RNA–Protein interactions for RNA: ENST00000624354.3

VCL-207, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 3,307 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-207ENST00000624354 TBC1D3CQ6IPX1 549 aa7.93□□□□□ -1.14
VCL-207ENST00000624354 NHLRC1Q6VVB1 395 aa7.93□□□□□ -1.14
VCL-207ENST00000624354 LINC00114Q6XXX2 140 aa7.93□□□□□ -1.14
VCL-207ENST00000624354 STAC2Q6ZMT1 411 aa7.93□□□□□ -1.14
VCL-207ENST00000624354 LDLRAD3Q86YD5 345 aa7.93□□□□□ -1.14
VCL-207ENST00000624354 CBLN2Q8IUK8 224 aa7.93□□□□□ -1.14
VCL-207ENST00000624354 TBC1D3Q8IZP1 549 aaPredicted RBP7.93□□□□□ -1.14
VCL-207ENST00000624354 CTHRC1Q96CG8 243 aa7.93□□□□□ -1.14
VCL-207ENST00000624354 SCARF2Q96GP6 870 aaPredicted RBP7.93□□□□□ -1.14
VCL-207ENST00000624354 PBX4Q9BYU1 374 aa7.93□□□□□ -1.14
VCL-207ENST00000624354 RXFP3Q9NSD7 469 aa7.93□□□□□ -1.14
VCL-207ENST00000624354 PILRAQ9UKJ1 303 aa7.93□□□□□ -1.14
VCL-207ENST00000624354 LINC01553A4QN01 128 aa7.93□□□□□ -1.14
VCL-207ENST00000624354 EPOPA6NHQ4 379 aa7.93□□□□□ -1.14
VCL-207ENST00000624354 H0YGG7 62 aa7.93□□□□□ -1.14
VCL-207ENST00000624354 IMPA2O14732 288 aa7.93□□□□□ -1.14
VCL-207ENST00000624354 RBBP9O75884 186 aa7.93□□□□□ -1.14
VCL-207ENST00000624354 HTR3BO95264 441 aa7.93□□□□□ -1.14
VCL-207ENST00000624354 POU2F2P09086 479 aa7.93□□□□□ -1.14
VCL-207ENST00000624354 MNDAP41218 407 aa7.93□□□□□ -1.14
VCL-207ENST00000624354 SOX2P48431 317 aa7.93□□□□□ -1.14
VCL-207ENST00000624354 STARP49675 285 aa7.93□□□□□ -1.14
VCL-207ENST00000624354 MECP2P51608 486 aaKnown RBP7.93□□□□□ -1.14
VCL-207ENST00000624354 NR0B1P51843 470 aaKnown RBP7.93□□□□□ -1.14
VCL-207ENST00000624354 GMFBP60983 142 aa7.93□□□□□ -1.14
VCL-207ENST00000624354 ARF3P61204 181 aaPredicted RBP7.93□□□□□ -1.14
VCL-207ENST00000624354 PSG6Q00889 435 aa7.93□□□□□ -1.14
VCL-207ENST00000624354 IL10RAQ13651 578 aa7.93□□□□□ -1.14
VCL-207ENST00000624354 Q499Y3 187 aa7.93□□□□□ -1.14
VCL-207ENST00000624354 ENPP7Q6UWV6 458 aa7.93□□□□□ -1.14
VCL-207ENST00000624354 CHRDL2Q6WN34 429 aa7.93□□□□□ -1.14
VCL-207ENST00000624354 JAZF1Q86VZ6 243 aa7.93□□□□□ -1.14
VCL-207ENST00000624354 PUSL1Q8N0Z8 303 aaKnown RBP7.93□□□□□ -1.14
VCL-207ENST00000624354 SHISA5Q8N114 240 aa7.93□□□□□ -1.14
VCL-207ENST00000624354 FLVCR1-AS1Q8TAF5 88 aa7.93□□□□□ -1.14
VCL-207ENST00000624354 RPS4Y2Q8TD47 263 aa7.93□□□□□ -1.14
VCL-207ENST00000624354 RGP1Q92546 391 aaPredicted RBP7.93□□□□□ -1.14
VCL-207ENST00000624354 RASD2Q96D21 266 aa7.93□□□□□ -1.14
VCL-207ENST00000624354 GINS4Q9BRT9 223 aa7.93□□□□□ -1.14
VCL-207ENST00000624354 ALG12Q9BV10 488 aa7.93□□□□□ -1.14
VCL-207ENST00000624354 ZNF337Q9Y3M9 751 aa7.93□□□□□ -1.14
VCL-207ENST00000624354 FAM171A2A8MVW0 826 aa7.92□□□□□ -1.14
VCL-207ENST00000624354 APODP05090 189 aa7.92□□□□□ -1.14
VCL-207ENST00000624354 IFI6P09912 130 aa7.92□□□□□ -1.14
VCL-207ENST00000624354 MST1P26927 711 aa7.92□□□□□ -1.14
VCL-207ENST00000624354 GXYLT1Q4G148 440 aa7.92□□□□□ -1.14
VCL-207ENST00000624354 LEG1Q6P5S2 330 aa7.92□□□□□ -1.14
VCL-207ENST00000624354 TMPRSS12Q86WS5 348 aa7.92□□□□□ -1.14
VCL-207ENST00000624354 DND1Q8IYX4 353 aaKnown RBP7.92□□□□□ -1.14
VCL-207ENST00000624354 TMEM185AQ8NFB2 350 aa7.92□□□□□ -1.14
VCL-207ENST00000624354 OR5AK2Q8NH90 309 aa7.92□□□□□ -1.14
VCL-207ENST00000624354 ZPLD1Q8TCW7 415 aa7.92□□□□□ -1.14
VCL-207ENST00000624354 NMNAT2Q9BZQ4 307 aa7.92□□□□□ -1.14
VCL-207ENST00000624354 OR51M1Q9H341 326 aa7.92□□□□□ -1.14
VCL-207ENST00000624354 CACNA1IQ9P0X4 2223 aa7.92□□□□□ -1.14
VCL-207ENST00000624354 TRBV23-1A0A0A0MS06 115 aa7.92□□□□□ -1.14
VCL-207ENST00000624354 OR6C74A6NCV1 312 aa7.92□□□□□ -1.14
VCL-207ENST00000624354 TTLL8A6PVC2 850 aa7.92□□□□□ -1.14
VCL-207ENST00000624354 PYCARD-AS1I3L0S3 204 aa7.92□□□□□ -1.14
VCL-207ENST00000624354 PLRG1O43660 514 aaKnown RBP7.92□□□□□ -1.14
VCL-207ENST00000624354 CTNSO60931 367 aa7.92□□□□□ -1.14
VCL-207ENST00000624354 CRYBA1P05813 215 aa7.92□□□□□ -1.14
VCL-207ENST00000624354 ANXA2P07355 339 aaKnown RBP7.92□□□□□ -1.14
VCL-207ENST00000624354 OR8G3PP0DMU2 310 aa7.92□□□□□ -1.14
VCL-207ENST00000624354 PRPS1P60891 318 aa7.92□□□□□ -1.14
VCL-207ENST00000624354 RPS15P62841 145 aaKnown RBP7.92□□□□□ -1.14
VCL-207ENST00000624354 RBMS2Q15434 407 aaKnown RBP7.92□□□□□ -1.14
VCL-207ENST00000624354 ISXQ2M1V0 245 aa7.92□□□□□ -1.14
VCL-207ENST00000624354 PGAP1Q75T13 922 aa7.92□□□□□ -1.14
VCL-207ENST00000624354 GLB1L2Q8IW92 636 aa7.92□□□□□ -1.14
VCL-207ENST00000624354 OR4N2Q8NGD1 307 aa7.92□□□□□ -1.14
VCL-207ENST00000624354 ELP5Q8TE02 316 aa7.92□□□□□ -1.14
VCL-207ENST00000624354 OR1E3Q8WZA6 343 aa7.92□□□□□ -1.14
VCL-207ENST00000624354 FAM3CQ92520 227 aa7.92□□□□□ -1.14
VCL-207ENST00000624354 MIOXQ9UGB7 285 aa7.92□□□□□ -1.14
VCL-207ENST00000624354 A0A087WUJ7 227 aa7.91□□□□□ -1.14
VCL-207ENST00000624354 POM121BA6NF01 834 aa7.91□□□□□ -1.14
VCL-207ENST00000624354 ST8SIA5O15466 376 aa7.91□□□□□ -1.14
VCL-207ENST00000624354 RLN1P04808 185 aa7.91□□□□□ -1.14
VCL-207ENST00000624354 SLC35E2P0CK97 266 aa7.91□□□□□ -1.14
VCL-207ENST00000624354 ITPKBP27987 946 aa7.91□□□□□ -1.14
VCL-207ENST00000624354 CD96P40200 585 aa7.91□□□□□ -1.14
VCL-207ENST00000624354 MAT1AQ00266 395 aaKnown RBP7.91□□□□□ -1.14
VCL-207ENST00000624354 LTBQ06643 244 aa7.91□□□□□ -1.14
VCL-207ENST00000624354 ALKBH1Q13686 389 aaKnown RBP7.91□□□□□ -1.14
VCL-207ENST00000624354 SNTB1Q13884 538 aaKnown RBP7.91□□□□□ -1.14
VCL-207ENST00000624354 PCGF3Q3KNV8 242 aa7.91□□□□□ -1.14
VCL-207ENST00000624354 STPG1Q5TH74 334 aa7.91□□□□□ -1.14
VCL-207ENST00000624354 LIPNQ5VXI9 398 aa7.91□□□□□ -1.14
VCL-207ENST00000624354 TANGO2Q6ICL3 276 aa7.91□□□□□ -1.14
VCL-207ENST00000624354 CA13Q8N1Q1 262 aa7.91□□□□□ -1.14
VCL-207ENST00000624354 ZNF511Q8NB15 262 aa7.91□□□□□ -1.14
VCL-207ENST00000624354 OR52B4Q8NGK2 314 aa7.91□□□□□ -1.14
VCL-207ENST00000624354 OR6K3Q8NGY3 331 aa7.91□□□□□ -1.14
VCL-207ENST00000624354 CCL4L1Q8NHW4 92 aa7.91□□□□□ -1.14
VCL-207ENST00000624354 THAP6Q8TBB0 222 aa7.91□□□□□ -1.14
VCL-207ENST00000624354 PNPLA2Q96AD5 504 aa7.91□□□□□ -1.14
VCL-207ENST00000624354 ADAD1Q96M93 576 aaKnown RBP7.91□□□□□ -1.14
VCL-207ENST00000624354 GPR174Q9BXC1 333 aa7.91□□□□□ -1.14
VCL-207ENST00000624354 MFFQ9GZY8 342 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms