RNA–Protein interactions for RNA: ENST00000618056.4

PMS1-220, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-220ENST00000618056 PODNL1Q6PEZ8 512 aa21.65■■□□□ 1.06
PMS1-220ENST00000618056 KCNS3Q9BQ31 491 aa21.65■■□□□ 1.06
PMS1-220ENST00000618056 TMEM5Q9Y2B1 443 aa21.65■■□□□ 1.06
PMS1-220ENST00000618056 ATP23Q9Y6H3 246 aa21.65■■□□□ 1.06
PMS1-220ENST00000618056 V9GYQ6 96 aa21.65■■□□□ 1.06
PMS1-220ENST00000618056 TRMUO75648 421 aaKnown RBP21.64■■□□□ 1.06
PMS1-220ENST00000618056 QDPRP09417 244 aa21.64■■□□□ 1.06
PMS1-220ENST00000618056 ZNF133P52736 654 aaPredicted RBP21.64■■□□□ 1.06
PMS1-220ENST00000618056 NAAAQ02083 359 aa21.64■■□□□ 1.06
PMS1-220ENST00000618056 MDP1Q86V88 176 aa21.64■■□□□ 1.06
PMS1-220ENST00000618056 MEX3DQ86XN8 651 aaKnown RBP21.64■■□□□ 1.06
PMS1-220ENST00000618056 LRRC75AQ8NAA5 344 aa21.64■■□□□ 1.06
PMS1-220ENST00000618056 DENND2DQ9H6A0 471 aaPredicted RBP21.64■■□□□ 1.06
PMS1-220ENST00000618056 DLL4Q9NR61 685 aa21.64■■□□□ 1.06
PMS1-220ENST00000618056 ACTR3BQ9P1U1 418 aa21.64■■□□□ 1.06
PMS1-220ENST00000618056 TRAV27A0A087WT01 109 aa21.64■■□□□ 1.05
PMS1-220ENST00000618056 CDC42EP2O14613 210 aa21.64■■□□□ 1.05
PMS1-220ENST00000618056 ENTPD5O75356 428 aa21.64■■□□□ 1.05
PMS1-220ENST00000618056 DIRAS1O95057 198 aa21.64■■□□□ 1.05
PMS1-220ENST00000618056 HLA-HP01893 362 aa21.64■■□□□ 1.05
PMS1-220ENST00000618056 CAPZA2P47755 286 aa21.64■■□□□ 1.05
PMS1-220ENST00000618056 FBXL14Q8N1E6 418 aa21.64■■□□□ 1.05
PMS1-220ENST00000618056 MUC15Q8N387 334 aa21.64■■□□□ 1.05
PMS1-220ENST00000618056 OR51A7Q8NH64 312 aa21.64■■□□□ 1.05
PMS1-220ENST00000618056 NANOS1Q8WY41 292 aaKnown RBP21.64■■□□□ 1.05
PMS1-220ENST00000618056 MCHR2Q969V1 340 aa21.64■■□□□ 1.05
PMS1-220ENST00000618056 GTPBP3Q969Y2 492 aaKnown RBP21.64■■□□□ 1.05
PMS1-220ENST00000618056 TNFRSF13CQ96RJ3 184 aa21.64■■□□□ 1.05
PMS1-220ENST00000618056 ZNF347Q96SE7 839 aa21.64■■□□□ 1.05
PMS1-220ENST00000618056 FUZQ9BT04 418 aa21.64■■□□□ 1.05
PMS1-220ENST00000618056 C1orf21Q9H246 121 aa21.64■■□□□ 1.05
PMS1-220ENST00000618056 TMEM38BQ9NVV0 291 aa21.64■■□□□ 1.05
PMS1-220ENST00000618056 ZNF224Q9NZL3 707 aa21.64■■□□□ 1.05
PMS1-220ENST00000618056 ZANQ9Y493 2812 aa21.63■■□□□ 1.05
PMS1-220ENST00000618056 TRBV4-1A0A0J9YWV2 114 aa21.63■■□□□ 1.05
PMS1-220ENST00000618056 GPR4P46093 362 aa21.63■■□□□ 1.05
PMS1-220ENST00000618056 FABP6P51161 128 aa21.63■■□□□ 1.05
PMS1-220ENST00000618056 IDH3GP51553 393 aaPredicted RBP21.63■■□□□ 1.05
PMS1-220ENST00000618056 ATP5J2P56134 94 aa21.63■■□□□ 1.05
PMS1-220ENST00000618056 RPL27P61353 136 aaKnown RBP21.63■■□□□ 1.05
PMS1-220ENST00000618056 GSG1Q2KHT4 349 aa21.63■■□□□ 1.05
PMS1-220ENST00000618056 NRN1LQ496H8 165 aa21.63■■□□□ 1.05
PMS1-220ENST00000618056 MTX3Q5HYI7 312 aa21.63■■□□□ 1.05
PMS1-220ENST00000618056 FGD3Q5JSP0 725 aa21.63■■□□□ 1.05
PMS1-220ENST00000618056 C11orf71Q6IPW1 123 aa21.63■■□□□ 1.05
PMS1-220ENST00000618056 RINLQ6ZS11 566 aa21.63■■□□□ 1.05
PMS1-220ENST00000618056 MYPOPQ86VE0 399 aaPredicted RBP21.63■■□□□ 1.05
PMS1-220ENST00000618056 IL17RDQ8NFM7 739 aa21.63■■□□□ 1.05
PMS1-220ENST00000618056 OR13C2Q8NGS9 318 aa21.63■■□□□ 1.05
PMS1-220ENST00000618056 MCUR1Q96AQ8 359 aa21.63■■□□□ 1.05
PMS1-220ENST00000618056 TRMT61AQ96FX7 289 aaKnown RBP21.63■■□□□ 1.05
PMS1-220ENST00000618056 MUC13Q9H3R2 512 aa21.63■■□□□ 1.05
PMS1-220ENST00000618056 SEC61A2Q9H9S3 476 aa21.63■■□□□ 1.05
PMS1-220ENST00000618056 IL1RAPQ9NPH3 570 aa21.63■■□□□ 1.05
PMS1-220ENST00000618056 CBLN4Q9NTU7 201 aa21.63■■□□□ 1.05
PMS1-220ENST00000618056 SETD2Q9BYW2 2564 aaPredicted RBP21.63■■□□□ 1.05
PMS1-220ENST00000618056 CELA3BP08861 270 aa21.62■■□□□ 1.05
PMS1-220ENST00000618056 FOSL1P15407 271 aa21.62■■□□□ 1.05
PMS1-220ENST00000618056 APOBEC3AP31941 199 aaPredicted RBP21.62■■□□□ 1.05
PMS1-220ENST00000618056 CDKN1AP38936 164 aa21.62■■□□□ 1.05
PMS1-220ENST00000618056 SMIM11AP58511 58 aa21.62■■□□□ 1.05
PMS1-220ENST00000618056 CTXN1P60606 82 aa21.62■■□□□ 1.05
PMS1-220ENST00000618056 BNIP1Q12981 228 aa21.62■■□□□ 1.05
PMS1-220ENST00000618056 C10orf128Q5T292 105 aa21.62■■□□□ 1.05
PMS1-220ENST00000618056 FAM205BPQ63HN1 556 aa21.62■■□□□ 1.05
PMS1-220ENST00000618056 SLC22A24Q8N4F4 322 aa21.62■■□□□ 1.05
PMS1-220ENST00000618056 SYT14Q8NB59 555 aa21.62■■□□□ 1.05
PMS1-220ENST00000618056 HDAC2Q92769 488 aaKnown RBP21.62■■□□□ 1.05
PMS1-220ENST00000618056 NMD3Q96D46 503 aaKnown RBP21.62■■□□□ 1.05
PMS1-220ENST00000618056 ZNF75AQ96N20 296 aa21.62■■□□□ 1.05
PMS1-220ENST00000618056 KCNK17Q96T54 332 aa21.62■■□□□ 1.05
PMS1-220ENST00000618056 ALG12Q9BV10 488 aa21.62■■□□□ 1.05
PMS1-220ENST00000618056 SMURF2Q9HAU4 748 aa21.62■■□□□ 1.05
PMS1-220ENST00000618056 PRPF19Q9UMS4 504 aaKnown RBP21.62■■□□□ 1.05
PMS1-220ENST00000618056 FABP3P05413 133 aa21.61■■□□□ 1.05
PMS1-220ENST00000618056 OR8G3PP0DMU2 310 aa21.61■■□□□ 1.05
PMS1-220ENST00000618056 CD79AP11912 226 aa21.61■■□□□ 1.05
PMS1-220ENST00000618056 NR2C1P13056 603 aa21.61■■□□□ 1.05
PMS1-220ENST00000618056 ATP6V1B2P21281 511 aa21.61■■□□□ 1.05
PMS1-220ENST00000618056 CALCRP30988 508 aa21.61■■□□□ 1.05
PMS1-220ENST00000618056 OMPP47874 163 aa21.61■■□□□ 1.05
PMS1-220ENST00000618056 LIMS1P48059 325 aa21.61■■□□□ 1.05
PMS1-220ENST00000618056 SEC23BQ15437 767 aa21.61■■□□□ 1.05
PMS1-220ENST00000618056 ZBED5Q49AG3 693 aa21.61■■□□□ 1.05
PMS1-220ENST00000618056 SKA3Q8IX90 412 aa21.61■■□□□ 1.05
PMS1-220ENST00000618056 OR4F15Q8NGB8 312 aa21.61■■□□□ 1.05
PMS1-220ENST00000618056 OR4K5Q8NGD3 323 aa21.61■■□□□ 1.05
PMS1-220ENST00000618056 FAM46AQ96IP4 442 aaKnown RBP21.61■■□□□ 1.05
PMS1-220ENST00000618056 NOX3Q9HBY0 568 aa21.61■■□□□ 1.05
PMS1-220ENST00000618056 TAS2R1Q9NYW7 299 aa21.61■■□□□ 1.05
PMS1-220ENST00000618056 ZNF346Q9UL40 294 aaKnown RBP21.61■■□□□ 1.05
PMS1-220ENST00000618056 DNAJC8O75937 253 aaPredicted RBP21.6■■□□□ 1.05
PMS1-220ENST00000618056 UBL3O95164 117 aa21.6■■□□□ 1.05
PMS1-220ENST00000618056 ZNF84P51523 738 aa21.6■■□□□ 1.05
PMS1-220ENST00000618056 MYBPC1Q00872 1141 aa21.6■■□□□ 1.05
PMS1-220ENST00000618056 NPRL3Q12980 569 aa21.6■■□□□ 1.05
PMS1-220ENST00000618056 TRIM25Q14258 630 aaKnown RBP21.6■■□□□ 1.05
PMS1-220ENST00000618056 ETFDHQ16134 617 aa21.6■■□□□ 1.05
PMS1-220ENST00000618056 IGFN1Q86VF2 1251 aa21.6■■□□□ 1.05
PMS1-220ENST00000618056 ZNF519Q8TB69 540 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms