RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 BLOC1S6Q9UL45 172 aa15.82■□□□□ 0.12
PTCHD3-202ENST00000622555 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.82■□□□□ 0.12
PTCHD3-202ENST00000622555 RCE1Q9Y256 329 aa15.82■□□□□ 0.12
PTCHD3-202ENST00000622555 NOSIPQ9Y314 301 aaKnown RBP15.82■□□□□ 0.12
PTCHD3-202ENST00000622555 ZNF724A8MTY0 619 aa15.81■□□□□ 0.12
PTCHD3-202ENST00000622555 ZNF701M0R085 212 aaPredicted RBP15.81■□□□□ 0.12
PTCHD3-202ENST00000622555 EDN3P14138 238 aa15.81■□□□□ 0.12
PTCHD3-202ENST00000622555 SPI1P17947 270 aa15.81■□□□□ 0.12
PTCHD3-202ENST00000622555 SLC2A5P22732 501 aa15.81■□□□□ 0.12
PTCHD3-202ENST00000622555 TTKP33981 857 aa15.81■□□□□ 0.12
PTCHD3-202ENST00000622555 SELENOPP49908 381 aa15.81■□□□□ 0.12
PTCHD3-202ENST00000622555 LGALS3BPQ08380 585 aa15.81■□□□□ 0.12
PTCHD3-202ENST00000622555 RPTNQ6XPR3 784 aa15.81■□□□□ 0.12
PTCHD3-202ENST00000622555 MEPCEQ7L2J0 689 aaKnown RBP15.81■□□□□ 0.12
PTCHD3-202ENST00000622555 OR51L1Q8NGJ5 315 aa15.81■□□□□ 0.12
PTCHD3-202ENST00000622555 OR2T4Q8NH00 348 aa15.81■□□□□ 0.12
PTCHD3-202ENST00000622555 CPT1CQ8TCG5 803 aa15.81■□□□□ 0.12
PTCHD3-202ENST00000622555 WNT2BQ93097 391 aa15.81■□□□□ 0.12
PTCHD3-202ENST00000622555 TMEM45BQ96B21 275 aa15.81■□□□□ 0.12
PTCHD3-202ENST00000622555 NUAK2Q9H093 628 aa15.81■□□□□ 0.12
PTCHD3-202ENST00000622555 RNF122Q9H9V4 155 aa15.81■□□□□ 0.12
PTCHD3-202ENST00000622555 PLCXD1Q9NUJ7 323 aa15.81■□□□□ 0.12
PTCHD3-202ENST00000622555 RPL36Q9Y3U8 105 aaKnown RBP15.81■□□□□ 0.12
PTCHD3-202ENST00000622555 SHANK1Q9Y566 2161 aa15.81■□□□□ 0.12
PTCHD3-202ENST00000622555 RP1L1Q8IWN7 2480 aaPredicted RBP15.81■□□□□ 0.12
PTCHD3-202ENST00000622555 SPENQ96T58 3664 aaKnown RBP15.8■□□□□ 0.12
PTCHD3-202ENST00000622555 PRRG2O14669 202 aa15.8■□□□□ 0.12
PTCHD3-202ENST00000622555 SLC16A7O60669 478 aa15.8■□□□□ 0.12
PTCHD3-202ENST00000622555 ZNF432O94892 652 aa15.8■□□□□ 0.12
PTCHD3-202ENST00000622555 YES1P07947 543 aa15.8■□□□□ 0.12
PTCHD3-202ENST00000622555 HTR1FP30939 366 aa15.8■□□□□ 0.12
PTCHD3-202ENST00000622555 PYCR1P32322 319 aa15.8■□□□□ 0.12
PTCHD3-202ENST00000622555 PTGER4P35408 488 aa15.8■□□□□ 0.12
PTCHD3-202ENST00000622555 ZNF91Q05481 1191 aa15.8■□□□□ 0.12
PTCHD3-202ENST00000622555 RBPJQ06330 500 aa15.8■□□□□ 0.12
PTCHD3-202ENST00000622555 FMODQ06828 376 aa15.8■□□□□ 0.12
PTCHD3-202ENST00000622555 NSUN5P2Q63ZY6 315 aa15.8■□□□□ 0.12
PTCHD3-202ENST00000622555 KCTD8Q6ZWB6 473 aa15.8■□□□□ 0.12
PTCHD3-202ENST00000622555 TMEM123Q8N131 208 aa15.8■□□□□ 0.12
PTCHD3-202ENST00000622555 OR6V1Q8N148 313 aa15.8■□□□□ 0.12
PTCHD3-202ENST00000622555 ZNF540Q8NDQ6 660 aa15.8■□□□□ 0.12
PTCHD3-202ENST00000622555 PROKR2Q8NFJ6 384 aa15.8■□□□□ 0.12
PTCHD3-202ENST00000622555 OR6N1Q8NGY5 312 aa15.8■□□□□ 0.12
PTCHD3-202ENST00000622555 NMD3Q96D46 503 aaKnown RBP15.8■□□□□ 0.12
PTCHD3-202ENST00000622555 RBP7Q96R05 134 aa15.8■□□□□ 0.12
PTCHD3-202ENST00000622555 RHNO1Q9BSD3 238 aa15.8■□□□□ 0.12
PTCHD3-202ENST00000622555 TPRKBQ9Y3C4 175 aa15.8■□□□□ 0.12
PTCHD3-202ENST00000622555 CCDC182A6NF36 153 aa15.8■□□□□ 0.12
PTCHD3-202ENST00000622555 CD8B2A6NJW9 211 aa15.8■□□□□ 0.12
PTCHD3-202ENST00000622555 SLC22A31A6NKX4 558 aa15.8■□□□□ 0.12
PTCHD3-202ENST00000622555 FAM171A2A8MVW0 826 aa15.8■□□□□ 0.12
PTCHD3-202ENST00000622555 PTGES3LE9PB15 166 aa15.8■□□□□ 0.12
PTCHD3-202ENST00000622555 DCTN6O00399 190 aa15.8■□□□□ 0.12
PTCHD3-202ENST00000622555 SLC43A1O75387 559 aa15.8■□□□□ 0.12
PTCHD3-202ENST00000622555 DBTP11182 482 aaKnown RBP15.8■□□□□ 0.12
PTCHD3-202ENST00000622555 EEF1B2P24534 225 aaKnown RBP15.8■□□□□ 0.12
PTCHD3-202ENST00000622555 NTF4P34130 210 aa15.8■□□□□ 0.12
PTCHD3-202ENST00000622555 CSNK1A1P48729 337 aa15.8■□□□□ 0.12
PTCHD3-202ENST00000622555 C1orf185Q5T7R7 199 aa15.8■□□□□ 0.12
PTCHD3-202ENST00000622555 B3GLCTQ6Y288 498 aa15.8■□□□□ 0.12
PTCHD3-202ENST00000622555 GPR141Q7Z602 305 aa15.8■□□□□ 0.12
PTCHD3-202ENST00000622555 OR6K6Q8NGW6 343 aa15.8■□□□□ 0.12
PTCHD3-202ENST00000622555 TEAD3Q99594 435 aa15.8■□□□□ 0.12
PTCHD3-202ENST00000622555 GP6Q9HCN6 339 aa15.8■□□□□ 0.12
PTCHD3-202ENST00000622555 RSL24D1Q9UHA3 163 aaKnown RBP15.8■□□□□ 0.12
PTCHD3-202ENST00000622555 FKBP7Q9Y680 259 aa15.8■□□□□ 0.12
PTCHD3-202ENST00000622555 NBEAQ8NFP9 2946 aa15.79■□□□□ 0.12
PTCHD3-202ENST00000622555 CENPBD1B2RD01 187 aa15.79■□□□□ 0.12
PTCHD3-202ENST00000622555 SLC19A2O60779 497 aa15.79■□□□□ 0.12
PTCHD3-202ENST00000622555 MRPL33O75394 65 aaKnown RBP15.79■□□□□ 0.12
PTCHD3-202ENST00000622555 CTLA4P16410 223 aa15.79■□□□□ 0.12
PTCHD3-202ENST00000622555 CRABP1P29762 137 aa15.79■□□□□ 0.12
PTCHD3-202ENST00000622555 MTNR1AP48039 350 aa15.79■□□□□ 0.12
PTCHD3-202ENST00000622555 SH3BGRP55822 239 aaPredicted RBP15.79■□□□□ 0.12
PTCHD3-202ENST00000622555 THEM4Q5T1C6 240 aa15.79■□□□□ 0.12
PTCHD3-202ENST00000622555 DNM1P34Q6PK57 102 aa15.79■□□□□ 0.12
PTCHD3-202ENST00000622555 AHSA2Q719I0 299 aa15.79■□□□□ 0.12
PTCHD3-202ENST00000622555 C9orf106Q8NAJ2 232 aa15.79■□□□□ 0.12
PTCHD3-202ENST00000622555 ZNRF4Q8WWF5 429 aa15.79■□□□□ 0.12
PTCHD3-202ENST00000622555 GGHQ92820 318 aa15.79■□□□□ 0.12
PTCHD3-202ENST00000622555 RNFT2Q96EX2 444 aa15.79■□□□□ 0.12
PTCHD3-202ENST00000622555 GMPPAQ96IJ6 420 aaPredicted RBP15.79■□□□□ 0.12
PTCHD3-202ENST00000622555 TM9SF2Q99805 663 aa15.79■□□□□ 0.12
PTCHD3-202ENST00000622555 GLRX2Q9NS18 164 aa15.79■□□□□ 0.12
PTCHD3-202ENST00000622555 PARPBPQ9NWS1 579 aa15.79■□□□□ 0.12
PTCHD3-202ENST00000622555 WARS2Q9UGM6 360 aaKnown RBP15.79■□□□□ 0.12
PTCHD3-202ENST00000622555 PSORS1C1Q9UIG5 152 aa15.79■□□□□ 0.12
PTCHD3-202ENST00000622555 B9D1Q9UPM9 204 aa15.79■□□□□ 0.12
PTCHD3-202ENST00000622555 FAM215AQ9Y5M1 114 aa15.79■□□□□ 0.12
PTCHD3-202ENST00000622555 FREM1Q5H8C1 2179 aa15.78■□□□□ 0.12
PTCHD3-202ENST00000622555 HTR1AP08908 422 aa15.78■□□□□ 0.12
PTCHD3-202ENST00000622555 HOXD4P09016 255 aaPredicted RBP15.78■□□□□ 0.12
PTCHD3-202ENST00000622555 NR2C1P13056 603 aa15.78■□□□□ 0.12
PTCHD3-202ENST00000622555 AGTR1P30556 359 aa15.78■□□□□ 0.12
PTCHD3-202ENST00000622555 CENPAP49450 140 aa15.78■□□□□ 0.12
PTCHD3-202ENST00000622555 SLC35D3Q5M8T2 416 aa15.78■□□□□ 0.12
PTCHD3-202ENST00000622555 LCN1P1Q5VSP4 162 aa15.78■□□□□ 0.12
PTCHD3-202ENST00000622555 XAF1Q6GPH4 301 aa15.78■□□□□ 0.12
PTCHD3-202ENST00000622555 RTL6Q6ICC9 239 aa15.78■□□□□ 0.12
PTCHD3-202ENST00000622555 C3P1Q6ZMU1 363 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms