RNA–Protein interactions for RNA: ENST00000621399.1

CIRBP-245, Transcript of cold inducible RNA binding protein, humanhuman

TSL 1 (best)

Gene CIRBP, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-245ENST00000621399 KCNK17Q96T54 332 aa16.3■□□□□ 0.2
CIRBP-245ENST00000621399 ALG12Q9BV10 488 aa16.3■□□□□ 0.2
CIRBP-245ENST00000621399 SLC17A5Q9NRA2 495 aa16.3■□□□□ 0.2
CIRBP-245ENST00000621399 MAGED1Q9Y5V3 778 aaPredicted RBP16.3■□□□□ 0.2
CIRBP-245ENST00000621399 CELSR2Q9HCU4 2923 aa16.3■□□□□ 0.2
CIRBP-245ENST00000621399 TEX15Q9BXT5 2789 aa16.3■□□□□ 0.2
CIRBP-245ENST00000621399 UNC79Q9P2D8 2635 aa16.3■□□□□ 0.2
CIRBP-245ENST00000621399 A0A096LPE4 126 aa16.29■□□□□ 0.2
CIRBP-245ENST00000621399 A0A1W2PPZ6 126 aa16.29■□□□□ 0.2
CIRBP-245ENST00000621399 A0A1W2PR80 420 aa16.29■□□□□ 0.2
CIRBP-245ENST00000621399 ERICH4A6NGS2 130 aa16.29■□□□□ 0.2
CIRBP-245ENST00000621399 A6NNC1 897 aa16.29■□□□□ 0.2
CIRBP-245ENST00000621399 ANKRD65E5RJM6 399 aa16.29■□□□□ 0.2
CIRBP-245ENST00000621399 DHHO43323 396 aa16.29■□□□□ 0.2
CIRBP-245ENST00000621399 NR2C1P13056 603 aa16.29■□□□□ 0.2
CIRBP-245ENST00000621399 ANXA8P13928 327 aa16.29■□□□□ 0.2
CIRBP-245ENST00000621399 CRYGSP22914 178 aa16.29■□□□□ 0.2
CIRBP-245ENST00000621399 SSTR2P30874 369 aa16.29■□□□□ 0.2
CIRBP-245ENST00000621399 SDHAP31040 664 aa16.29■□□□□ 0.2
CIRBP-245ENST00000621399 TLE4Q04727 773 aa16.29■□□□□ 0.2
CIRBP-245ENST00000621399 TBRG1Q3YBR2 411 aa16.29■□□□□ 0.2
CIRBP-245ENST00000621399 CLEC12AQ5QGZ9 265 aa16.29■□□□□ 0.2
CIRBP-245ENST00000621399 KLHL24Q6TFL4 600 aa16.29■□□□□ 0.2
CIRBP-245ENST00000621399 CD300LDQ6UXZ3 194 aa16.29■□□□□ 0.2
CIRBP-245ENST00000621399 SSX8Q7RTT4 187 aa16.29■□□□□ 0.2
CIRBP-245ENST00000621399 HIPK1Q86Z02 1210 aa16.29■□□□□ 0.2
CIRBP-245ENST00000621399 LURAP1LQ8IV03 231 aa16.29■□□□□ 0.2
CIRBP-245ENST00000621399 CLDN22Q8N7P3 220 aa16.29■□□□□ 0.2
CIRBP-245ENST00000621399 ATG16L2Q8NAA4 619 aa16.29■□□□□ 0.2
CIRBP-245ENST00000621399 MAGEE2Q8TD90 523 aaPredicted RBP16.29■□□□□ 0.2
CIRBP-245ENST00000621399 RASD2Q96D21 266 aa16.29■□□□□ 0.2
CIRBP-245ENST00000621399 C14orf79Q96F83 325 aa16.29■□□□□ 0.2
CIRBP-245ENST00000621399 BOD1Q96IK1 185 aa16.29■□□□□ 0.2
CIRBP-245ENST00000621399 SEMA6AQ9H2E6 1030 aa16.29■□□□□ 0.2
CIRBP-245ENST00000621399 IL20Q9NYY1 176 aa16.29■□□□□ 0.2
CIRBP-245ENST00000621399 NOTCH2Q04721 2471 aa16.28■□□□□ 0.2
CIRBP-245ENST00000621399 PKDREJQ9NTG1 2253 aa16.28■□□□□ 0.2
CIRBP-245ENST00000621399 G3V2T6 193 aa16.28■□□□□ 0.2
CIRBP-245ENST00000621399 H3BNX3 289 aa16.28■□□□□ 0.2
CIRBP-245ENST00000621399 SOCS2O14508 198 aa16.28■□□□□ 0.2
CIRBP-245ENST00000621399 SEC14L2O76054 403 aa16.28■□□□□ 0.2
CIRBP-245ENST00000621399 SOX14O95416 240 aa16.28■□□□□ 0.2
CIRBP-245ENST00000621399 TXNDC12O95881 172 aa16.28■□□□□ 0.2
CIRBP-245ENST00000621399 IGFBP1P08833 259 aaPredicted RBP16.28■□□□□ 0.2
CIRBP-245ENST00000621399 APEHP13798 732 aaKnown RBP16.28■□□□□ 0.2
CIRBP-245ENST00000621399 ZNF23P17027 643 aa16.28■□□□□ 0.2
CIRBP-245ENST00000621399 NOS3P29474 1203 aa16.28■□□□□ 0.2
CIRBP-245ENST00000621399 ZNF84P51523 738 aa16.28■□□□□ 0.2
CIRBP-245ENST00000621399 UBE2NP61088 152 aaKnown RBP16.28■□□□□ 0.2
CIRBP-245ENST00000621399 KRR1Q13601 381 aaKnown RBP16.28■□□□□ 0.2
CIRBP-245ENST00000621399 MESTQ5EB52 335 aa16.28■□□□□ 0.2
CIRBP-245ENST00000621399 THEM4Q5T1C6 240 aa16.28■□□□□ 0.2
CIRBP-245ENST00000621399 FBXW10Q5XX13 1052 aa16.28■□□□□ 0.2
CIRBP-245ENST00000621399 WDR31Q8NA23 367 aa16.28■□□□□ 0.2
CIRBP-245ENST00000621399 FNDC8Q8TC99 324 aa16.28■□□□□ 0.2
CIRBP-245ENST00000621399 CENPNQ96H22 339 aaPredicted RBP16.28■□□□□ 0.2
CIRBP-245ENST00000621399 FOXB1Q99853 325 aa16.28■□□□□ 0.2
CIRBP-245ENST00000621399 PLA2G12AQ9BZM1 189 aa16.28■□□□□ 0.2
CIRBP-245ENST00000621399 NGBQ9NPG2 151 aa16.28■□□□□ 0.2
CIRBP-245ENST00000621399 TBC1D23Q9NUY8 699 aa16.28■□□□□ 0.2
CIRBP-245ENST00000621399 KIF17Q9P2E2 1029 aa16.28■□□□□ 0.2
CIRBP-245ENST00000621399 AMDHD2Q9Y303 409 aa16.28■□□□□ 0.2
CIRBP-245ENST00000621399 SLC25A15Q9Y619 301 aa16.28■□□□□ 0.2
CIRBP-245ENST00000621399 H3BN98 237 aa16.27■□□□□ 0.2
CIRBP-245ENST00000621399 H7C1C5 153 aa16.27■□□□□ 0.2
CIRBP-245ENST00000621399 IMPA2O14732 288 aa16.27■□□□□ 0.2
CIRBP-245ENST00000621399 ARPC3O15145 178 aa16.27■□□□□ 0.2
CIRBP-245ENST00000621399 AHCYL1O43865 530 aa16.27■□□□□ 0.2
CIRBP-245ENST00000621399 SLC2A10O95528 541 aa16.27■□□□□ 0.2
CIRBP-245ENST00000621399 WNT11O96014 354 aa16.27■□□□□ 0.2
CIRBP-245ENST00000621399 PRF1P14222 555 aa16.27■□□□□ 0.2
CIRBP-245ENST00000621399 HOXB1P14653 301 aaPredicted RBP16.27■□□□□ 0.2
CIRBP-245ENST00000621399 LCN6P62502 163 aa16.27■□□□□ 0.2
CIRBP-245ENST00000621399 FMODQ06828 376 aa16.27■□□□□ 0.2
CIRBP-245ENST00000621399 KLHL17Q6TDP4 642 aa16.27■□□□□ 0.2
CIRBP-245ENST00000621399 ZNF813Q6ZN06 617 aa16.27■□□□□ 0.2
CIRBP-245ENST00000621399 ADCK1Q86TW2 530 aa16.27■□□□□ 0.2
CIRBP-245ENST00000621399 ZDHHC13Q8IUH4 622 aa16.27■□□□□ 0.2
CIRBP-245ENST00000621399 NSMAFQ92636 917 aa16.27■□□□□ 0.2
CIRBP-245ENST00000621399 STMN2Q93045 179 aa16.27■□□□□ 0.2
CIRBP-245ENST00000621399 NMD3Q96D46 503 aaKnown RBP16.27■□□□□ 0.2
CIRBP-245ENST00000621399 PKP2Q99959 881 aa16.27■□□□□ 0.2
CIRBP-245ENST00000621399 TSSK6Q9BXA6 273 aa16.27■□□□□ 0.2
CIRBP-245ENST00000621399 SMURF2Q9HAU4 748 aa16.27■□□□□ 0.2
CIRBP-245ENST00000621399 S100A14Q9HCY8 104 aa16.27■□□□□ 0.2
CIRBP-245ENST00000621399 ALPK2Q86TB3 2170 aa16.27■□□□□ 0.19
CIRBP-245ENST00000621399 SLC22A23A1A5C7 686 aa16.26■□□□□ 0.19
CIRBP-245ENST00000621399 PRSS37A4D1T9 235 aa16.26■□□□□ 0.19
CIRBP-245ENST00000621399 IDH3BO43837 385 aa16.26■□□□□ 0.19
CIRBP-245ENST00000621399 CTAG2O75638 210 aa16.26■□□□□ 0.19
CIRBP-245ENST00000621399 GOSR1O95249 250 aa16.26■□□□□ 0.19
CIRBP-245ENST00000621399 B4GALT1P15291 398 aa16.26■□□□□ 0.19
CIRBP-245ENST00000621399 ZNF133P52736 654 aaPredicted RBP16.26■□□□□ 0.19
CIRBP-245ENST00000621399 SLC36A3Q495N2 470 aa16.26■□□□□ 0.19
CIRBP-245ENST00000621399 BEX5Q5H9J7 111 aa16.26■□□□□ 0.19
CIRBP-245ENST00000621399 C10orf128Q5T292 105 aa16.26■□□□□ 0.19
CIRBP-245ENST00000621399 C1QTNF12Q5T7M4 302 aa16.26■□□□□ 0.19
CIRBP-245ENST00000621399 SLC25A47Q6Q0C1 308 aa16.26■□□□□ 0.19
CIRBP-245ENST00000621399 TMEM200AQ86VY9 491 aa16.26■□□□□ 0.19
CIRBP-245ENST00000621399 JAZF1Q86VZ6 243 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms