RNA–Protein interactions for RNA: ENST00000622629.4

MSH6-215, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 4,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-215ENST00000622629 SPTY2D1-AS1A0A0U1RR47 76 aa11.72□□□□□ -0.53
MSH6-215ENST00000622629 GABARAPH6UMI1 98 aa11.72□□□□□ -0.53
MSH6-215ENST00000622629 CRTAPO75718 401 aaPredicted RBP11.72□□□□□ -0.53
MSH6-215ENST00000622629 AGTR1P30556 359 aa11.72□□□□□ -0.53
MSH6-215ENST00000622629 ACY1Q03154 408 aa11.72□□□□□ -0.53
MSH6-215ENST00000622629 CAMK2DQ13557 499 aa11.72□□□□□ -0.53
MSH6-215ENST00000622629 ASB17Q8WXJ9 295 aa11.72□□□□□ -0.53
MSH6-215ENST00000622629 RNF32Q9H0A6 362 aa11.72□□□□□ -0.53
MSH6-215ENST00000622629 EMC7Q9NPA0 242 aa11.72□□□□□ -0.53
MSH6-215ENST00000622629 KCNN3Q9UGI6 736 aa11.72□□□□□ -0.53
MSH6-215ENST00000622629 SLC22A13Q9Y226 551 aa11.72□□□□□ -0.53
MSH6-215ENST00000622629 COA3Q9Y2R0 106 aaPredicted RBP11.72□□□□□ -0.53
MSH6-215ENST00000622629 ZDBF2Q9HCK1 2354 aa11.72□□□□□ -0.53
MSH6-215ENST00000622629 FITM1A5D6W6 292 aa11.72□□□□□ -0.53
MSH6-215ENST00000622629 ZNF749O43361 778 aa11.72□□□□□ -0.53
MSH6-215ENST00000622629 HTR2CP28335 458 aa11.72□□□□□ -0.53
MSH6-215ENST00000622629 POLR2HP52434 150 aaKnown RBP11.72□□□□□ -0.53
MSH6-215ENST00000622629 EEF1A1P68104 462 aaKnown RBP11.72□□□□□ -0.53
MSH6-215ENST00000622629 ACKR1Q16570 336 aa11.72□□□□□ -0.53
MSH6-215ENST00000622629 CHRFAM7AQ494W8 412 aa11.72□□□□□ -0.53
MSH6-215ENST00000622629 KANSL1Q7Z3B3 1105 aa11.72□□□□□ -0.53
MSH6-215ENST00000622629 COMTD1Q86VU5 262 aa11.72□□□□□ -0.53
MSH6-215ENST00000622629 ATPIF1Q9UII2 106 aa11.72□□□□□ -0.53
MSH6-215ENST00000622629 CES1P1Q9UKY3 287 aa11.72□□□□□ -0.53
MSH6-215ENST00000622629 COPS3Q9UNS2 423 aa11.72□□□□□ -0.53
MSH6-215ENST00000622629 VWA8A3KMH1 1905 aa11.72□□□□□ -0.53
MSH6-215ENST00000622629 C4orf51C9J302 202 aa11.72□□□□□ -0.53
MSH6-215ENST00000622629 AIPO00170 330 aa11.72□□□□□ -0.53
MSH6-215ENST00000622629 TNFRSF10AO00220 468 aa11.72□□□□□ -0.53
MSH6-215ENST00000622629 P2RY10O00398 339 aa11.72□□□□□ -0.53
MSH6-215ENST00000622629 ICOSLGO75144 302 aa11.72□□□□□ -0.53
MSH6-215ENST00000622629 ZNF780AO75290 641 aaPredicted RBP11.72□□□□□ -0.53
MSH6-215ENST00000622629 RBMXP38159 391 aaKnown RBP11.72□□□□□ -0.53
MSH6-215ENST00000622629 PRAMEF20Q5VT98 475 aa11.72□□□□□ -0.53
MSH6-215ENST00000622629 C1orf140Q5VVS0 124 aa11.72□□□□□ -0.53
MSH6-215ENST00000622629 OR14A16Q8NHC5 309 aa11.72□□□□□ -0.53
MSH6-215ENST00000622629 RNF170Q96K19 258 aa11.72□□□□□ -0.53
MSH6-215ENST00000622629 ZNF436Q9C0F3 470 aaPredicted RBP11.72□□□□□ -0.53
MSH6-215ENST00000622629 ADGRL4Q9HBW9 690 aa11.72□□□□□ -0.53
MSH6-215ENST00000622629 SLC39A1Q9NY26 324 aa11.72□□□□□ -0.53
MSH6-215ENST00000622629 KCNG2Q9UJ96 466 aa11.72□□□□□ -0.53
MSH6-215ENST00000622629 EXOGQ9Y2C4 368 aaKnown RBP11.72□□□□□ -0.53
MSH6-215ENST00000622629 LSM2Q9Y333 95 aaKnown RBP11.72□□□□□ -0.53
MSH6-215ENST00000622629 RNF215Q9Y6U7 377 aa11.72□□□□□ -0.53
MSH6-215ENST00000622629 ZSWIM8A7E2V4 1837 aa11.71□□□□□ -0.53
MSH6-215ENST00000622629 RTTNQ86VV8 2226 aa11.71□□□□□ -0.53
MSH6-215ENST00000622629 GVINP1Q7Z2Y8 2422 aa11.71□□□□□ -0.53
MSH6-215ENST00000622629 OR6C68A6NDL8 312 aa11.71□□□□□ -0.53
MSH6-215ENST00000622629 TRIM64BA6NI03 449 aa11.71□□□□□ -0.53
MSH6-215ENST00000622629 SULT2B1O00204 365 aa11.71□□□□□ -0.53
MSH6-215ENST00000622629 PLPP2O43688 288 aa11.71□□□□□ -0.53
MSH6-215ENST00000622629 CBX7O95931 251 aa11.71□□□□□ -0.53
MSH6-215ENST00000622629 HLA-AP01891 365 aaKnown RBP11.71□□□□□ -0.53
MSH6-215ENST00000622629 DCTDP32321 178 aa11.71□□□□□ -0.53
MSH6-215ENST00000622629 NUDT1P36639 197 aa11.71□□□□□ -0.53
MSH6-215ENST00000622629 PPICP45877 212 aa11.71□□□□□ -0.53
MSH6-215ENST00000622629 TAS2R19P59542 299 aa11.71□□□□□ -0.53
MSH6-215ENST00000622629 IL13RA1P78552 427 aa11.71□□□□□ -0.53
MSH6-215ENST00000622629 PUDPQ08623 228 aa11.71□□□□□ -0.53
MSH6-215ENST00000622629 SLC43A2Q8N370 569 aa11.71□□□□□ -0.53
MSH6-215ENST00000622629 TMEM52Q8NDY8 209 aa11.71□□□□□ -0.53
MSH6-215ENST00000622629 OR5T2Q8NGG2 359 aa11.71□□□□□ -0.53
MSH6-215ENST00000622629 OR51S1Q8NGJ8 323 aa11.71□□□□□ -0.53
MSH6-215ENST00000622629 DHRS1Q96LJ7 313 aa11.71□□□□□ -0.53
MSH6-215ENST00000622629 SRPK3Q9UPE1 567 aa11.71□□□□□ -0.53
MSH6-215ENST00000622629 A0A087WUJ7 227 aa11.71□□□□□ -0.53
MSH6-215ENST00000622629 KNG1P01042 644 aa11.71□□□□□ -0.53
MSH6-215ENST00000622629 SLC2A1P11166 492 aa11.71□□□□□ -0.53
MSH6-215ENST00000622629 MYF5P13349 255 aa11.71□□□□□ -0.53
MSH6-215ENST00000622629 NFYAP23511 347 aaPredicted RBP11.71□□□□□ -0.53
MSH6-215ENST00000622629 TAS2R20P59543 309 aa11.71□□□□□ -0.53
MSH6-215ENST00000622629 TDGQ13569 410 aa11.71□□□□□ -0.53
MSH6-215ENST00000622629 PTCRAQ6ISU1 281 aaPredicted RBP11.71□□□□□ -0.53
MSH6-215ENST00000622629 STEAP1BQ6NZ63 245 aa11.71□□□□□ -0.53
MSH6-215ENST00000622629 PAPD4Q6PIY7 484 aaKnown RBP11.71□□□□□ -0.53
MSH6-215ENST00000622629 TSSK4Q6SA08 328 aa11.71□□□□□ -0.53
MSH6-215ENST00000622629 ZNF546Q86UE3 836 aa11.71□□□□□ -0.53
MSH6-215ENST00000622629 PTTG3PQ9NZH4 202 aa11.71□□□□□ -0.53
MSH6-215ENST00000622629 STEAP1Q9UHE8 339 aa11.71□□□□□ -0.53
MSH6-215ENST00000622629 TMEM82A0PJX8 343 aa11.71□□□□□ -0.54
MSH6-215ENST00000622629 A8MVM7 634 aa11.71□□□□□ -0.54
MSH6-215ENST00000622629 HRKO00198 91 aa11.71□□□□□ -0.54
MSH6-215ENST00000622629 ZFPL1O95159 310 aa11.71□□□□□ -0.54
MSH6-215ENST00000622629 TMEM225BP0DP42 221 aa11.71□□□□□ -0.54
MSH6-215ENST00000622629 ZNF35P13682 527 aa11.71□□□□□ -0.54
MSH6-215ENST00000622629 ZNF28P17035 718 aa11.71□□□□□ -0.54
MSH6-215ENST00000622629 KIR2DL1P43626 348 aaPredicted RBP11.71□□□□□ -0.54
MSH6-215ENST00000622629 CAPZBP47756 277 aa11.71□□□□□ -0.54
MSH6-215ENST00000622629 ELAVL1Q15717 326 aaKnown RBP11.71□□□□□ -0.54
MSH6-215ENST00000622629 OR5D14Q8NGL3 314 aa11.71□□□□□ -0.54
MSH6-215ENST00000622629 ST6GALNAC5Q9BVH7 336 aa11.71□□□□□ -0.54
MSH6-215ENST00000622629 NXF2Q9GZY0 626 aaKnown RBP11.71□□□□□ -0.54
MSH6-215ENST00000622629 DNAJB12Q9NXW2 375 aaKnown RBP11.71□□□□□ -0.54
MSH6-215ENST00000622629 MLXQ9UH92 298 aa11.71□□□□□ -0.54
MSH6-215ENST00000622629 NUP50Q9UKX7 468 aa11.71□□□□□ -0.54
MSH6-215ENST00000622629 MMACHCQ9Y4U1 282 aa11.71□□□□□ -0.54
MSH6-215ENST00000622629 DSPPQ9NZW4 1301 aa11.7□□□□□ -0.54
MSH6-215ENST00000622629 A0A1B0GTH9 108 aa11.7□□□□□ -0.54
MSH6-215ENST00000622629 A0A1W2PPC4 97 aa11.7□□□□□ -0.54
MSH6-215ENST00000622629 RAB3AP20336 220 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms