RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 ZNF550Q7Z398 422 aa6.36□□□□□ -1.39
NEDD9-216ENST00000620854 SPRED2Q7Z698 418 aa6.36□□□□□ -1.39
NEDD9-216ENST00000620854 ZNF546Q86UE3 836 aa6.36□□□□□ -1.39
NEDD9-216ENST00000620854 FAM219AQ8IW50 185 aa6.36□□□□□ -1.39
NEDD9-216ENST00000620854 LINC00518Q8N0U6 118 aa6.36□□□□□ -1.39
NEDD9-216ENST00000620854 OR6V1Q8N148 313 aa6.36□□□□□ -1.39
NEDD9-216ENST00000620854 CSNK1A1LQ8N752 337 aa6.36□□□□□ -1.39
NEDD9-216ENST00000620854 OR51D1Q8NGF3 324 aa6.36□□□□□ -1.39
NEDD9-216ENST00000620854 RASD2Q96D21 266 aa6.36□□□□□ -1.39
NEDD9-216ENST00000620854 SMIM19Q96E16 107 aa6.36□□□□□ -1.39
NEDD9-216ENST00000620854 ANKRD19PQ9H560 264 aa6.36□□□□□ -1.39
NEDD9-216ENST00000620854 RXFP3Q9NSD7 469 aa6.36□□□□□ -1.39
NEDD9-216ENST00000620854 STARD5Q9NSY2 213 aa6.36□□□□□ -1.39
NEDD9-216ENST00000620854 OR5V1Q9UGF6 321 aa6.36□□□□□ -1.39
NEDD9-216ENST00000620854 OPN4Q9UHM6 478 aa6.36□□□□□ -1.39
NEDD9-216ENST00000620854 GPN3Q9UHW5 284 aaPredicted RBP6.36□□□□□ -1.39
NEDD9-216ENST00000620854 KCNE5Q9UJ90 142 aa6.36□□□□□ -1.39
NEDD9-216ENST00000620854 FBXO4Q9UKT5 387 aa6.36□□□□□ -1.39
NEDD9-216ENST00000620854 GPR34Q9UPC5 381 aa6.36□□□□□ -1.39
NEDD9-216ENST00000620854 ARHGEF17Q96PE2 2063 aaPredicted RBP6.36□□□□□ -1.39
NEDD9-216ENST00000620854 A0A1B0GUH1 482 aa6.36□□□□□ -1.39
NEDD9-216ENST00000620854 TMEM72A0PK05 275 aa6.36□□□□□ -1.39
NEDD9-216ENST00000620854 F5H5P2 479 aa6.36□□□□□ -1.39
NEDD9-216ENST00000620854 GABARAPH6UMI1 98 aa6.36□□□□□ -1.39
NEDD9-216ENST00000620854 SPINT1O43278 529 aa6.36□□□□□ -1.39
NEDD9-216ENST00000620854 KLF4O43474 513 aa6.36□□□□□ -1.39
NEDD9-216ENST00000620854 TPPPO94811 219 aa6.36□□□□□ -1.39
NEDD9-216ENST00000620854 FARS2O95363 451 aaKnown RBP6.36□□□□□ -1.39
NEDD9-216ENST00000620854 IFNA21P01568 189 aa6.36□□□□□ -1.39
NEDD9-216ENST00000620854 ZNF888P0CJ79 500 aaPredicted RBP6.36□□□□□ -1.39
NEDD9-216ENST00000620854 NAT2P11245 290 aa6.36□□□□□ -1.39
NEDD9-216ENST00000620854 PRKAR1BP31321 381 aa6.36□□□□□ -1.39
NEDD9-216ENST00000620854 AQP2P41181 271 aa6.36□□□□□ -1.39
NEDD9-216ENST00000620854 LUMP51884 338 aaPredicted RBP6.36□□□□□ -1.39
NEDD9-216ENST00000620854 NANOS3P60323 173 aaKnown RBP6.36□□□□□ -1.39
NEDD9-216ENST00000620854 TMEM31Q5JXX7 168 aa6.36□□□□□ -1.39
NEDD9-216ENST00000620854 FAM69AQ5T7M9 428 aa6.36□□□□□ -1.39
NEDD9-216ENST00000620854 GLT8D1Q68CQ7 371 aa6.36□□□□□ -1.39
NEDD9-216ENST00000620854 EIF5AL1Q6IS14 154 aaKnown RBP6.36□□□□□ -1.39
NEDD9-216ENST00000620854 MFSD12Q6NUT3 480 aa6.36□□□□□ -1.39
NEDD9-216ENST00000620854 UNQ6126/PRO20091Q6UXV3 157 aa6.36□□□□□ -1.39
NEDD9-216ENST00000620854 USP53Q70EK8 1073 aa6.36□□□□□ -1.39
NEDD9-216ENST00000620854 SLC29A4Q7RTT9 530 aa6.36□□□□□ -1.39
NEDD9-216ENST00000620854 PNLDC1Q8NA58 520 aaKnown RBP6.36□□□□□ -1.39
NEDD9-216ENST00000620854 OR5T2Q8NGG2 359 aa6.36□□□□□ -1.39
NEDD9-216ENST00000620854 OR4C16Q8NGL9 310 aa6.36□□□□□ -1.39
NEDD9-216ENST00000620854 HAVCR2Q8TDQ0 301 aa6.36□□□□□ -1.39
NEDD9-216ENST00000620854 Q96M85 177 aa6.36□□□□□ -1.39
NEDD9-216ENST00000620854 ZNF578Q96N58 590 aaPredicted RBP6.36□□□□□ -1.39
NEDD9-216ENST00000620854 C12orf57Q99622 126 aa6.36□□□□□ -1.39
NEDD9-216ENST00000620854 HDAC8Q9BY41 377 aa6.36□□□□□ -1.39
NEDD9-216ENST00000620854 WASH6PQ9NQA3 447 aa6.36□□□□□ -1.39
NEDD9-216ENST00000620854 MBNL1Q9NR56 388 aaKnown RBP6.36□□□□□ -1.39
NEDD9-216ENST00000620854 ZNF701Q9NV72 531 aaPredicted RBP6.36□□□□□ -1.39
NEDD9-216ENST00000620854 ST6GALNAC2Q9UJ37 374 aa6.36□□□□□ -1.39
NEDD9-216ENST00000620854 ERVK-19Q9WJR5 959 aa6.36□□□□□ -1.39
NEDD9-216ENST00000620854 DENND4CQ5VZ89 1909 aa6.36□□□□□ -1.39
NEDD9-216ENST00000620854 AIPO00170 330 aa6.35□□□□□ -1.39
NEDD9-216ENST00000620854 AGPAT2O15120 278 aa6.35□□□□□ -1.39
NEDD9-216ENST00000620854 GALR3O60755 368 aaPredicted RBP6.35□□□□□ -1.39
NEDD9-216ENST00000620854 CLEC3AO75596 197 aa6.35□□□□□ -1.39
NEDD9-216ENST00000620854 GIPP09681 153 aaPredicted RBP6.35□□□□□ -1.39
NEDD9-216ENST00000620854 PVRP15151 417 aa6.35□□□□□ -1.39
NEDD9-216ENST00000620854 DLX5P56178 289 aa6.35□□□□□ -1.39
NEDD9-216ENST00000620854 RPS11P62280 158 aaKnown RBP eCLIP6.35□□□□□ -1.39
NEDD9-216ENST00000620854 BDH1Q02338 343 aa6.35□□□□□ -1.39
NEDD9-216ENST00000620854 TFAP2EQ6VUC0 442 aa6.35□□□□□ -1.39
NEDD9-216ENST00000620854 CBLN2Q8IUK8 224 aa6.35□□□□□ -1.39
NEDD9-216ENST00000620854 GLB1L2Q8IW92 636 aa6.35□□□□□ -1.39
NEDD9-216ENST00000620854 SLC35F2Q8IXU6 374 aa6.35□□□□□ -1.39
NEDD9-216ENST00000620854 OR10AC1Q8NH08 325 aa6.35□□□□□ -1.39
NEDD9-216ENST00000620854 STOML3Q8TAV4 291 aa6.35□□□□□ -1.39
NEDD9-216ENST00000620854 MRPS24Q96EL2 167 aaKnown RBP6.35□□□□□ -1.39
NEDD9-216ENST00000620854 GFI1Q99684 422 aa6.35□□□□□ -1.39
NEDD9-216ENST00000620854 ZCCHC4Q9H5U6 513 aa6.35□□□□□ -1.39
NEDD9-216ENST00000620854 TMEM231Q9H6L2 316 aa6.35□□□□□ -1.39
NEDD9-216ENST00000620854 PELI2Q9HAT8 420 aa6.35□□□□□ -1.39
NEDD9-216ENST00000620854 TAS2R5Q9NYW4 299 aa6.35□□□□□ -1.39
NEDD9-216ENST00000620854 DHDHQ9UQ10 334 aa6.35□□□□□ -1.39
NEDD9-216ENST00000620854 MEMO1Q9Y316 297 aa6.35□□□□□ -1.39
NEDD9-216ENST00000620854 A8MXK9 166 aa6.35□□□□□ -1.39
NEDD9-216ENST00000620854 M0QYG6 137 aa6.35□□□□□ -1.39
NEDD9-216ENST00000620854 ADAM11O75078 769 aa6.35□□□□□ -1.39
NEDD9-216ENST00000620854 GPANK1O95872 356 aa6.35□□□□□ -1.39
NEDD9-216ENST00000620854 CD3DP04234 171 aa6.35□□□□□ -1.39
NEDD9-216ENST00000620854 GLAP06280 429 aa6.35□□□□□ -1.39
NEDD9-216ENST00000620854 PPP3CBP16298 524 aa6.35□□□□□ -1.39
NEDD9-216ENST00000620854 LSSP48449 732 aa6.35□□□□□ -1.39
NEDD9-216ENST00000620854 TAS2R20P59543 309 aa6.35□□□□□ -1.39
NEDD9-216ENST00000620854 RAB2AP61019 212 aa6.35□□□□□ -1.39
NEDD9-216ENST00000620854 EIF5AP63241 154 aaKnown RBP6.35□□□□□ -1.39
NEDD9-216ENST00000620854 RNASE10Q5GAN6 216 aaKnown RBP6.35□□□□□ -1.39
NEDD9-216ENST00000620854 PDSS1Q5T2R2 415 aa6.35□□□□□ -1.39
NEDD9-216ENST00000620854 CARD17Q5XLA6 110 aa6.35□□□□□ -1.39
NEDD9-216ENST00000620854 ARHGAP11AQ6P4F7 1023 aa6.35□□□□□ -1.39
NEDD9-216ENST00000620854 TSSK4Q6SA08 328 aa6.35□□□□□ -1.39
NEDD9-216ENST00000620854 BPIFCQ8NFQ6 507 aa6.35□□□□□ -1.39
NEDD9-216ENST00000620854 OR51A4Q8NGJ6 313 aa6.35□□□□□ -1.39
NEDD9-216ENST00000620854 C3orf49Q96BT1 292 aa6.35□□□□□ -1.39
NEDD9-216ENST00000620854 MOAP1Q96BY2 351 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms