ -0.32
NEDD4L-238	ENST00000635997	COPZ2	Q9P299	210 aa		13.08	□□□□□ -0.32
NEDD4L-238	ENST00000635997	KCNIP3	Q9Y2W7	256 aa		13.08	□□□□□ -0.32
NEDD4L-238	ENST00000635997	PLSCR5	A0PG75	271 aa		13.08	□□□□□ -0.32
NEDD4L-238	ENST00000635997	SLC43A1	O75387	559 aa		13.08	□□□□□ -0.32
NEDD4L-238	ENST00000635997	SNRPB	P14678	240 aa	Known RBP	13.08	□□□□□ -0.32
NEDD4L-238	ENST00000635997	ARSB	P15848	533 aa		13.08	□□□□□ -0.32
NEDD4L-238	ENST00000635997	SLC35A1	P78382	337 aa		13.08	□□□□□ -0.32
NEDD4L-238	ENST00000635997	DEFA5	Q01523	94 aa		13.08	□□□□□ -0.32
NEDD4L-238	ENST00000635997	ARHGAP11B	Q3KRB8	267 aa		13.08	□□□□□ -0.32
NEDD4L-238	ENST00000635997	XKRX	Q6PP77	449 aa		13.08	□□□□□ -0.32
NEDD4L-238	ENST00000635997	OR10A2	Q9H208	303 aa		13.08	□□□□□ -0.32
NEDD4L-238	ENST00000635997	SLC6A15	Q9H2J7	730 aa		13.08	□□□□□ -0.32
NEDD4L-238	ENST00000635997	HINT3	Q9NQE9	182 aa	Known RBP	13.08	□□□□□ -0.32
NEDD4L-238	ENST00000635997	NDRG3	Q9UGV2	375 aa		13.08	□□□□□ -0.32
NEDD4L-238	ENST00000635997	HIF3A	Q9Y2N7	669 aa		13.08	□□□□□ -0.32
NEDD4L-238	ENST00000635997		V9GY05	133 aa		13.08	□□□□□ -0.32
NEDD4L-238	ENST00000635997	SLC33A1	O00400	549 aa	Predicted RBP	13.07	□□□□□ -0.32
NEDD4L-238	ENST00000635997	HSPB6	O14558	160 aa		13.07	□□□□□ -0.32
NEDD4L-238	ENST00000635997	ABHD16A	O95870	558 aa		13.07	□□□□□ -0.32
NEDD4L-238	ENST00000635997	IGHA2	P01877	340 aa		13.07	□□□□□ -0.32
NEDD4L-238	ENST00000635997	ENPP1	P22413	925 aa		13.07	□□□□□ -0.32
NEDD4L-238	ENST00000635997	FPR3	P25089	353 aa		13.07	□□□□□ -0.32
NEDD4L-238	ENST00000635997	ZNF81	P51508	661 aa		13.07	□□□□□ -0.32
NEDD4L-238	ENST00000635997	RBM39	Q14498	530 aa	Known RBP	13.07	□□□□□ -0.32
NEDD4L-238	ENST00000635997	SIMC1	Q8NDZ2	872 aa		13.07	□□□□□ -0.32
NEDD4L-238	ENST00000635997	OR5D14	Q8NGL3	314 aa		13.07	□□□□□ -0.32
NEDD4L-238	ENST00000635997	ABHD5	Q8WTS1	349 aa		13.07	□□□□□ -0.32
NEDD4L-238	ENST00000635997	MIB2	Q96AX9	1013 aa		13.07	□□□□□ -0.32
NEDD4L-238	ENST00000635997	COX14	Q96I36	57 aa		13.07	□□□□□ -0.32
NEDD4L-238	ENST00000635997	PIGQ	Q9BRB3	760 aa		13.07	□□□□□ -0.32
NEDD4L-238	ENST00000635997	NUDT9	Q9BW91	350 aa		13.07	□□□□□ -0.32
NEDD4L-238	ENST00000635997	ACTR6	Q9GZN1	396 aa		13.07	□□□□□ -0.32
NEDD4L-238	ENST00000635997	OR14J1	Q9UGF5	321 aa		13.07	□□□□□ -0.32
NEDD4L-238	ENST00000635997	PSORS1C1	Q9UIG5	152 aa		13.07	□□□□□ -0.32
NEDD4L-238	ENST00000635997	MYO18B	Q8IUG5	2567 aa		13.07	□□□□□ -0.32
NEDD4L-238	ENST00000635997	GABRP	O00591	440 aa		13.07	□□□□□ -0.32
NEDD4L-238	ENST00000635997	IRF2	P14316	349 aa		13.07	□□□□□ -0.32
NEDD4L-238	ENST00000635997	RAB3A	P20336	220 aa		13.07	□□□□□ -0.32
NEDD4L-238	ENST00000635997	ERP29	P30040	261 aa	Known RBP	13.07	□□□□□ -0.32
NEDD4L-238	ENST00000635997	RPL35	P42766	123 aa	Known RBP	13.07	□□□□□ -0.32
NEDD4L-238	ENST00000635997	AGER	Q15109	404 aa		13.07	□□□□□ -0.32
NEDD4L-238	ENST00000635997	KDM4D	Q6B0I6	523 aa		13.07	□□□□□ -0.32
NEDD4L-238	ENST00000635997	SLC38A1	Q9H2H9	487 aa		13.07	□□□□□ -0.32
NEDD4L-238	ENST00000635997	APMAP	Q9HDC9	416 aa		13.07	□□□□□ -0.32
NEDD4L-238	ENST00000635997	FBXO34	Q9NWN3	711 aa		13.07	□□□□□ -0.32
NEDD4L-238	ENST00000635997	ASB4	Q9Y574	426 aa		13.07	□□□□□ -0.32
NEDD4L-238	ENST00000635997	GOLGB1	Q14789	3259 aa	Known RBP	13.07	□□□□□ -0.32
NEDD4L-238	ENST00000635997	CXCL13	O43927	109 aa		13.07	□□□□□ -0.32
NEDD4L-238	ENST00000635997	OR7C1	O76099	320 aa	Predicted RBP	13.07	□□□□□ -0.32
NEDD4L-238	ENST00000635997	TP53	P04637	393 aa	Predicted RBP	13.07	□□□□□ -0.32
NEDD4L-238	ENST00000635997	P2RX1	P51575	399 aa		13.07	□□□□□ -0.32
NEDD4L-238	ENST00000635997	MLC1	Q15049	377 aa		13.07	□□□□□ -0.32
NEDD4L-238	ENST00000635997	SIGIRR	Q6IA17	410 aa		13.07	□□□□□ -0.32
NEDD4L-238	ENST00000635997	MOB3C	Q70IA8	216 aa		13.07	□□□□□ -0.32
NEDD4L-238	ENST00000635997	NRARP	Q7Z6K4	114 aa		13.07	□□□□□ -0.32
NEDD4L-238	ENST00000635997	ACBD4	Q8NC06	268 aa		13.07	□□□□□ -0.32
NEDD4L-238	ENST00000635997	DNAAF1	Q8NEP3	725 aa		13.07	□□□□□ -0.32
NEDD4L-238	ENST00000635997	SAP25	Q8TEE9	199 aa		13.07	□□□□□ -0.32
NEDD4L-238	ENST00000635997	ZNF350	Q9GZX5	532 aa		13.07	□□□□□ -0.32
NEDD4L-238	ENST00000635997	CLEC2L	P0C7M8	214 aa		13.06	□□□□□ -0.32
NEDD4L-238	ENST00000635997	EMD	P50402	254 aa		13.06	□□□□□ -0.32
NEDD4L-238	ENST00000635997	NKG7	Q16617	165 aa		13.06	□□□□□ -0.32
NEDD4L-238	ENST00000635997	CD163	Q86VB7	1156 aa		13.06	□□□□□ -0.32
NEDD4L-238	ENST00000635997	MVB12A	Q96EY5	273 aa		13.06	□□□□□ -0.32
NEDD4L-238	ENST00000635997	C7orf34	Q96L11	122 aa		13.06	□□□□□ -0.32
NEDD4L-238	ENST00000635997	OR14A2	Q96R54	314 aa		13.06	□□□□□ -0.32
NEDD4L-238	ENST00000635997	DOCK6	Q96HP0	2047 aa		13.06	□□□□□ -0.32
NEDD4L-238	ENST00000635997	MDC1	Q14676	2089 aa	Known RBP	13.06	□□□□□ -0.32
NEDD4L-238	ENST00000635997	P2RY10	O00398	339 aa		13.06	□□□□□ -0.32
NEDD4L-238	ENST00000635997	SCO1	O75880	301 aa		13.06	□□□□□ -0.32
NEDD4L-238	ENST00000635997	IFNA7	P01567	189 aa		13.06	□□□□□ -0.32
NEDD4L-238	ENST00000635997	RBM34	P42696	430 aa	Known RBP	13.06	□□□□□ -0.32
NEDD4L-238	ENST00000635997	MFAP5	Q13361	173 aa		13.06	□□□□□ -0.32
NEDD4L-238	ENST00000635997	CDK10	Q15131	360 aa		13.06	□□□□□ -0.32
NEDD4L-238	ENST00000635997	ZMYND11	Q15326	602 aa		13.06	□□□□□ -0.32
NEDD4L-238	ENST00000635997	H1FNT	Q75WM6	255 aa	Predicted RBP	13.06	□□□□□ -0.32
NEDD4L-238	ENST00000635997	MISP	Q8IVT2	679 aa		13.06	□□□□□ -0.32
NEDD4L-238	ENST00000635997	TXNDC15	Q96J42	360 aa		13.06	□□□□□ -0.32
NEDD4L-238	ENST00000635997	RHNO1	Q9BSD3	238 aa		13.06	□□□□□ -0.32
NEDD4L-238	ENST00000635997	DPCD	Q9BVM2	203 aa	Predicted RBP	13.06	□□□□□ -0.32
NEDD4L-238	ENST00000635997	GPR87	Q9BY21	358 aa		13.06	□□□□□ -0.32
NEDD4L-238	ENST00000635997		A0A0A6YYD5	115 aa		13.06	□□□□□ -0.32
NEDD4L-238	ENST00000635997	MEIOC	A2RUB1	952 aa		13.06	□□□□□ -0.32
NEDD4L-238	ENST00000635997	ASPDH	A6ND91	283 aa		13.06	□□□□□ -0.32
NEDD4L-238	ENST00000635997	METTL15	A6NJ78	407 aa		13.06	□□□□□ -0.32
NEDD4L-238	ENST00000635997	DVL2	O14641	736 aa		13.06	□□□□□ -0.32
NEDD4L-238	ENST00000635997	GP1BA	P07359	652 aa		13.06	□□□□□ -0.32
NEDD4L-238	ENST00000635997	H2AFB2	P0C5Z0	115 aa		13.06	□□□□□ -0.32
NEDD4L-238	ENST00000635997	PPIA	P62937	165 aa	Known RBP	13.06	□□□□□ -0.32
NEDD4L-238	ENST00000635997	PLCXD3	Q63HM9	321 aa		13.06	□□□□□ -0.32
NEDD4L-238	ENST00000635997	KIRREL2	Q6UWL6	708 aa		13.06	□□□□□ -0.32
NEDD4L-238	ENST00000635997	BEST4	Q8NFU0	473 aa		13.06	□□□□□ -0.32
NEDD4L-238	ENST00000635997	MED18	Q9BUE0	208 aa		13.06	□□□□□ -0.32

Retrieved 100 of 20,778 RNA–protein pairs in 29 ms