RNA–Protein interactions for RNA: ENST00000618441.5

MATR3-227, Transcript of matrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MATR3, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-227ENST00000618441 ZNF763Q0D2J5 394 aa11.24□□□□□ -0.61
MATR3-227ENST00000618441 VRK3Q8IV63 474 aa11.24□□□□□ -0.61
MATR3-227ENST00000618441 OR4K17Q8NGC6 315 aa11.24□□□□□ -0.61
MATR3-227ENST00000618441 OR56B1Q8NGI3 324 aa11.24□□□□□ -0.61
MATR3-227ENST00000618441 OR6K6Q8NGW6 343 aa11.24□□□□□ -0.61
MATR3-227ENST00000618441 G6PC3Q9BUM1 346 aa11.24□□□□□ -0.61
MATR3-227ENST00000618441 DPH1Q9BZG8 443 aa11.24□□□□□ -0.61
MATR3-227ENST00000618441 SOHLH2Q9NX45 425 aa11.24□□□□□ -0.61
MATR3-227ENST00000618441 A0A0G2JK05 382 aa11.24□□□□□ -0.61
MATR3-227ENST00000618441 MARCH11A6NNE9 402 aa11.24□□□□□ -0.61
MATR3-227ENST00000618441 UMAD1C9J7I0 102 aa11.24□□□□□ -0.61
MATR3-227ENST00000618441 FOXE1O00358 373 aaPredicted RBP11.24□□□□□ -0.61
MATR3-227ENST00000618441 GPR32O75388 356 aa11.24□□□□□ -0.61
MATR3-227ENST00000618441 CDX1P47902 265 aaPredicted RBP11.24□□□□□ -0.61
MATR3-227ENST00000618441 SULT1A1P50225 295 aa11.24□□□□□ -0.61
MATR3-227ENST00000618441 DCDP81605 110 aaKnown RBP11.24□□□□□ -0.61
MATR3-227ENST00000618441 CDK5Q00535 292 aa11.24□□□□□ -0.61
MATR3-227ENST00000618441 INPP5JQ15735 1006 aaPredicted RBP11.24□□□□□ -0.61
MATR3-227ENST00000618441 ZNF239Q16600 458 aaKnown RBP11.24□□□□□ -0.61
MATR3-227ENST00000618441 TANGO2Q6ICL3 276 aa11.24□□□□□ -0.61
MATR3-227ENST00000618441 IGF2-ASQ6U949 168 aa11.24□□□□□ -0.61
MATR3-227ENST00000618441 C17orf99Q6UX52 265 aa11.24□□□□□ -0.61
MATR3-227ENST00000618441 NKAIN3Q8N8D7 197 aa11.24□□□□□ -0.61
MATR3-227ENST00000618441 OR13C9Q8NGT0 318 aa11.24□□□□□ -0.61
MATR3-227ENST00000618441 OR56A3Q8NH54 315 aa11.24□□□□□ -0.61
MATR3-227ENST00000618441 ELOVL1Q9BW60 279 aa11.24□□□□□ -0.61
MATR3-227ENST00000618441 HCAR1Q9BXC0 346 aa11.24□□□□□ -0.61
MATR3-227ENST00000618441 CHST8Q9H2A9 424 aa11.24□□□□□ -0.61
MATR3-227ENST00000618441 KCNJ16Q9NPI9 418 aa11.24□□□□□ -0.61
MATR3-227ENST00000618441 TRPV2Q9Y5S1 764 aa11.24□□□□□ -0.61
MATR3-227ENST00000618441 RBBP6Q7Z6E9 1792 aaKnown RBP11.24□□□□□ -0.61
MATR3-227ENST00000618441 C9JQL5 133 aa11.24□□□□□ -0.61
MATR3-227ENST00000618441 NPC1O15118 1278 aa11.24□□□□□ -0.61
MATR3-227ENST00000618441 RAP1AP62834 184 aa11.24□□□□□ -0.61
MATR3-227ENST00000618441 TCEA2Q15560 299 aa11.24□□□□□ -0.61
MATR3-227ENST00000618441 FAM180AQ6UWF9 173 aa11.24□□□□□ -0.61
MATR3-227ENST00000618441 LCTLQ6UWM7 567 aa11.24□□□□□ -0.61
MATR3-227ENST00000618441 C17orf64Q86WR6 236 aa11.24□□□□□ -0.61
MATR3-227ENST00000618441 TMEM104Q8NE00 496 aa11.24□□□□□ -0.61
MATR3-227ENST00000618441 MITD1Q8WV92 249 aa11.24□□□□□ -0.61
MATR3-227ENST00000618441 OSTF1Q92882 214 aa11.24□□□□□ -0.61
MATR3-227ENST00000618441 MYADMQ96S97 322 aa11.24□□□□□ -0.61
MATR3-227ENST00000618441 PIMREGQ9BSJ6 248 aa11.24□□□□□ -0.61
MATR3-227ENST00000618441 ZCCHC3Q9NUD5 404 aaKnown RBP11.24□□□□□ -0.61
MATR3-227ENST00000618441 EDDM13A0A1B0GTR0 161 aa11.23□□□□□ -0.61
MATR3-227ENST00000618441 ANKRD20A5PA0PJZ0 165 aa11.23□□□□□ -0.61
MATR3-227ENST00000618441 NPIPB9F8W1W9 429 aa11.23□□□□□ -0.61
MATR3-227ENST00000618441 RNASET2O00584 256 aaKnown RBP11.23□□□□□ -0.61
MATR3-227ENST00000618441 ATXN7O15265 892 aaPredicted RBP11.23□□□□□ -0.61
MATR3-227ENST00000618441 CLDN11O75508 207 aa11.23□□□□□ -0.61
MATR3-227ENST00000618441 SLC2A1P11166 492 aa11.23□□□□□ -0.61
MATR3-227ENST00000618441 UQCRC2P22695 453 aa11.23□□□□□ -0.61
MATR3-227ENST00000618441 RPL4P36578 427 aaKnown RBP11.23□□□□□ -0.61
MATR3-227ENST00000618441 GAS1P54826 345 aa11.23□□□□□ -0.61
MATR3-227ENST00000618441 STARD6P59095 220 aa11.23□□□□□ -0.61
MATR3-227ENST00000618441 PGGHGQ32M88 737 aa11.23□□□□□ -0.61
MATR3-227ENST00000618441 KHDC3LQ587J8 217 aa11.23□□□□□ -0.61
MATR3-227ENST00000618441 Q6ZRG5 221 aa11.23□□□□□ -0.61
MATR3-227ENST00000618441 LIMS2Q7Z4I7 341 aa11.23□□□□□ -0.61
MATR3-227ENST00000618441 TMCO2Q7Z6W1 182 aaPredicted RBP11.23□□□□□ -0.61
MATR3-227ENST00000618441 LCORQ96JN0 433 aaPredicted RBP11.23□□□□□ -0.61
MATR3-227ENST00000618441 A4GNTQ9UNA3 340 aa11.23□□□□□ -0.61
MATR3-227ENST00000618441 URB1O60287 2271 aaKnown RBP11.23□□□□□ -0.61
MATR3-227ENST00000618441 TGOLN2O43493 480 aa11.23□□□□□ -0.61
MATR3-227ENST00000618441 PRAMEF11O60813 436 aa11.23□□□□□ -0.61
MATR3-227ENST00000618441 HOXC4P09017 264 aaPredicted RBP11.23□□□□□ -0.61
MATR3-227ENST00000618441 CD22P20273 847 aa11.23□□□□□ -0.61
MATR3-227ENST00000618441 CRABP1P29762 137 aa11.23□□□□□ -0.61
MATR3-227ENST00000618441 APLNRP35414 380 aa11.23□□□□□ -0.61
MATR3-227ENST00000618441 LIPJQ5W064 366 aa11.23□□□□□ -0.61
MATR3-227ENST00000618441 LRRC70Q7Z2Q7 622 aa11.23□□□□□ -0.61
MATR3-227ENST00000618441 CLP1Q92989 425 aaKnown RBP11.23□□□□□ -0.61
MATR3-227ENST00000618441 RIOK2Q9BVS4 552 aaKnown RBP11.23□□□□□ -0.61
MATR3-227ENST00000618441 OR14J1Q9UGF5 321 aa11.23□□□□□ -0.61
MATR3-227ENST00000618441 C9orf170A2RU37 121 aa11.23□□□□□ -0.61
MATR3-227ENST00000618441 PGPEP1LA6NFU8 196 aa11.23□□□□□ -0.61
MATR3-227ENST00000618441 CYC1P08574 325 aa11.23□□□□□ -0.61
MATR3-227ENST00000618441 JMJD7P0C870 316 aa11.23□□□□□ -0.61
MATR3-227ENST00000618441 HTR1FP30939 366 aa11.23□□□□□ -0.61
MATR3-227ENST00000618441 TGM3Q08188 693 aa11.23□□□□□ -0.61
MATR3-227ENST00000618441 TRA2AQ13595 282 aaKnown RBP eCLIP11.23□□□□□ -0.613e-14■■■□□ 18.7
MATR3-227ENST00000618441 ZNF343Q6P1L6 599 aa11.23□□□□□ -0.61
MATR3-227ENST00000618441 NIPAL3Q6P499 406 aa11.23□□□□□ -0.61
MATR3-227ENST00000618441 RANBP3LQ86VV4 465 aaPredicted RBP11.23□□□□□ -0.61
MATR3-227ENST00000618441 LRRC56Q8IYG6 542 aaPredicted RBP11.23□□□□□ -0.61
MATR3-227ENST00000618441 OR5AP2Q8NGF4 316 aa11.23□□□□□ -0.61
MATR3-227ENST00000618441 OR10J5Q8NHC4 309 aa11.23□□□□□ -0.61
MATR3-227ENST00000618441 RAB24Q969Q5 203 aa11.23□□□□□ -0.61
MATR3-227ENST00000618441 VOPP1Q96AW1 172 aa11.23□□□□□ -0.61
MATR3-227ENST00000618441 TCTN2Q96GX1 697 aa11.23□□□□□ -0.61
MATR3-227ENST00000618441 KATNBL1Q9H079 304 aa11.23□□□□□ -0.61
MATR3-227ENST00000618441 TNFSF18Q9UNG2 199 aa11.23□□□□□ -0.61
MATR3-227ENST00000618441 CYB5BO43169 146 aa11.22□□□□□ -0.61
MATR3-227ENST00000618441 EMC8O43402 210 aa11.22□□□□□ -0.61
MATR3-227ENST00000618441 POU2F2P09086 479 aa11.22□□□□□ -0.61
MATR3-227ENST00000618441 EPHB3P54753 998 aa11.22□□□□□ -0.61
MATR3-227ENST00000618441 GGNBP1Q5YKI7 109 aa11.22□□□□□ -0.61
MATR3-227ENST00000618441 MRM1Q6IN84 353 aaKnown RBP11.22□□□□□ -0.61
MATR3-227ENST00000618441 PACRGQ96M98 296 aaPredicted RBP11.22□□□□□ -0.61
MATR3-227ENST00000618441 LRFN5Q96NI6 719 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms