RNA–Protein interactions for RNA: ENST00000618395.4

COL5A1-208, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL5A1, Length 8,437 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-208ENST00000618395 KHSRPQ92945 711 aaKnown RBP eCLIP13.94□□□□□ -0.18
COL5A1-208ENST00000618395 AJAP1Q9UKB5 411 aaPredicted RBP13.94□□□□□ -0.18
COL5A1-208ENST00000618395 WASHC3Q9Y3C0 194 aa13.94□□□□□ -0.18
COL5A1-208ENST00000618395 ATRNL1Q5VV63 1379 aa13.94□□□□□ -0.18
COL5A1-208ENST00000618395 CPEP16870 476 aa13.94□□□□□ -0.18
COL5A1-208ENST00000618395 PI4KAP42356 2102 aa13.94□□□□□ -0.18
COL5A1-208ENST00000618395 RNASEKQ6P5S7 137 aaKnown RBP13.94□□□□□ -0.18
COL5A1-208ENST00000618395 TMEM81Q6P7N7 255 aa13.94□□□□□ -0.18
COL5A1-208ENST00000618395 LCN15Q6UWW0 184 aa13.94□□□□□ -0.18
COL5A1-208ENST00000618395 TMEM102Q8N9M5 508 aaPredicted RBP13.94□□□□□ -0.18
COL5A1-208ENST00000618395 ARSIQ5FYB1 569 aa13.94□□□□□ -0.18
COL5A1-208ENST00000618395 MANEALQ5VSG8 457 aa13.94□□□□□ -0.18
COL5A1-208ENST00000618395 SLC16A12Q6ZSM3 486 aa13.94□□□□□ -0.18
COL5A1-208ENST00000618395 GOLGA2P5Q9HBQ8 144 aa13.94□□□□□ -0.18
COL5A1-208ENST00000618395 MMP24Q9Y5R2 645 aa13.94□□□□□ -0.18
COL5A1-208ENST00000618395 ERCC6L2Q5T890 1561 aa13.94□□□□□ -0.18
COL5A1-208ENST00000618395 RIMS1Q86UR5 1692 aaKnown RBP13.94□□□□□ -0.18
COL5A1-208ENST00000618395 NXPH3O95157 252 aa13.94□□□□□ -0.18
COL5A1-208ENST00000618395 GJA4P35212 333 aa13.94□□□□□ -0.18
COL5A1-208ENST00000618395 DAPP51397 102 aa13.94□□□□□ -0.18
COL5A1-208ENST00000618395 NCMAPQ5T1S8 102 aa13.94□□□□□ -0.18
COL5A1-208ENST00000618395 NOX4Q9NPH5 578 aa13.94□□□□□ -0.18
COL5A1-208ENST00000618395 N4BP2Q86UW6 1770 aaPredicted RBP13.94□□□□□ -0.18
COL5A1-208ENST00000618395 MYOM1P52179 1685 aa13.94□□□□□ -0.18
COL5A1-208ENST00000618395 NACAE9PAV3 2078 aa13.94□□□□□ -0.18
COL5A1-208ENST00000618395 DDTLA6NHG4 134 aaPredicted RBP13.94□□□□□ -0.18
COL5A1-208ENST00000618395 POP7O75817 140 aaKnown RBP13.94□□□□□ -0.18
COL5A1-208ENST00000618395 ACRV1P26436 265 aa13.94□□□□□ -0.18
COL5A1-208ENST00000618395 ZP2Q05996 745 aa13.94□□□□□ -0.18
COL5A1-208ENST00000618395 BTNL3Q6UXE8 466 aa13.94□□□□□ -0.18
COL5A1-208ENST00000618395 LINC00469Q8N7U9 141 aa13.94□□□□□ -0.18
COL5A1-208ENST00000618395 WFIKKN1Q96NZ8 548 aa13.94□□□□□ -0.18
COL5A1-208ENST00000618395 GAGE10A6NGK3 116 aa13.94□□□□□ -0.18
COL5A1-208ENST00000618395 LIPAP38571 399 aa13.94□□□□□ -0.18
COL5A1-208ENST00000618395 TBPL1P62380 186 aa13.94□□□□□ -0.18
COL5A1-208ENST00000618395 NFATC2Q13469 925 aa13.94□□□□□ -0.18
COL5A1-208ENST00000618395 OR5L1Q8NGL2 311 aa13.94□□□□□ -0.18
COL5A1-208ENST00000618395 TMEM106AQ96A25 262 aa13.94□□□□□ -0.18
COL5A1-208ENST00000618395 RSG1Q9BU20 258 aa13.94□□□□□ -0.18
COL5A1-208ENST00000618395 UPK3BL1B0FP48 263 aa13.94□□□□□ -0.18
COL5A1-208ENST00000618395 UPK3BL2E5RIL1 263 aa13.94□□□□□ -0.18
COL5A1-208ENST00000618395 SOCS5O75159 536 aa13.94□□□□□ -0.18
COL5A1-208ENST00000618395 OPN1MWP04001 364 aa13.94□□□□□ -0.18
COL5A1-208ENST00000618395 FAM163BP0C2L3 166 aa13.94□□□□□ -0.18
COL5A1-208ENST00000618395 OPN1MW2P0DN77 364 aa13.94□□□□□ -0.18
COL5A1-208ENST00000618395 OPN1MW3P0DN78 364 aa13.94□□□□□ -0.18
COL5A1-208ENST00000618395 TAS2R45P59539 299 aa13.94□□□□□ -0.18
COL5A1-208ENST00000618395 MEF2AQ02078 507 aaPredicted RBP13.94□□□□□ -0.18
COL5A1-208ENST00000618395 OR8G1Q15617 311 aa13.94□□□□□ -0.18
COL5A1-208ENST00000618395 PHLDA2Q53GA4 152 aa13.94□□□□□ -0.18
COL5A1-208ENST00000618395 PODNL1Q6PEZ8 512 aa13.94□□□□□ -0.18
COL5A1-208ENST00000618395 UBE3DQ7Z6J8 389 aa13.94□□□□□ -0.18
COL5A1-208ENST00000618395 DND1Q8IYX4 353 aaKnown RBP13.94□□□□□ -0.18
COL5A1-208ENST00000618395 ARRDC2Q8TBH0 407 aa13.94□□□□□ -0.18
COL5A1-208ENST00000618395 CD200R1Q8TD46 325 aa13.94□□□□□ -0.18
COL5A1-208ENST00000618395 SNX22Q96L94 193 aa13.94□□□□□ -0.18
COL5A1-208ENST00000618395 PEBP4Q96S96 227 aa13.94□□□□□ -0.18
COL5A1-208ENST00000618395 HRH2P25021 359 aa13.93□□□□□ -0.18
COL5A1-208ENST00000618395 SUCLG1P53597 346 aaKnown RBP13.93□□□□□ -0.18
COL5A1-208ENST00000618395 ELOCQ15369 112 aa13.93□□□□□ -0.18
COL5A1-208ENST00000618395 RNF111Q6ZNA4 994 aa13.93□□□□□ -0.18
COL5A1-208ENST00000618395 CELF5Q8N6W0 485 aaKnown RBP13.93□□□□□ -0.18
COL5A1-208ENST00000618395 DMAC2Q9NW81 257 aa13.93□□□□□ -0.18
COL5A1-208ENST00000618395 LOC102725191A0A1B0GVB3 256 aa13.93□□□□□ -0.18
COL5A1-208ENST00000618395 CLDN34H7C241 214 aa13.93□□□□□ -0.18
COL5A1-208ENST00000618395 GPR37L1O60883 481 aa13.93□□□□□ -0.18
COL5A1-208ENST00000618395 CXCL14O95715 111 aa13.93□□□□□ -0.18
COL5A1-208ENST00000618395 ERVPABLB-1P60509 514 aa13.93□□□□□ -0.18
COL5A1-208ENST00000618395 PRAMEF8Q5VWM4 474 aa13.93□□□□□ -0.18
COL5A1-208ENST00000618395 PRAMEF7Q5VXH5 474 aa13.93□□□□□ -0.18
COL5A1-208ENST00000618395 TDRD6O60522 2096 aaKnown RBP13.93□□□□□ -0.18
COL5A1-208ENST00000618395 TRAPPC2LH3BP13 241 aa13.93□□□□□ -0.18
COL5A1-208ENST00000618395 OR5AL1P0C617 328 aa13.93□□□□□ -0.18
COL5A1-208ENST00000618395 DHRS4L2Q6PKH6 230 aa13.93□□□□□ -0.18
COL5A1-208ENST00000618395 PRSS45Q7RTY3 260 aa13.93□□□□□ -0.18
COL5A1-208ENST00000618395 OR2A1Q8NGT9 310 aa13.93□□□□□ -0.18
COL5A1-208ENST00000618395 APOBEC3GQ9HC16 384 aaKnown RBP13.93□□□□□ -0.18
COL5A1-208ENST00000618395 AKIP1Q9NQ31 210 aa13.93□□□□□ -0.18
COL5A1-208ENST00000618395 ZNF256Q9Y2P7 627 aaPredicted RBP13.93□□□□□ -0.18
COL5A1-208ENST00000618395 SCO2O43819 266 aa13.93□□□□□ -0.18
COL5A1-208ENST00000618395 ITGB5P18084 799 aa13.93□□□□□ -0.18
COL5A1-208ENST00000618395 IL2RGP31785 369 aa13.93□□□□□ -0.18
COL5A1-208ENST00000618395 OPRD1P41143 372 aa13.93□□□□□ -0.18
COL5A1-208ENST00000618395 CSN1S1P47710 185 aa13.93□□□□□ -0.18
COL5A1-208ENST00000618395 GNG10P50151 68 aa13.93□□□□□ -0.18
COL5A1-208ENST00000618395 DMWDQ09019 674 aa13.93□□□□□ -0.18
COL5A1-208ENST00000618395 OR2B11Q5JQS5 317 aa13.93□□□□□ -0.18
COL5A1-208ENST00000618395 THNSL2Q86YJ6 484 aa13.93□□□□□ -0.18
COL5A1-208ENST00000618395 STARD4Q96DR4 205 aa13.93□□□□□ -0.18
COL5A1-208ENST00000618395 PRTFDC1Q9NRG1 225 aa13.93□□□□□ -0.18
COL5A1-208ENST00000618395 SMIM28A0A1B0GU29 152 aa13.93□□□□□ -0.18
COL5A1-208ENST00000618395 A0A1W2PPH5 198 aa13.93□□□□□ -0.18
COL5A1-208ENST00000618395 NCBP2LA6PVI3 153 aaKnown RBP13.93□□□□□ -0.18
COL5A1-208ENST00000618395 NUDT21O43809 227 aaKnown RBP13.93□□□□□ -0.18
COL5A1-208ENST00000618395 TBPP20226 339 aa13.93□□□□□ -0.18
COL5A1-208ENST00000618395 ARRB2P32121 409 aa13.93□□□□□ -0.18
COL5A1-208ENST00000618395 SLC10A2Q12908 348 aaPredicted RBP13.93□□□□□ -0.18
COL5A1-208ENST00000618395 Q499Y3 187 aa13.93□□□□□ -0.18
COL5A1-208ENST00000618395 OR4C11Q6IEV9 310 aa13.93□□□□□ -0.18
COL5A1-208ENST00000618395 FAM131CQ96AQ9 280 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms