RNA–Protein interactions for RNA: ENST00000625299.1

PNKP-218, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 428 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-218ENST00000625299 POM121CA8CG34 1229 aa12.45□□□□□ -0.42
PNKP-218ENST00000625299 FOXH1O75593 365 aa12.45□□□□□ -0.42
PNKP-218ENST00000625299 FARS2O95363 451 aaKnown RBP12.45□□□□□ -0.42
PNKP-218ENST00000625299 ADORA3P0DMS8 318 aa12.45□□□□□ -0.42
PNKP-218ENST00000625299 MDKP21741 143 aaPredicted RBP12.45□□□□□ -0.42
PNKP-218ENST00000625299 BGNP21810 368 aa12.45□□□□□ -0.42
PNKP-218ENST00000625299 CCNOP22674 350 aa12.45□□□□□ -0.42
PNKP-218ENST00000625299 UCP2P55851 309 aa12.45□□□□□ -0.42
PNKP-218ENST00000625299 HNRNPA0Q13151 305 aaKnown RBP12.45□□□□□ -0.42
PNKP-218ENST00000625299 MOGQ16653 247 aa12.45□□□□□ -0.42
PNKP-218ENST00000625299 C6orf10Q5SRN2 563 aa12.45□□□□□ -0.42
PNKP-218ENST00000625299 LEG1Q6P5S2 330 aa12.45□□□□□ -0.42
PNKP-218ENST00000625299 ULK3Q6PHR2 472 aa12.45□□□□□ -0.42
PNKP-218ENST00000625299 WDR88Q6ZMY6 472 aa12.45□□□□□ -0.42
PNKP-218ENST00000625299 PXKQ7Z7A4 578 aa12.45□□□□□ -0.42
PNKP-218ENST00000625299 COMTD1Q86VU5 262 aa12.45□□□□□ -0.42
PNKP-218ENST00000625299 LSMEM1Q8N8F7 131 aa12.45□□□□□ -0.42
PNKP-218ENST00000625299 GLB1L3Q8NCI6 653 aaPredicted RBP12.45□□□□□ -0.42
PNKP-218ENST00000625299 DEFB108BQ8NET1 73 aa12.45□□□□□ -0.42
PNKP-218ENST00000625299 OR4K5Q8NGD3 323 aa12.45□□□□□ -0.42
PNKP-218ENST00000625299 OR1J1Q8NGS3 322 aa12.45□□□□□ -0.42
PNKP-218ENST00000625299 BBS10Q8TAM1 723 aa12.45□□□□□ -0.42
PNKP-218ENST00000625299 POP5Q969H6 163 aaKnown RBP12.45□□□□□ -0.42
PNKP-218ENST00000625299 SLC47A1Q96FL8 570 aa12.45□□□□□ -0.42
PNKP-218ENST00000625299 ZNF48Q96MX3 618 aaPredicted RBP12.45□□□□□ -0.42
PNKP-218ENST00000625299 GPA33Q99795 319 aa12.45□□□□□ -0.42
PNKP-218ENST00000625299 BCL2L14Q9BZR8 327 aa12.45□□□□□ -0.42
PNKP-218ENST00000625299 MMP26Q9NRE1 261 aa12.45□□□□□ -0.42
PNKP-218ENST00000625299 TMEM38BQ9NVV0 291 aa12.45□□□□□ -0.42
PNKP-218ENST00000625299 THUMPD1Q9NXG2 353 aaKnown RBP12.45□□□□□ -0.42
PNKP-218ENST00000625299 MRPL39Q9NYK5 338 aaKnown RBP12.45□□□□□ -0.42
PNKP-218ENST00000625299 GLTPQ9NZD2 209 aa12.45□□□□□ -0.42
PNKP-218ENST00000625299 LEF1Q9UJU2 399 aaPredicted RBP12.45□□□□□ -0.42
PNKP-218ENST00000625299 AUP1Q9Y679 476 aa12.45□□□□□ -0.42
PNKP-218ENST00000625299 IQCMA0A1B0GVH7 501 aa12.44□□□□□ -0.42
PNKP-218ENST00000625299 PLPP3O14495 311 aa12.44□□□□□ -0.42
PNKP-218ENST00000625299 SDHDO14521 159 aa12.44□□□□□ -0.42
PNKP-218ENST00000625299 ENTPD5O75356 428 aa12.44□□□□□ -0.42
PNKP-218ENST00000625299 OR6A2O95222 327 aa12.44□□□□□ -0.42
PNKP-218ENST00000625299 IGHV1-46P01743 117 aa12.44□□□□□ -0.42
PNKP-218ENST00000625299 IL6P05231 212 aa12.44□□□□□ -0.42
PNKP-218ENST00000625299 RNASE1P07998 156 aaKnown RBP12.44□□□□□ -0.42
PNKP-218ENST00000625299 PCGF2P35227 344 aa12.44□□□□□ -0.42
PNKP-218ENST00000625299 MELKQ14680 651 aa12.44□□□□□ -0.42
PNKP-218ENST00000625299 SLC36A2Q495M3 483 aa12.44□□□□□ -0.42
PNKP-218ENST00000625299 CEP85LQ5SZL2 805 aa12.44□□□□□ -0.42
PNKP-218ENST00000625299 SPATA46Q5T0L3 261 aa12.44□□□□□ -0.42
PNKP-218ENST00000625299 NHLRC1Q6VVB1 395 aa12.44□□□□□ -0.42
PNKP-218ENST00000625299 SLC16A14Q7RTX9 510 aa12.44□□□□□ -0.42
PNKP-218ENST00000625299 OR1J2Q8NGS2 313 aa12.44□□□□□ -0.42
PNKP-218ENST00000625299 TMEM54Q969K7 222 aa12.44□□□□□ -0.42
PNKP-218ENST00000625299 TRIM44Q96DX7 344 aaPredicted RBP12.44□□□□□ -0.42
PNKP-218ENST00000625299 LRMDAQ9H2I8 198 aa12.44□□□□□ -0.42
PNKP-218ENST00000625299 C1orf198Q9H425 327 aa12.44□□□□□ -0.42
PNKP-218ENST00000625299 WDR55Q9H6Y2 383 aaPredicted RBP12.44□□□□□ -0.42
PNKP-218ENST00000625299 RMND5AQ9H871 391 aa12.44□□□□□ -0.42
PNKP-218ENST00000625299 TMEM27Q9HBJ8 222 aa12.44□□□□□ -0.42
PNKP-218ENST00000625299 A4GALTQ9NPC4 353 aa12.44□□□□□ -0.42
PNKP-218ENST00000625299 PLEK2Q9NYT0 353 aa12.44□□□□□ -0.42
PNKP-218ENST00000625299 PURGQ9UJV8 347 aaKnown RBP12.44□□□□□ -0.42
PNKP-218ENST00000625299 NOTCH1P46531 2555 aa12.44□□□□□ -0.42
PNKP-218ENST00000625299 TANC2Q9HCD6 1990 aa12.43□□□□□ -0.42
PNKP-218ENST00000625299 IGHV3OR16-10A0A075B7F0 116 aa12.43□□□□□ -0.42
PNKP-218ENST00000625299 PLSCR5A0PG75 271 aa12.43□□□□□ -0.42
PNKP-218ENST00000625299 SLC22A3O75751 556 aa12.43□□□□□ -0.42
PNKP-218ENST00000625299 GPANK1O95872 356 aa12.43□□□□□ -0.42
PNKP-218ENST00000625299 ZCCHC18P0CG32 403 aa12.43□□□□□ -0.42
PNKP-218ENST00000625299 OMGP23515 440 aa12.43□□□□□ -0.42
PNKP-218ENST00000625299 EPHA3P29320 983 aa12.43□□□□□ -0.42
PNKP-218ENST00000625299 PRKAR1BP31321 381 aa12.43□□□□□ -0.42
PNKP-218ENST00000625299 PLP2Q04941 152 aa12.43□□□□□ -0.42
PNKP-218ENST00000625299 SLC3A1Q07837 685 aa12.43□□□□□ -0.42
PNKP-218ENST00000625299 KLF17Q5JT82 389 aaPredicted RBP12.43□□□□□ -0.42
PNKP-218ENST00000625299 FAM209AQ5JX71 171 aa12.43□□□□□ -0.42
PNKP-218ENST00000625299 FAM91A1Q658Y4 838 aa12.43□□□□□ -0.42
PNKP-218ENST00000625299 NXNQ6DKJ4 435 aa12.43□□□□□ -0.42
PNKP-218ENST00000625299 SLC35D2Q76EJ3 337 aa12.43□□□□□ -0.42
PNKP-218ENST00000625299 KIRREL3Q8IZU9 778 aa12.43□□□□□ -0.42
PNKP-218ENST00000625299 RBM15BQ8NDT2 890 aaKnown RBP12.43□□□□□ -0.42
PNKP-218ENST00000625299 OR5J2Q8NH18 312 aa12.43□□□□□ -0.42
PNKP-218ENST00000625299 OR6S1Q8NH40 331 aa12.43□□□□□ -0.42
PNKP-218ENST00000625299 GEMIN6Q8WXD5 167 aaKnown RBP12.43□□□□□ -0.42
PNKP-218ENST00000625299 ZNF566Q969W8 418 aa12.43□□□□□ -0.42
PNKP-218ENST00000625299 ITCHQ96J02 903 aa12.43□□□□□ -0.42
PNKP-218ENST00000625299 DCLRE1CQ96SD1 692 aaKnown RBP12.43□□□□□ -0.42
PNKP-218ENST00000625299 MRI1Q9BV20 369 aa12.43□□□□□ -0.42
PNKP-218ENST00000625299 RSPO3Q9BXY4 272 aaPredicted RBP12.43□□□□□ -0.42
PNKP-218ENST00000625299 MS4A7Q9GZW8 240 aaPredicted RBP12.43□□□□□ -0.42
PNKP-218ENST00000625299 SLITRK2Q9H156 845 aa12.43□□□□□ -0.42
PNKP-218ENST00000625299 BCL2L10Q9HD36 194 aa12.43□□□□□ -0.42
PNKP-218ENST00000625299 TESQ9UGI8 421 aaKnown RBP12.43□□□□□ -0.42
PNKP-218ENST00000625299 BIRC5O15392 142 aa12.42□□□□□ -0.42
PNKP-218ENST00000625299 DHHO43323 396 aa12.42□□□□□ -0.42
PNKP-218ENST00000625299 UBOX5O94941 541 aa12.42□□□□□ -0.42
PNKP-218ENST00000625299 SNAP29O95721 258 aa12.42□□□□□ -0.42
PNKP-218ENST00000625299 PTHP01270 115 aa12.42□□□□□ -0.42
PNKP-218ENST00000625299 IGHV3-13P01766 116 aa12.42□□□□□ -0.42
PNKP-218ENST00000625299 SBK2P0C263 348 aa12.42□□□□□ -0.42
PNKP-218ENST00000625299 GCH1P30793 250 aa12.42□□□□□ -0.42
PNKP-218ENST00000625299 APLNRP35414 380 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms