RNA–Protein interactions for RNA: ENST00000618327.4

CIITA-213, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CIITA, Length 4,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-213ENST00000618327 MRPL15Q9P015 296 aaKnown RBP12.66□□□□□ -0.38
CIITA-213ENST00000618327 TMEM129A0AVI4 362 aa12.66□□□□□ -0.38
CIITA-213ENST00000618327 MECP2P51608 486 aaKnown RBP12.66□□□□□ -0.38
CIITA-213ENST00000618327 EMP3P54852 163 aa12.66□□□□□ -0.38
CIITA-213ENST00000618327 ACKR1Q16570 336 aa12.66□□□□□ -0.38
CIITA-213ENST00000618327 C9orf135Q5VTT2 229 aa12.66□□□□□ -0.38
CIITA-213ENST00000618327 SLC16A14Q7RTX9 510 aa12.66□□□□□ -0.38
CIITA-213ENST00000618327 OR6Q1Q8NGQ2 317 aa12.66□□□□□ -0.38
CIITA-213ENST00000618327 C7orf50Q9BRJ6 194 aaKnown RBP12.66□□□□□ -0.38
CIITA-213ENST00000618327 ZNF768Q9H5H4 540 aaKnown RBP12.66□□□□□ -0.38
CIITA-213ENST00000618327 TXNL4BQ9NX01 149 aaKnown RBP12.66□□□□□ -0.38
CIITA-213ENST00000618327 NINQ8N4C6 2090 aa12.66□□□□□ -0.38
CIITA-213ENST00000618327 FAM166BA8MTA8 275 aa12.65□□□□□ -0.38
CIITA-213ENST00000618327 F8W036 122 aa12.65□□□□□ -0.38
CIITA-213ENST00000618327 GPR171O14626 319 aa12.65□□□□□ -0.38
CIITA-213ENST00000618327 SLC2A5P22732 501 aa12.65□□□□□ -0.38
CIITA-213ENST00000618327 BLOC1S1P78537 153 aa12.65□□□□□ -0.38
CIITA-213ENST00000618327 MEP1BQ16820 701 aa12.65□□□□□ -0.38
CIITA-213ENST00000618327 LINC00346Q8IVM7 164 aa12.65□□□□□ -0.38
CIITA-213ENST00000618327 SCGB1C1Q8TD33 95 aa12.65□□□□□ -0.38
CIITA-213ENST00000618327 SNAPC3Q92966 411 aa12.65□□□□□ -0.38
CIITA-213ENST00000618327 MRGPRX4Q96LA9 322 aa12.65□□□□□ -0.38
CIITA-213ENST00000618327 TAS2R8Q9NYW2 309 aa12.65□□□□□ -0.38
CIITA-213ENST00000618327 KLHL13Q9P2N7 655 aa12.65□□□□□ -0.38
CIITA-213ENST00000618327 FBXO4Q9UKT5 387 aa12.65□□□□□ -0.38
CIITA-213ENST00000618327 AHCTF1Q8WYP5 2266 aa12.65□□□□□ -0.38
CIITA-213ENST00000618327 TRAV18A0A075B6X5 111 aa12.65□□□□□ -0.38
CIITA-213ENST00000618327 A0A1W2PNR3 127 aa12.65□□□□□ -0.38
CIITA-213ENST00000618327 TMEM212A6NML5 194 aa12.65□□□□□ -0.38
CIITA-213ENST00000618327 CTDSP2O14595 271 aa12.65□□□□□ -0.38
CIITA-213ENST00000618327 NOVA1P51513 510 aaKnown RBP12.65□□□□□ -0.38
CIITA-213ENST00000618327 HSF1Q00613 529 aa12.65□□□□□ -0.38
CIITA-213ENST00000618327 LRFN5Q96NI6 719 aa12.65□□□□□ -0.38
CIITA-213ENST00000618327 CDCA4Q9BXL8 241 aa12.65□□□□□ -0.38
CIITA-213ENST00000618327 OSGIN1Q9UJX0 560 aa12.65□□□□□ -0.38
CIITA-213ENST00000618327 HIF3AQ9Y2N7 669 aa12.65□□□□□ -0.38
CIITA-213ENST00000618327 A0A0B4J2E0 115 aa12.65□□□□□ -0.38
CIITA-213ENST00000618327 A0A1B0GX12 115 aa12.65□□□□□ -0.38
CIITA-213ENST00000618327 ZC3H12DA2A288 527 aaKnown RBP12.65□□□□□ -0.38
CIITA-213ENST00000618327 ARPC5O15511 151 aa12.65□□□□□ -0.38
CIITA-213ENST00000618327 LUMP51884 338 aaPredicted RBP12.65□□□□□ -0.38
CIITA-213ENST00000618327 CDNFQ49AH0 187 aa12.65□□□□□ -0.38
CIITA-213ENST00000618327 EMC4Q5J8M3 183 aa12.65□□□□□ -0.38
CIITA-213ENST00000618327 SLC16A9Q7RTY1 509 aa12.65□□□□□ -0.38
CIITA-213ENST00000618327 MRPL21Q7Z2W9 205 aaKnown RBP12.65□□□□□ -0.38
CIITA-213ENST00000618327 ARIH2OSQ8N7S6 290 aa12.65□□□□□ -0.38
CIITA-213ENST00000618327 DCBLD2Q96PD2 775 aa12.65□□□□□ -0.38
CIITA-213ENST00000618327 EMC6Q9BV81 110 aa12.65□□□□□ -0.38
CIITA-213ENST00000618327 ZNF701Q9NV72 531 aaPredicted RBP12.65□□□□□ -0.38
CIITA-213ENST00000618327 A0A087WUJ7 227 aa12.65□□□□□ -0.38
CIITA-213ENST00000618327 ACOD1A6NK06 481 aa12.65□□□□□ -0.38
CIITA-213ENST00000618327 EEF1E1-BLOC1S5C9J1V9 151 aa12.65□□□□□ -0.38
CIITA-213ENST00000618327 SURF4O15260 269 aa12.65□□□□□ -0.38
CIITA-213ENST00000618327 BPNT1O95861 308 aa12.65□□□□□ -0.38
CIITA-213ENST00000618327 CD3GP09693 182 aa12.65□□□□□ -0.38
CIITA-213ENST00000618327 ETV5P41161 510 aa12.65□□□□□ -0.38
CIITA-213ENST00000618327 ETV1P50549 477 aa12.65□□□□□ -0.38
CIITA-213ENST00000618327 HMGA2P52926 109 aa12.65□□□□□ -0.38
CIITA-213ENST00000618327 RSU1Q15404 277 aa12.65□□□□□ -0.38
CIITA-213ENST00000618327 OCIAD1Q9NX40 245 aa12.65□□□□□ -0.38
CIITA-213ENST00000618327 ZNF346Q9UL40 294 aaKnown RBP12.65□□□□□ -0.38
CIITA-213ENST00000618327 A6NLC8 198 aa12.64□□□□□ -0.39
CIITA-213ENST00000618327 STMND1H3BQB6 276 aa12.64□□□□□ -0.39
CIITA-213ENST00000618327 NUPL2O15504 423 aaKnown RBP12.64□□□□□ -0.39
CIITA-213ENST00000618327 VAMP5O95183 116 aa12.64□□□□□ -0.39
CIITA-213ENST00000618327 SUMO3P55854 103 aaPredicted RBP12.64□□□□□ -0.39
CIITA-213ENST00000618327 ZSCAN4Q8NAM6 433 aaPredicted RBP12.64□□□□□ -0.39
CIITA-213ENST00000618327 ABHD4Q8TB40 342 aa12.64□□□□□ -0.39
CIITA-213ENST00000618327 LRRC46Q96FV0 321 aa12.64□□□□□ -0.39
CIITA-213ENST00000618327 ZNF681Q96N22 645 aa12.64□□□□□ -0.39
CIITA-213ENST00000618327 VSX1Q9NZR4 365 aaPredicted RBP12.64□□□□□ -0.39
CIITA-213ENST00000618327 COA3Q9Y2R0 106 aaPredicted RBP12.64□□□□□ -0.39
CIITA-213ENST00000618327 TMEM184BQ9Y519 407 aaPredicted RBP12.64□□□□□ -0.39
CIITA-213ENST00000618327 SPI1P17947 270 aa12.64□□□□□ -0.39
CIITA-213ENST00000618327 CAV3P56539 151 aa12.64□□□□□ -0.39
CIITA-213ENST00000618327 GPR50Q13585 617 aa12.64□□□□□ -0.39
CIITA-213ENST00000618327 LIX1LQ8IVB5 337 aa12.64□□□□□ -0.39
CIITA-213ENST00000618327 TCTEX1D2Q8WW35 142 aa12.64□□□□□ -0.39
CIITA-213ENST00000618327 PBDC1Q9BVG4 233 aa12.64□□□□□ -0.39
CIITA-213ENST00000618327 SARGQ9BW04 601 aa12.64□□□□□ -0.39
CIITA-213ENST00000618327 DNAJB12Q9NXW2 375 aaKnown RBP12.64□□□□□ -0.39
CIITA-213ENST00000618327 MYEF2Q9P2K5 600 aaKnown RBP12.64□□□□□ -0.39
CIITA-213ENST00000618327 FNDC1Q4ZHG4 1894 aaPredicted RBP12.64□□□□□ -0.39
CIITA-213ENST00000618327 RAD51DO75771 328 aa12.64□□□□□ -0.39
CIITA-213ENST00000618327 ZNF16P17020 682 aaPredicted RBP12.64□□□□□ -0.39
CIITA-213ENST00000618327 GNRHRP30968 328 aa12.64□□□□□ -0.39
CIITA-213ENST00000618327 TNFSF8P32971 234 aa12.64□□□□□ -0.39
CIITA-213ENST00000618327 AGAP6Q5VW22 663 aa12.64□□□□□ -0.39
CIITA-213ENST00000618327 TMEM205Q6UW68 189 aa12.64□□□□□ -0.39
CIITA-213ENST00000618327 BORCS8Q96FH0 119 aa12.64□□□□□ -0.39
CIITA-213ENST00000618327 AGAP4Q96P64 663 aa12.64□□□□□ -0.39
CIITA-213ENST00000618327 OR5B12Q96R08 314 aa12.64□□□□□ -0.39
CIITA-213ENST00000618327 PLA2G12AQ9BZM1 189 aa12.64□□□□□ -0.39
CIITA-213ENST00000618327 MMP28Q9H239 520 aa12.64□□□□□ -0.39
CIITA-213ENST00000618327 UNKLQ9H9P5 680 aaKnown RBP12.64□□□□□ -0.39
CIITA-213ENST00000618327 CALHM2Q9HA72 323 aa12.64□□□□□ -0.39
CIITA-213ENST00000618327 KLHL9Q9P2J3 617 aa12.64□□□□□ -0.39
CIITA-213ENST00000618327 FOXS1O43638 330 aa12.64□□□□□ -0.39
CIITA-213ENST00000618327 PTH2RP49190 550 aa12.64□□□□□ -0.39
CIITA-213ENST00000618327 STK11Q15831 433 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms