RNA–Protein interactions for RNA: ENST00000620394.1

SRRT-218, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-218ENST00000620394 HPS1Q92902 700 aa18.96■□□□□ 0.63
SRRT-218ENST00000620394 LRRC58Q96CX6 371 aa18.96■□□□□ 0.63
SRRT-218ENST00000620394 SEPHS2Q99611 448 aa18.96■□□□□ 0.63
SRRT-218ENST00000620394 SH3GL1Q99961 368 aa18.96■□□□□ 0.63
SRRT-218ENST00000620394 MRPL37Q9BZE1 423 aaKnown RBP18.96■□□□□ 0.63
SRRT-218ENST00000620394 POLR2J2Q9GZM3 115 aaKnown RBP18.96■□□□□ 0.63
SRRT-218ENST00000620394 POLR2J3Q9H1A7 115 aaKnown RBP18.96■□□□□ 0.63
SRRT-218ENST00000620394 TMEFF2Q9UIK5 374 aaPredicted RBP18.96■□□□□ 0.63
SRRT-218ENST00000620394 SPEF1Q9Y4P9 236 aa18.96■□□□□ 0.63
SRRT-218ENST00000620394 BBIP1A8MTZ0 92 aa18.95■□□□□ 0.62
SRRT-218ENST00000620394 RNF13O43567 381 aa18.95■□□□□ 0.62
SRRT-218ENST00000620394 RPS23P62266 143 aaKnown RBP18.95■□□□□ 0.62
SRRT-218ENST00000620394 MELKQ14680 651 aa18.95■□□□□ 0.62
SRRT-218ENST00000620394 NRN1LQ496H8 165 aa18.95■□□□□ 0.62
SRRT-218ENST00000620394 LRFN4Q6PJG9 635 aa18.95■□□□□ 0.62
SRRT-218ENST00000620394 NANOGNBQ7Z5D8 188 aa18.95■□□□□ 0.62
SRRT-218ENST00000620394 SKA3Q8IX90 412 aa18.95■□□□□ 0.62
SRRT-218ENST00000620394 SLC22A24Q8N4F4 322 aa18.95■□□□□ 0.62
SRRT-218ENST00000620394 ZFAND2BQ8WV99 257 aa18.95■□□□□ 0.62
SRRT-218ENST00000620394 ZMYND19Q96E35 227 aaPredicted RBP18.95■□□□□ 0.62
SRRT-218ENST00000620394 LRP5LA4QPB2 252 aa18.94■□□□□ 0.62
SRRT-218ENST00000620394 M0R233 179 aa18.94■□□□□ 0.62
SRRT-218ENST00000620394 DHHO43323 396 aa18.94■□□□□ 0.62
SRRT-218ENST00000620394 SYNGR3O43761 229 aa18.94■□□□□ 0.62
SRRT-218ENST00000620394 MT-ND1P03886 318 aa18.94■□□□□ 0.62
SRRT-218ENST00000620394 SERPINA5P05154 406 aa18.94■□□□□ 0.62
SRRT-218ENST00000620394 OR8G3PP0DMU2 310 aa18.94■□□□□ 0.62
SRRT-218ENST00000620394 PCMT1P22061 227 aa18.94■□□□□ 0.62
SRRT-218ENST00000620394 RBM34P42696 430 aaKnown RBP18.94■□□□□ 0.62
SRRT-218ENST00000620394 RIN1Q13671 783 aa18.94■□□□□ 0.62
SRRT-218ENST00000620394 HIST3H3Q16695 136 aa18.94■□□□□ 0.62
SRRT-218ENST00000620394 REP15Q6BDI9 236 aa18.94■□□□□ 0.62
SRRT-218ENST00000620394 ERICH5Q6P6B1 374 aa18.94■□□□□ 0.62
SRRT-218ENST00000620394 CARM1Q86X55 608 aa18.94■□□□□ 0.62
SRRT-218ENST00000620394 LINC01356Q8N9X3 169 aa18.94■□□□□ 0.62
SRRT-218ENST00000620394 FGFBP3Q8TAT2 258 aa18.94■□□□□ 0.62
SRRT-218ENST00000620394 SLC7A8Q9UHI5 535 aa18.94■□□□□ 0.62
SRRT-218ENST00000620394 BAG5Q9UL15 447 aa18.94■□□□□ 0.62
SRRT-218ENST00000620394 A0A0A6YYJ9 748 aa18.93■□□□□ 0.62
SRRT-218ENST00000620394 CENPBD1B2RD01 187 aa18.93■□□□□ 0.62
SRRT-218ENST00000620394 LILRA1O75019 489 aa18.93■□□□□ 0.62
SRRT-218ENST00000620394 OR5F1O95221 314 aa18.93■□□□□ 0.62
SRRT-218ENST00000620394 IGHG1P01857 330 aa18.93■□□□□ 0.62
SRRT-218ENST00000620394 HIST1H2ABP04908 130 aa18.93■□□□□ 0.62
SRRT-218ENST00000620394 ADRA2AP08913 450 aa18.93■□□□□ 0.62
SRRT-218ENST00000620394 TSPAN19P0C672 248 aa18.93■□□□□ 0.62
SRRT-218ENST00000620394 UGT2B15P54855 530 aa18.93■□□□□ 0.62
SRRT-218ENST00000620394 RPL18Q07020 188 aaKnown RBP18.93■□□□□ 0.62
SRRT-218ENST00000620394 KLF10Q13118 480 aa18.93■□□□□ 0.62
SRRT-218ENST00000620394 RAB39AQ14964 217 aa18.93■□□□□ 0.62
SRRT-218ENST00000620394 HIST3H2AQ7L7L0 130 aa18.93■□□□□ 0.62
SRRT-218ENST00000620394 DPPA2Q7Z7J5 298 aa18.93■□□□□ 0.62
SRRT-218ENST00000620394 NOXO1Q8NFA2 376 aa18.93■□□□□ 0.62
SRRT-218ENST00000620394 UBASH3BQ8TF42 649 aa18.93■□□□□ 0.62
SRRT-218ENST00000620394 LIPHQ8WWY8 451 aa18.93■□□□□ 0.62
SRRT-218ENST00000620394 HIST1H2ACQ93077 130 aa18.93■□□□□ 0.62
SRRT-218ENST00000620394 ECSITQ9BQ95 431 aa18.93■□□□□ 0.62
SRRT-218ENST00000620394 MRPL13Q9BYD1 178 aaKnown RBP18.93■□□□□ 0.62
SRRT-218ENST00000620394 SH3GLB1Q9Y371 365 aa18.93■□□□□ 0.62
SRRT-218ENST00000620394 SH3PXD2BA1X283 911 aa18.92■□□□□ 0.62
SRRT-218ENST00000620394 MRASO14807 208 aa18.92■□□□□ 0.62
SRRT-218ENST00000620394 BCL10O95999 233 aa18.92■□□□□ 0.62
SRRT-218ENST00000620394 TROVE2P10155 538 aaKnown RBP eCLIP18.92■□□□□ 0.62
SRRT-218ENST00000620394 UMPSP11172 480 aa18.92■□□□□ 0.62
SRRT-218ENST00000620394 APEX1P27695 318 aaKnown RBP18.92■□□□□ 0.62
SRRT-218ENST00000620394 ZNF133P52736 654 aaPredicted RBP18.92■□□□□ 0.62
SRRT-218ENST00000620394 GALK2Q01415 458 aa18.92■□□□□ 0.62
SRRT-218ENST00000620394 MAPRE2Q15555 327 aa18.92■□□□□ 0.62
SRRT-218ENST00000620394 CGB2Q6NT52 195 aa18.92■□□□□ 0.62
SRRT-218ENST00000620394 UGT2A3Q6UWM9 527 aa18.92■□□□□ 0.62
SRRT-218ENST00000620394 NKAIN4Q8IVV8 208 aa18.92■□□□□ 0.62
SRRT-218ENST00000620394 ASB10Q8WXI3 467 aa18.92■□□□□ 0.62
SRRT-218ENST00000620394 ZNF583Q96ND8 569 aa18.92■□□□□ 0.62
SRRT-218ENST00000620394 TPK1Q9H3S4 243 aa18.92■□□□□ 0.62
SRRT-218ENST00000620394 SAR1AQ9NR31 198 aa18.92■□□□□ 0.62
SRRT-218ENST00000620394 NPIPB13A6NJU9 1138 aa18.91■□□□□ 0.62
SRRT-218ENST00000620394 FAM220BPB1ANY3 271 aa18.91■□□□□ 0.62
SRRT-218ENST00000620394 NPIPB4C9JG80 1138 aa18.91■□□□□ 0.62
SRRT-218ENST00000620394 OR7A10O76100 309 aa18.91■□□□□ 0.62
SRRT-218ENST00000620394 PATE4P0C8F1 98 aa18.91■□□□□ 0.62
SRRT-218ENST00000620394 THRBP10828 461 aa18.91■□□□□ 0.62
SRRT-218ENST00000620394 TNFRSF1BP20333 461 aa18.91■□□□□ 0.62
SRRT-218ENST00000620394 IL2RGP31785 369 aa18.91■□□□□ 0.62
SRRT-218ENST00000620394 CDH15P55291 814 aa18.91■□□□□ 0.62
SRRT-218ENST00000620394 TAS2R41P59536 307 aa18.91■□□□□ 0.62
SRRT-218ENST00000620394 HDDC2Q7Z4H3 204 aa18.91■□□□□ 0.62
SRRT-218ENST00000620394 SEMA6DQ8NFY4 1073 aa18.91■□□□□ 0.62
SRRT-218ENST00000620394 PFN4Q8NHR9 129 aa18.91■□□□□ 0.62
SRRT-218ENST00000620394 TMEM255BQ8WV15 326 aa18.91■□□□□ 0.62
SRRT-218ENST00000620394 MS4A5Q9H3V2 200 aa18.91■□□□□ 0.62
SRRT-218ENST00000620394 C20orf141Q9NUB4 165 aa18.91■□□□□ 0.62
SRRT-218ENST00000620394 FGFR1OP2Q9NVK5 253 aa18.91■□□□□ 0.62
SRRT-218ENST00000620394 REV1Q9UBZ9 1251 aa18.91■□□□□ 0.62
SRRT-218ENST00000620394 METRNQ9UJH8 293 aa18.91■□□□□ 0.62
SRRT-218ENST00000620394 BLOC1S5-TXNDC5H3BN57 136 aa18.9■□□□□ 0.62
SRRT-218ENST00000620394 FARS2O95363 451 aaKnown RBP18.9■□□□□ 0.62
SRRT-218ENST00000620394 SNAP29O95721 258 aa18.9■□□□□ 0.62
SRRT-218ENST00000620394 QDPRP09417 244 aa18.9■□□□□ 0.62
SRRT-218ENST00000620394 LSP1P33241 339 aa18.9■□□□□ 0.62
SRRT-218ENST00000620394 ARFIP2P53365 341 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms