RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 CDH24Q86UP0 819 aa12.95□□□□□ -0.34
PNKP-221ENST00000627317 WDFY1Q8IWB7 410 aa12.95□□□□□ -0.34
PNKP-221ENST00000627317 ARIH2OSQ8N7S6 290 aa12.95□□□□□ -0.34
PNKP-221ENST00000627317 SYT14Q8NB59 555 aa12.95□□□□□ -0.34
PNKP-221ENST00000627317 ZNF519Q8TB69 540 aa12.95□□□□□ -0.34
PNKP-221ENST00000627317 MAGEE2Q8TD90 523 aaPredicted RBP12.95□□□□□ -0.34
PNKP-221ENST00000627317 RASD2Q96D21 266 aa12.95□□□□□ -0.34
PNKP-221ENST00000627317 ERMAPQ96PL5 475 aaPredicted RBP12.95□□□□□ -0.34
PNKP-221ENST00000627317 ALG12Q9BV10 488 aa12.95□□□□□ -0.34
PNKP-221ENST00000627317 TSSK6Q9BXA6 273 aa12.95□□□□□ -0.34
PNKP-221ENST00000627317 NRIP3Q9NQ35 241 aa12.95□□□□□ -0.34
PNKP-221ENST00000627317 KRT84Q9NSB2 600 aa12.95□□□□□ -0.34
PNKP-221ENST00000627317 IL20Q9NYY1 176 aa12.95□□□□□ -0.34
PNKP-221ENST00000627317 GPR52Q9Y2T5 361 aa12.95□□□□□ -0.34
PNKP-221ENST00000627317 A6NNC1 897 aa12.94□□□□□ -0.34
PNKP-221ENST00000627317 SOCS2O14508 198 aa12.94□□□□□ -0.34
PNKP-221ENST00000627317 ARHGEF9O43307 516 aa12.94□□□□□ -0.34
PNKP-221ENST00000627317 ITGA5P08648 1049 aa12.94□□□□□ -0.34
PNKP-221ENST00000627317 IGFBP1P08833 259 aaPredicted RBP12.94□□□□□ -0.34
PNKP-221ENST00000627317 OSMP13725 252 aa12.94□□□□□ -0.34
PNKP-221ENST00000627317 CDH2P19022 906 aaPredicted RBP12.94□□□□□ -0.34
PNKP-221ENST00000627317 IGFBP5P24593 272 aa12.94□□□□□ -0.34
PNKP-221ENST00000627317 POU1F1P28069 291 aa12.94□□□□□ -0.34
PNKP-221ENST00000627317 DAPP51397 102 aa12.94□□□□□ -0.34
PNKP-221ENST00000627317 SH3BGRP55822 239 aaPredicted RBP12.94□□□□□ -0.34
PNKP-221ENST00000627317 RUNX1T1Q06455 604 aa12.94□□□□□ -0.34
PNKP-221ENST00000627317 TESK1Q15569 626 aa12.94□□□□□ -0.34
PNKP-221ENST00000627317 SLC36A3Q495N2 470 aa12.94□□□□□ -0.34
PNKP-221ENST00000627317 SFRP5Q5T4F7 317 aa12.94□□□□□ -0.34
PNKP-221ENST00000627317 ANKRD34AQ69YU3 496 aa12.94□□□□□ -0.34
PNKP-221ENST00000627317 BHLHA15Q7RTS1 189 aaPredicted RBP12.94□□□□□ -0.34
PNKP-221ENST00000627317 FAM122BQ7Z309 247 aa12.94□□□□□ -0.34
PNKP-221ENST00000627317 ADCK1Q86TW2 530 aa12.94□□□□□ -0.34
PNKP-221ENST00000627317 ZNF433Q8N7K0 673 aaPredicted RBP12.94□□□□□ -0.34
PNKP-221ENST00000627317 STEAP2Q8NFT2 490 aa12.94□□□□□ -0.34
PNKP-221ENST00000627317 OR2T33Q8NG76 320 aa12.94□□□□□ -0.34
PNKP-221ENST00000627317 OR8D4Q8NGM9 314 aa12.94□□□□□ -0.34
PNKP-221ENST00000627317 HDAC2Q92769 488 aaKnown RBP12.94□□□□□ -0.34
PNKP-221ENST00000627317 TMEM54Q969K7 222 aa12.94□□□□□ -0.34
PNKP-221ENST00000627317 CIB1Q99828 191 aa12.94□□□□□ -0.34
PNKP-221ENST00000627317 HDHD5Q9BXW7 423 aa12.94□□□□□ -0.34
PNKP-221ENST00000627317 PLA2G12AQ9BZM1 189 aa12.94□□□□□ -0.34
PNKP-221ENST00000627317 SMURF2Q9HAU4 748 aa12.94□□□□□ -0.34
PNKP-221ENST00000627317 CRLF2Q9HC73 371 aa12.94□□□□□ -0.34
PNKP-221ENST00000627317 GPR35Q9HC97 309 aa12.94□□□□□ -0.34
PNKP-221ENST00000627317 RASSF1Q9NS23 344 aa12.94□□□□□ -0.34
PNKP-221ENST00000627317 GLTPQ9NZD2 209 aa12.94□□□□□ -0.34
PNKP-221ENST00000627317 TUBAL3A6NHL2 446 aa12.93□□□□□ -0.34
PNKP-221ENST00000627317 H7C1C5 153 aa12.93□□□□□ -0.34
PNKP-221ENST00000627317 PDLIM1O00151 329 aa12.93□□□□□ -0.34
PNKP-221ENST00000627317 IMPA2O14732 288 aa12.93□□□□□ -0.34
PNKP-221ENST00000627317 ARPC3O15145 178 aa12.93□□□□□ -0.34
PNKP-221ENST00000627317 IDH3BO43837 385 aa12.93□□□□□ -0.34
PNKP-221ENST00000627317 RAD51DO75771 328 aa12.93□□□□□ -0.34
PNKP-221ENST00000627317 ANPEPP15144 967 aa12.93□□□□□ -0.34
PNKP-221ENST00000627317 HOXC12P31275 282 aa12.93□□□□□ -0.34
PNKP-221ENST00000627317 FOXG1P55316 489 aaPredicted RBP12.93□□□□□ -0.34
PNKP-221ENST00000627317 LCN6P62502 163 aa12.93□□□□□ -0.34
PNKP-221ENST00000627317 TSC22D1Q15714 1073 aa12.93□□□□□ -0.34
PNKP-221ENST00000627317 CEACAM16Q2WEN9 425 aa12.93□□□□□ -0.34
PNKP-221ENST00000627317 MESTQ5EB52 335 aa12.93□□□□□ -0.34
PNKP-221ENST00000627317 PHYHD1Q5SRE7 291 aa12.93□□□□□ -0.34
PNKP-221ENST00000627317 LINGO2Q7L985 606 aa12.93□□□□□ -0.34
PNKP-221ENST00000627317 TMEM200AQ86VY9 491 aa12.93□□□□□ -0.34
PNKP-221ENST00000627317 JAZF1Q86VZ6 243 aa12.93□□□□□ -0.34
PNKP-221ENST00000627317 LINC01560Q8TB33 94 aa12.93□□□□□ -0.34
PNKP-221ENST00000627317 KCNK17Q96T54 332 aa12.93□□□□□ -0.34
PNKP-221ENST00000627317 RBM4BQ9BQ04 359 aaKnown RBP12.93□□□□□ -0.34
PNKP-221ENST00000627317 MED18Q9BUE0 208 aa12.93□□□□□ -0.34
PNKP-221ENST00000627317 C9orf16Q9BUW7 83 aa12.93□□□□□ -0.34
PNKP-221ENST00000627317 RBM4Q9BWF3 364 aaKnown RBP12.93□□□□□ -0.34
PNKP-221ENST00000627317 OSBPL10Q9BXB5 764 aa12.93□□□□□ -0.34
PNKP-221ENST00000627317 MRPL13Q9BYD1 178 aaKnown RBP12.93□□□□□ -0.34
PNKP-221ENST00000627317 ACTR6Q9GZN1 396 aa12.93□□□□□ -0.34
PNKP-221ENST00000627317 REV1Q9UBZ9 1251 aa12.93□□□□□ -0.34
PNKP-221ENST00000627317 ENOPH1Q9UHY7 261 aa12.93□□□□□ -0.34
PNKP-221ENST00000627317 BAIAP2Q9UQB8 552 aa12.93□□□□□ -0.34
PNKP-221ENST00000627317 ORC6Q9Y5N6 252 aa12.93□□□□□ -0.34
PNKP-221ENST00000627317 TEP1Q99973 2627 aaKnown RBP12.92□□□□□ -0.34
PNKP-221ENST00000627317 RPL36A-HNRNPH2H7BZ11 118 aa12.92□□□□□ -0.34
PNKP-221ENST00000627317 BHLHE40O14503 412 aa12.92□□□□□ -0.34
PNKP-221ENST00000627317 TXNDC12O95881 172 aa12.92□□□□□ -0.34
PNKP-221ENST00000627317 TP53P04637 393 aaPredicted RBP12.92□□□□□ -0.34
PNKP-221ENST00000627317 QDPRP09417 244 aa12.92□□□□□ -0.34
PNKP-221ENST00000627317 EPXP11678 715 aa12.92□□□□□ -0.34
PNKP-221ENST00000627317 ZNF84P51523 738 aa12.92□□□□□ -0.34
PNKP-221ENST00000627317 MYBPC1Q00872 1141 aa12.92□□□□□ -0.34
PNKP-221ENST00000627317 STK11Q15831 433 aa12.92□□□□□ -0.34
PNKP-221ENST00000627317 PGGHGQ32M88 737 aa12.92□□□□□ -0.34
PNKP-221ENST00000627317 KDM4DQ6B0I6 523 aa12.92□□□□□ -0.34
PNKP-221ENST00000627317 OR7E24Q6IFN5 339 aa12.92□□□□□ -0.34
PNKP-221ENST00000627317 PARP8Q8N3A8 854 aa12.92□□□□□ -0.34
PNKP-221ENST00000627317 IQCF1Q8N6M8 205 aa12.92□□□□□ -0.34
PNKP-221ENST00000627317 C1orf162Q8NEQ5 155 aaPredicted RBP12.92□□□□□ -0.34
PNKP-221ENST00000627317 FNDC8Q8TC99 324 aa12.92□□□□□ -0.34
PNKP-221ENST00000627317 NRGNQ92686 78 aa12.92□□□□□ -0.34
PNKP-221ENST00000627317 EME1Q96AY2 570 aa12.92□□□□□ -0.34
PNKP-221ENST00000627317 S100PBPQ96BU1 408 aa12.92□□□□□ -0.34
PNKP-221ENST00000627317 DACH2Q96NX9 599 aa12.92□□□□□ -0.34
PNKP-221ENST00000627317 RBP7Q96R05 134 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms