RNA–Protein interactions for RNA: ENST00000622183.1

CPNE3-213, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 156 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-213ENST00000622183 C22orf42Q6IC83 251 aa3.33□□□□□ -1.88
CPNE3-213ENST00000622183 ANKRD26P1Q6NSI1 321 aa3.33□□□□□ -1.88
CPNE3-213ENST00000622183 EIF3MQ7L2H7 374 aaKnown RBP3.33□□□□□ -1.88
CPNE3-213ENST00000622183 SLC16A14Q7RTX9 510 aa3.33□□□□□ -1.88
CPNE3-213ENST00000622183 IQCKQ8N0W5 287 aa3.33□□□□□ -1.88
CPNE3-213ENST00000622183 HSD17B11Q8NBQ5 300 aa3.33□□□□□ -1.88
CPNE3-213ENST00000622183 OR4A4PQ8NGN8 299 aa3.33□□□□□ -1.88
CPNE3-213ENST00000622183 OR6X1Q8NH79 312 aa3.33□□□□□ -1.88
CPNE3-213ENST00000622183 MCOLN3Q8TDD5 553 aa3.33□□□□□ -1.88
CPNE3-213ENST00000622183 OSBPL10Q9BXB5 764 aa3.33□□□□□ -1.88
CPNE3-213ENST00000622183 NEUROG2Q9H2A3 272 aa3.33□□□□□ -1.88
CPNE3-213ENST00000622183 CLMPQ9H6B4 373 aa3.33□□□□□ -1.88
CPNE3-213ENST00000622183 ING4Q9UNL4 249 aa3.33□□□□□ -1.88
CPNE3-213ENST00000622183 TRAPPC4Q9Y296 219 aa3.33□□□□□ -1.88
CPNE3-213ENST00000622183 PHF3Q92576 2039 aaKnown RBP3.32□□□□□ -1.88
CPNE3-213ENST00000622183 TRAV39A0A0B4J263 110 aa3.32□□□□□ -1.88
CPNE3-213ENST00000622183 TRIM49D1C9J1S8 452 aa3.32□□□□□ -1.88
CPNE3-213ENST00000622183 H3BNH8 94 aa3.32□□□□□ -1.88
CPNE3-213ENST00000622183 SIRPB1O00241 398 aa3.32□□□□□ -1.88
CPNE3-213ENST00000622183 CASQ2O14958 399 aaPredicted RBP3.32□□□□□ -1.88
CPNE3-213ENST00000622183 EIF3HO15372 352 aaKnown RBP eCLIP3.32□□□□□ -1.88
CPNE3-213ENST00000622183 ASGR1P07306 291 aa3.32□□□□□ -1.88
CPNE3-213ENST00000622183 FOLR1P15328 257 aa3.32□□□□□ -1.88
CPNE3-213ENST00000622183 RCC1P18754 421 aaPredicted RBP3.32□□□□□ -1.88
CPNE3-213ENST00000622183 SERPINB5P36952 375 aa3.32□□□□□ -1.88
CPNE3-213ENST00000622183 SLC26A3P40879 764 aa3.32□□□□□ -1.88
CPNE3-213ENST00000622183 AQP2P41181 271 aa3.32□□□□□ -1.88
CPNE3-213ENST00000622183 RAB9AP51151 201 aa3.32□□□□□ -1.88
CPNE3-213ENST00000622183 UNC119Q13432 240 aa3.32□□□□□ -1.88
CPNE3-213ENST00000622183 CHRNA6Q15825 494 aa3.32□□□□□ -1.88
CPNE3-213ENST00000622183 C1orf185Q5T7R7 199 aa3.32□□□□□ -1.88
CPNE3-213ENST00000622183 REEP3Q6NUK4 255 aa3.32□□□□□ -1.88
CPNE3-213ENST00000622183 TMEM220Q6QAJ8 160 aa3.32□□□□□ -1.88
CPNE3-213ENST00000622183 H2AFVQ71UI9 128 aa3.32□□□□□ -1.88
CPNE3-213ENST00000622183 OFCC1Q8IZS5 231 aa3.32□□□□□ -1.88
CPNE3-213ENST00000622183 DTX3LQ8TDB6 740 aa3.32□□□□□ -1.88
CPNE3-213ENST00000622183 NRGNQ92686 78 aa3.32□□□□□ -1.88
CPNE3-213ENST00000622183 LRRC58Q96CX6 371 aa3.32□□□□□ -1.88
CPNE3-213ENST00000622183 PIK3IP1Q96FE7 263 aa3.32□□□□□ -1.88
CPNE3-213ENST00000622183 AURKBQ96GD4 344 aaPredicted RBP3.32□□□□□ -1.88
CPNE3-213ENST00000622183 AUNIPQ9H7T9 357 aa3.32□□□□□ -1.88
CPNE3-213ENST00000622183 CTPS2Q9NRF8 586 aa3.32□□□□□ -1.88
CPNE3-213ENST00000622183 SLC25A37Q9NYZ2 338 aa3.32□□□□□ -1.88
CPNE3-213ENST00000622183 UXTQ9UBK9 157 aaPredicted RBP3.32□□□□□ -1.88
CPNE3-213ENST00000622183 RPS6KB2Q9UBS0 482 aa3.32□□□□□ -1.88
CPNE3-213ENST00000622183 TP53TG5Q9Y2B4 290 aa3.32□□□□□ -1.88
CPNE3-213ENST00000622183 PDS5BQ9NTI5 1447 aa3.31□□□□□ -1.88
CPNE3-213ENST00000622183 TRBV9A0A0B4J1U6 114 aa3.31□□□□□ -1.88
CPNE3-213ENST00000622183 GLYATL1P3A0A0U1RQE8 302 aa3.31□□□□□ -1.88
CPNE3-213ENST00000622183 SMCO2A6NFE2 343 aa3.31□□□□□ -1.88
CPNE3-213ENST00000622183 H0YIV9 168 aa3.31□□□□□ -1.88
CPNE3-213ENST00000622183 PANO1I0J062 215 aa3.31□□□□□ -1.88
CPNE3-213ENST00000622183 NDUFAB1O14561 156 aa3.31□□□□□ -1.88
CPNE3-213ENST00000622183 CLIC3O95833 236 aa3.31□□□□□ -1.88
CPNE3-213ENST00000622183 C6orf47O95873 294 aa3.31□□□□□ -1.88
CPNE3-213ENST00000622183 DUX4L4P0CJ87 422 aa3.31□□□□□ -1.88
CPNE3-213ENST00000622183 DNAH10OSP0CZ25 163 aa3.31□□□□□ -1.88
CPNE3-213ENST00000622183 SMIM10L1P0DMW3 83 aa3.31□□□□□ -1.88
CPNE3-213ENST00000622183 SLC1A1P43005 524 aa3.31□□□□□ -1.88
CPNE3-213ENST00000622183 RFX3P48380 749 aa3.31□□□□□ -1.88
CPNE3-213ENST00000622183 NOVP48745 357 aa3.31□□□□□ -1.88
CPNE3-213ENST00000622183 KRTAP10-5P60370 271 aa3.31□□□□□ -1.88
CPNE3-213ENST00000622183 ACTA2P62736 377 aa3.31□□□□□ -1.88
CPNE3-213ENST00000622183 RPS21P63220 83 aaKnown RBP3.31□□□□□ -1.88
CPNE3-213ENST00000622183 ACTG2P63267 376 aa3.31□□□□□ -1.88
CPNE3-213ENST00000622183 ACTC1P68032 377 aa3.31□□□□□ -1.88
CPNE3-213ENST00000622183 ACTA1P68133 377 aa3.31□□□□□ -1.88
CPNE3-213ENST00000622183 ADARB1P78563 741 aaKnown RBP3.31□□□□□ -1.88
CPNE3-213ENST00000622183 ECH1Q13011 328 aa3.31□□□□□ -1.88
CPNE3-213ENST00000622183 SELENBP1Q13228 472 aa3.31□□□□□ -1.88
CPNE3-213ENST00000622183 IL18Q14116 193 aa3.31□□□□□ -1.88
CPNE3-213ENST00000622183 CLINT1Q14677 625 aa3.31□□□□□ -1.88
CPNE3-213ENST00000622183 ZBED5Q49AG3 693 aa3.31□□□□□ -1.88
CPNE3-213ENST00000622183 PPM1LQ5SGD2 360 aa3.31□□□□□ -1.88
CPNE3-213ENST00000622183 ZNF621Q6ZSS3 439 aa3.31□□□□□ -1.88
CPNE3-213ENST00000622183 OR10R2Q8NGX6 335 aa3.31□□□□□ -1.88
CPNE3-213ENST00000622183 SLC7A13Q8TCU3 470 aa3.31□□□□□ -1.88
CPNE3-213ENST00000622183 BLOC1S5Q8TDH9 187 aa3.31□□□□□ -1.88
CPNE3-213ENST00000622183 GEMIN6Q8WXD5 167 aaKnown RBP3.31□□□□□ -1.88
CPNE3-213ENST00000622183 STARD8Q92502 1023 aa3.31□□□□□ -1.88
CPNE3-213ENST00000622183 SMIM10Q96HG1 83 aa3.31□□□□□ -1.88
CPNE3-213ENST00000622183 P2RX4Q99571 388 aa3.31□□□□□ -1.88
CPNE3-213ENST00000622183 BPIFA3Q9BQP9 254 aa3.31□□□□□ -1.88
CPNE3-213ENST00000622183 ASB8Q9H765 288 aa3.31□□□□□ -1.88
CPNE3-213ENST00000622183 TMEM165Q9HC07 324 aa3.31□□□□□ -1.88
CPNE3-213ENST00000622183 LYARQ9NX58 379 aaKnown RBP3.31□□□□□ -1.88
CPNE3-213ENST00000622183 ANAPC11Q9NYG5 84 aa3.31□□□□□ -1.88
CPNE3-213ENST00000622183 NOTCH3Q9UM47 2321 aa3.3□□□□□ -1.88
CPNE3-213ENST00000622183 INSRP06213 1382 aa3.3□□□□□ -1.88
CPNE3-213ENST00000622183 WDR19Q8NEZ3 1342 aa3.3□□□□□ -1.88
CPNE3-213ENST00000622183 LRRIQ4A6NIV6 560 aa3.3□□□□□ -1.88
CPNE3-213ENST00000622183 XKRYO14609 159 aa3.3□□□□□ -1.88
CPNE3-213ENST00000622183 DNAJB6O75190 326 aa3.3□□□□□ -1.88
CPNE3-213ENST00000622183 ERCC1P07992 297 aaPredicted RBP3.3□□□□□ -1.88
CPNE3-213ENST00000622183 OR8G3PP0DMU2 310 aa3.3□□□□□ -1.88
CPNE3-213ENST00000622183 EIF2S2P20042 333 aaKnown RBP3.3□□□□□ -1.88
CPNE3-213ENST00000622183 CDKN1BP46527 198 aa3.3□□□□□ -1.88
CPNE3-213ENST00000622183 CSNK1DP48730 415 aa3.3□□□□□ -1.88
CPNE3-213ENST00000622183 CX3CR1P49238 355 aa3.3□□□□□ -1.88
CPNE3-213ENST00000622183 LIPEQ05469 1076 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms