RNA–Protein interactions for RNA: ENST00000625286.1

DDX41-218, Transcript of DEAD-box helicase 41, humanhuman

TSL 5 BASIC

Gene DDX41, Length 150 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-218ENST00000625286 SHQ1Q6PI26 577 aaKnown RBP9.39□□□□□ -0.91
DDX41-218ENST00000625286 EPGNQ6UW88 154 aa9.39□□□□□ -0.91
DDX41-218ENST00000625286 SLC35D2Q76EJ3 337 aa9.39□□□□□ -0.91
DDX41-218ENST00000625286 CPEB3Q8NE35 698 aaKnown RBP9.39□□□□□ -0.91
DDX41-218ENST00000625286 SLC30A7Q8NEW0 376 aa9.39□□□□□ -0.91
DDX41-218ENST00000625286 BHLHE22Q8NFJ8 381 aaPredicted RBP9.39□□□□□ -0.91
DDX41-218ENST00000625286 GPR32P1Q8NGA4 272 aa9.39□□□□□ -0.91
DDX41-218ENST00000625286 OR5J2Q8NH18 312 aa9.39□□□□□ -0.91
DDX41-218ENST00000625286 OR6X1Q8NH79 312 aa9.39□□□□□ -0.91
DDX41-218ENST00000625286 C22orf15Q8WYQ4 148 aa9.39□□□□□ -0.91
DDX41-218ENST00000625286 TMEM43Q9BTV4 400 aa9.39□□□□□ -0.91
DDX41-218ENST00000625286 PARD6BQ9BYG5 372 aa9.39□□□□□ -0.91
DDX41-218ENST00000625286 B3GAT2Q9NPZ5 323 aa9.39□□□□□ -0.91
DDX41-218ENST00000625286 TCF7L2Q9NQB0 619 aa9.39□□□□□ -0.91
DDX41-218ENST00000625286 TESQ9UGI8 421 aaKnown RBP9.39□□□□□ -0.91
DDX41-218ENST00000625286 WIPI2Q9Y4P8 454 aa9.39□□□□□ -0.91
DDX41-218ENST00000625286 PCDHGB1Q9Y5G3 927 aa9.39□□□□□ -0.91
DDX41-218ENST00000625286 GMEB1Q9Y692 573 aa9.39□□□□□ -0.91
DDX41-218ENST00000625286 IGHV1-69-2A0A0G2JMI3 117 aa9.38□□□□□ -0.91
DDX41-218ENST00000625286 C5orf58C9J3I9 102 aa9.38□□□□□ -0.91
DDX41-218ENST00000625286 M0R3H8 397 aa9.38□□□□□ -0.91
DDX41-218ENST00000625286 TMPRSS2O15393 492 aa9.38□□□□□ -0.91
DDX41-218ENST00000625286 DHHO43323 396 aa9.38□□□□□ -0.91
DDX41-218ENST00000625286 CH25HO95992 272 aa9.38□□□□□ -0.91
DDX41-218ENST00000625286 MMP7P09237 267 aaPredicted RBP9.38□□□□□ -0.91
DDX41-218ENST00000625286 PGA4P0DJD7 388 aa9.38□□□□□ -0.91
DDX41-218ENST00000625286 PGA3P0DJD8 388 aa9.38□□□□□ -0.91
DDX41-218ENST00000625286 OR8G3PP0DMU2 310 aa9.38□□□□□ -0.91
DDX41-218ENST00000625286 GPX2P18283 190 aa9.38□□□□□ -0.91
DDX41-218ENST00000625286 MAKP20794 623 aa9.38□□□□□ -0.91
DDX41-218ENST00000625286 ZFP36P26651 326 aaKnown RBP9.38□□□□□ -0.91
DDX41-218ENST00000625286 MRPL19P49406 292 aaKnown RBP9.38□□□□□ -0.91
DDX41-218ENST00000625286 UCP2P55851 309 aa9.38□□□□□ -0.91
DDX41-218ENST00000625286 RGS8P57771 180 aaPredicted RBP9.38□□□□□ -0.91
DDX41-218ENST00000625286 GLO1Q04760 184 aa9.38□□□□□ -0.91
DDX41-218ENST00000625286 ZP4Q12836 540 aa9.38□□□□□ -0.91
DDX41-218ENST00000625286 ZNF74Q16587 644 aa9.38□□□□□ -0.91
DDX41-218ENST00000625286 HIST3H3Q16695 136 aa9.38□□□□□ -0.91
DDX41-218ENST00000625286 DUSP7Q16829 419 aa9.38□□□□□ -0.91
DDX41-218ENST00000625286 NKPD1Q17RQ9 610 aa9.38□□□□□ -0.91
DDX41-218ENST00000625286 REP15Q6BDI9 236 aa9.38□□□□□ -0.91
DDX41-218ENST00000625286 BLOC1S3Q6QNY0 202 aa9.38□□□□□ -0.91
DDX41-218ENST00000625286 USP51Q70EK9 711 aa9.38□□□□□ -0.91
DDX41-218ENST00000625286 ZNF771Q7L3S4 317 aaPredicted RBP9.38□□□□□ -0.91
DDX41-218ENST00000625286 PTOV1Q86YD1 416 aa9.38□□□□□ -0.91
DDX41-218ENST00000625286 C10orf53Q8N6V4 93 aa9.38□□□□□ -0.91
DDX41-218ENST00000625286 GOLGA6L1Q8N7Z2 621 aa9.38□□□□□ -0.91
DDX41-218ENST00000625286 SMYD1Q8NB12 490 aa9.38□□□□□ -0.91
DDX41-218ENST00000625286 OR4K5Q8NGD3 323 aa9.38□□□□□ -0.91
DDX41-218ENST00000625286 OR6T1Q8NGN1 323 aa9.38□□□□□ -0.91
DDX41-218ENST00000625286 ZNF519Q8TB69 540 aa9.38□□□□□ -0.91
DDX41-218ENST00000625286 SYNPRQ8TBG9 265 aa9.38□□□□□ -0.91
DDX41-218ENST00000625286 TAF15Q92804 592 aaKnown RBP eCLIP9.38□□□□□ -0.91
DDX41-218ENST00000625286 C1orf147Q96MC9 270 aaPredicted RBP9.38□□□□□ -0.91
DDX41-218ENST00000625286 EPYCQ99645 322 aa9.38□□□□□ -0.91
DDX41-218ENST00000625286 RBM4Q9BWF3 364 aaKnown RBP9.38□□□□□ -0.91
DDX41-218ENST00000625286 CACYBPQ9HB71 228 aaKnown RBP9.38□□□□□ -0.91
DDX41-218ENST00000625286 TMEM27Q9HBJ8 222 aa9.38□□□□□ -0.91
DDX41-218ENST00000625286 DCAF16Q9NXF7 216 aa9.38□□□□□ -0.91
DDX41-218ENST00000625286 NKIRAS2Q9NYR9 191 aa9.38□□□□□ -0.91
DDX41-218ENST00000625286 ZNF346Q9UL40 294 aaKnown RBP9.38□□□□□ -0.91
DDX41-218ENST00000625286 SNAP29O95721 258 aa9.37□□□□□ -0.91
DDX41-218ENST00000625286 LCKP06239 509 aa9.37□□□□□ -0.91
DDX41-218ENST00000625286 QDPRP09417 244 aa9.37□□□□□ -0.91
DDX41-218ENST00000625286 MPV17P39210 176 aa9.37□□□□□ -0.91
DDX41-218ENST00000625286 WNT5AP41221 380 aa9.37□□□□□ -0.91
DDX41-218ENST00000625286 MMP15P51511 669 aa9.37□□□□□ -0.91
DDX41-218ENST00000625286 KLF3P57682 345 aaPredicted RBP9.37□□□□□ -0.91
DDX41-218ENST00000625286 PCBP3P57721 371 aaKnown RBP9.37□□□□□ -0.91
DDX41-218ENST00000625286 UBA52P62987 128 aaKnown RBP9.37□□□□□ -0.91
DDX41-218ENST00000625286 SCARB2Q14108 478 aa9.37□□□□□ -0.91
DDX41-218ENST00000625286 TSTQ16762 297 aaKnown RBP9.37□□□□□ -0.91
DDX41-218ENST00000625286 PRR31Q5SQ13 230 aa9.37□□□□□ -0.91
DDX41-218ENST00000625286 TMEM154Q6P9G4 183 aa9.37□□□□□ -0.91
DDX41-218ENST00000625286 DLEU7Q6UYE1 221 aa9.37□□□□□ -0.91
DDX41-218ENST00000625286 ZNF101Q8IZC7 436 aa9.37□□□□□ -0.91
DDX41-218ENST00000625286 MCHR2Q969V1 340 aa9.37□□□□□ -0.91
DDX41-218ENST00000625286 LRRC58Q96CX6 371 aa9.37□□□□□ -0.91
DDX41-218ENST00000625286 ZMYND19Q96E35 227 aaPredicted RBP9.37□□□□□ -0.91
DDX41-218ENST00000625286 SLC25A44Q96H78 314 aaPredicted RBP9.37□□□□□ -0.91
DDX41-218ENST00000625286 ZNF347Q96SE7 839 aa9.37□□□□□ -0.91
DDX41-218ENST00000625286 MCHR1Q99705 422 aa9.37□□□□□ -0.91
DDX41-218ENST00000625286 ARHGDIGQ99819 225 aa9.37□□□□□ -0.91
DDX41-218ENST00000625286 EBF4Q9BQW3 602 aa9.37□□□□□ -0.91
DDX41-218ENST00000625286 ZNF747Q9BV97 191 aa9.37□□□□□ -0.91
DDX41-218ENST00000625286 MRPL13Q9BYD1 178 aaKnown RBP9.37□□□□□ -0.91
DDX41-218ENST00000625286 RAD21L1Q9H4I0 556 aa9.37□□□□□ -0.91
DDX41-218ENST00000625286 TMEM38AQ9H6F2 299 aa9.37□□□□□ -0.91
DDX41-218ENST00000625286 PPIAL4AQ9Y536 164 aa9.37□□□□□ -0.91
DDX41-218ENST00000625286 NOTCH1P46531 2555 aa9.36□□□□□ -0.91
DDX41-218ENST00000625286 TANC2Q9HCD6 1990 aa9.36□□□□□ -0.91
DDX41-218ENST00000625286 LOC100509620A0A075B734 347 aa9.36□□□□□ -0.91
DDX41-218ENST00000625286 IGKV1D-43A0A0B4J1Z2 117 aa9.36□□□□□ -0.91
DDX41-218ENST00000625286 A0A0G2JMP0 313 aa9.36□□□□□ -0.91
DDX41-218ENST00000625286 A0A0X1KG70 313 aa9.36□□□□□ -0.91
DDX41-218ENST00000625286 CPSF4LA6NMK7 179 aaKnown RBP9.36□□□□□ -0.91
DDX41-218ENST00000625286 MGRN1O60291 552 aa9.36□□□□□ -0.91
DDX41-218ENST00000625286 UBOX5O94941 541 aa9.36□□□□□ -0.91
DDX41-218ENST00000625286 MT-ATP6P00846 226 aa9.36□□□□□ -0.91
DDX41-218ENST00000625286 IGHV1-46P01743 117 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms