RNA–Protein interactions for RNA: ENST00000618534.4

NEK3-208, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NEK3, Length 2,414 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-208ENST00000618534 ST8SIA4Q92187 359 aa18.5■□□□□ 0.55
NEK3-208ENST00000618534 ZNF524Q96C55 264 aa18.5■□□□□ 0.55
NEK3-208ENST00000618534 AMELYQ99218 206 aa18.5■□□□□ 0.55
NEK3-208ENST00000618534 OR10A5Q9H207 317 aa18.5■□□□□ 0.55
NEK3-208ENST00000618534 TMEM138Q9NPI0 162 aa18.5■□□□□ 0.55
NEK3-208ENST00000618534 C12orf4Q9NQ89 552 aa18.5■□□□□ 0.55
NEK3-208ENST00000618534 TAS2R8Q9NYW2 309 aa18.5■□□□□ 0.55
NEK3-208ENST00000618534 MED11Q9P086 117 aa18.5■□□□□ 0.55
NEK3-208ENST00000618534 CLDN16Q9Y5I7 305 aa18.5■□□□□ 0.55
NEK3-208ENST00000618534 TCRBV16S1A1N1A0A5B0 115 aa18.49■□□□□ 0.55
NEK3-208ENST00000618534 SLC22A23A1A5C7 686 aa18.49■□□□□ 0.55
NEK3-208ENST00000618534 TMEM212A6NML5 194 aa18.49■□□□□ 0.55
NEK3-208ENST00000618534 CA3P07451 260 aa18.49■□□□□ 0.55
NEK3-208ENST00000618534 ASAH2BP0C7U1 165 aa18.49■□□□□ 0.55
NEK3-208ENST00000618534 RNH1P13489 461 aaKnown RBP18.49■□□□□ 0.55
NEK3-208ENST00000618534 ALOX5APP20292 161 aa18.49■□□□□ 0.55
NEK3-208ENST00000618534 MAOAP21397 527 aa18.49■□□□□ 0.55
NEK3-208ENST00000618534 CALCRP30988 508 aa18.49■□□□□ 0.55
NEK3-208ENST00000618534 KIR3DL2P43630 455 aa18.49■□□□□ 0.55
NEK3-208ENST00000618534 POU3F4P49335 361 aa18.49■□□□□ 0.55
NEK3-208ENST00000618534 SCAND1P57086 179 aa18.49■□□□□ 0.55
NEK3-208ENST00000618534 NKX3-1Q99801 234 aaPredicted RBP18.49■□□□□ 0.55
NEK3-208ENST00000618534 CHST6Q9GZX3 395 aa18.49■□□□□ 0.55
NEK3-208ENST00000618534 CHURC1-FNTBB4DL54 471 aa18.49■□□□□ 0.55
NEK3-208ENST00000618534 ZNF432O94892 652 aa18.49■□□□□ 0.55
NEK3-208ENST00000618534 PNMTP11086 282 aa18.49■□□□□ 0.55
NEK3-208ENST00000618534 MST1P26927 711 aa18.49■□□□□ 0.55
NEK3-208ENST00000618534 TSSK4Q6SA08 328 aa18.49■□□□□ 0.55
NEK3-208ENST00000618534 NAXDQ8IW45 347 aa18.49■□□□□ 0.55
NEK3-208ENST00000618534 ZNF440Q8IYI8 595 aa18.49■□□□□ 0.55
NEK3-208ENST00000618534 AVL9Q8NBF6 648 aa18.49■□□□□ 0.55
NEK3-208ENST00000618534 LIPHQ8WWY8 451 aa18.49■□□□□ 0.55
NEK3-208ENST00000618534 ATOH1Q92858 354 aaPredicted RBP18.49■□□□□ 0.55
NEK3-208ENST00000618534 DVL3Q92997 716 aaPredicted RBP18.49■□□□□ 0.55
NEK3-208ENST00000618534 KLHDC3Q9BQ90 382 aa18.49■□□□□ 0.55
NEK3-208ENST00000618534 IGFLR1Q9H665 355 aa18.49■□□□□ 0.55
NEK3-208ENST00000618534 EXOSC3Q9NQT5 275 aaKnown RBP18.49■□□□□ 0.55
NEK3-208ENST00000618534 PRTFDC1Q9NRG1 225 aa18.49■□□□□ 0.55
NEK3-208ENST00000618534 CDV3Q9UKY7 258 aaKnown RBP18.49■□□□□ 0.55
NEK3-208ENST00000618534 FAM221BA6H8Z2 402 aa18.48■□□□□ 0.55
NEK3-208ENST00000618534 TXNDC12O95881 172 aa18.48■□□□□ 0.55
NEK3-208ENST00000618534 CD3DP04234 171 aa18.48■□□□□ 0.55
NEK3-208ENST00000618534 ITGA5P08648 1049 aa18.48■□□□□ 0.55
NEK3-208ENST00000618534 AKAIN1P0CW23 69 aa18.48■□□□□ 0.55
NEK3-208ENST00000618534 ATXN8OSP0DMR3 200 aa18.48■□□□□ 0.55
NEK3-208ENST00000618534 NAGAP17050 411 aa18.48■□□□□ 0.55
NEK3-208ENST00000618534 CSF2RBP32927 897 aa18.48■□□□□ 0.55
NEK3-208ENST00000618534 MAZP56270 477 aaKnown RBP18.48■□□□□ 0.55
NEK3-208ENST00000618534 CPEB4Q17RY0 729 aaKnown RBP eCLIP18.48■□□□□ 0.55
NEK3-208ENST00000618534 OOSP2Q86WS3 158 aa18.48■□□□□ 0.55
NEK3-208ENST00000618534 OR8S1Q8NH09 359 aa18.48■□□□□ 0.55
NEK3-208ENST00000618534 TSEN15Q8WW01 171 aaKnown RBP18.48■□□□□ 0.55
NEK3-208ENST00000618534 HERVK_113Q902F9 699 aa18.48■□□□□ 0.55
NEK3-208ENST00000618534 MCHR2Q969V1 340 aa18.48■□□□□ 0.55
NEK3-208ENST00000618534 KTI12Q96EK9 354 aaPredicted RBP18.48■□□□□ 0.55
NEK3-208ENST00000618534 C4orf45Q96LM5 186 aa18.48■□□□□ 0.55
NEK3-208ENST00000618534 ELF4Q99607 663 aaPredicted RBP18.48■□□□□ 0.55
NEK3-208ENST00000618534 DPYSL5Q9BPU6 564 aa18.48■□□□□ 0.55
NEK3-208ENST00000618534 SYT4Q9H2B2 425 aa18.48■□□□□ 0.55
NEK3-208ENST00000618534 APMAPQ9HDC9 416 aa18.48■□□□□ 0.55
NEK3-208ENST00000618534 CACNA1CQ13936 2221 aa18.48■□□□□ 0.55
NEK3-208ENST00000618534 KRBOX1C9JBD0 128 aa18.48■□□□□ 0.55
NEK3-208ENST00000618534 CTRB1P17538 263 aa18.48■□□□□ 0.55
NEK3-208ENST00000618534 IGLV3-21P80748 117 aaPredicted RBP18.48■□□□□ 0.55
NEK3-208ENST00000618534 ZNF542PQ5EBM4 170 aa18.48■□□□□ 0.55
NEK3-208ENST00000618534 WDR38Q5JTN6 314 aa18.48■□□□□ 0.55
NEK3-208ENST00000618534 CTRB2Q6GPI1 263 aa18.48■□□□□ 0.55
NEK3-208ENST00000618534 PHOSPHO1Q8TCT1 267 aa18.48■□□□□ 0.55
NEK3-208ENST00000618534 GAS2L1Q99501 681 aaPredicted RBP18.48■□□□□ 0.55
NEK3-208ENST00000618534 LRP4O75096 1905 aa18.47■□□□□ 0.55
NEK3-208ENST00000618534 ALPK2Q86TB3 2170 aa18.47■□□□□ 0.55
NEK3-208ENST00000618534 FGF2P09038 288 aa18.47■□□□□ 0.55
NEK3-208ENST00000618534 SORDQ00796 357 aa18.47■□□□□ 0.55
NEK3-208ENST00000618534 EGR3Q06889 387 aa18.47■□□□□ 0.55
NEK3-208ENST00000618534 SKP2Q13309 424 aa18.47■□□□□ 0.55
NEK3-208ENST00000618534 C4orf46Q504U0 113 aa18.47■□□□□ 0.55
NEK3-208ENST00000618534 FNDC7Q5VTL7 733 aa18.47■□□□□ 0.55
NEK3-208ENST00000618534 ZNF660Q6AZW8 331 aaPredicted RBP18.47■□□□□ 0.55
NEK3-208ENST00000618534 C11orf88Q6PI97 169 aa18.47■□□□□ 0.55
NEK3-208ENST00000618534 ARSKQ6UWY0 536 aa18.47■□□□□ 0.55
NEK3-208ENST00000618534 Q6ZSR6 202 aa18.47■□□□□ 0.55
NEK3-208ENST00000618534 FRMD1Q8N878 549 aa18.47■□□□□ 0.55
NEK3-208ENST00000618534 OR1S1Q8NH92 325 aa18.47■□□□□ 0.55
NEK3-208ENST00000618534 DNAJA3Q96EY1 480 aa18.47■□□□□ 0.55
NEK3-208ENST00000618534 ZNF578Q96N58 590 aaPredicted RBP18.47■□□□□ 0.55
NEK3-208ENST00000618534 INTS14Q96SY0 518 aa18.47■□□□□ 0.55
NEK3-208ENST00000618534 KCNG2Q9UJ96 466 aa18.47■□□□□ 0.55
NEK3-208ENST00000618534 RAD1O60671 282 aa18.47■□□□□ 0.55
NEK3-208ENST00000618534 MED25Q71SY5 747 aa18.47■□□□□ 0.55
NEK3-208ENST00000618534 KRT77Q7Z794 578 aa18.47■□□□□ 0.55
NEK3-208ENST00000618534 STPG2Q8N412 459 aa18.47■□□□□ 0.55
NEK3-208ENST00000618534 ZNF615Q8N8J6 731 aa18.47■□□□□ 0.55
NEK3-208ENST00000618534 BVESQ8NE79 360 aa18.47■□□□□ 0.55
NEK3-208ENST00000618534 STK35Q8TDR2 534 aa18.47■□□□□ 0.55
NEK3-208ENST00000618534 DCBLD2Q96PD2 775 aa18.47■□□□□ 0.55
NEK3-208ENST00000618534 EXO5Q9H790 373 aa18.47■□□□□ 0.55
NEK3-208ENST00000618534 MRPS33Q9Y291 106 aaKnown RBP18.47■□□□□ 0.55
NEK3-208ENST00000618534 IGF2P01344 180 aa18.46■□□□□ 0.55
NEK3-208ENST00000618534 CCKBRP32239 447 aa18.46■□□□□ 0.55
NEK3-208ENST00000618534 RASGEF1BQ0VAM2 473 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms