RNA–Protein interactions for RNA: ENST00000616247.4

LMO3-235, Transcript of LIM domain only 3, humanhuman

TSL 5 BASIC

Gene LMO3, Length 3,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-235ENST00000616247 LRRC69Q6ZNQ3 347 aa6.09□□□□□ -1.43
LMO3-235ENST00000616247 KCNRGQ8N5I3 272 aa6.09□□□□□ -1.43
LMO3-235ENST00000616247 EIF4E3Q8N5X7 224 aaKnown RBP6.09□□□□□ -1.43
LMO3-235ENST00000616247 EID2Q8N6I1 236 aa6.09□□□□□ -1.43
LMO3-235ENST00000616247 WDSUB1Q8N9V3 476 aa6.09□□□□□ -1.43
LMO3-235ENST00000616247 TEX19Q8NA77 164 aa6.09□□□□□ -1.43
LMO3-235ENST00000616247 CD300LFQ8TDQ1 290 aa6.09□□□□□ -1.43
LMO3-235ENST00000616247 S100PBPQ96BU1 408 aa6.09□□□□□ -1.43
LMO3-235ENST00000616247 FOXRED1Q96CU9 486 aaPredicted RBP6.09□□□□□ -1.43
LMO3-235ENST00000616247 CLCC1Q96S66 551 aa6.09□□□□□ -1.43
LMO3-235ENST00000616247 ALG12Q9BV10 488 aa6.09□□□□□ -1.43
LMO3-235ENST00000616247 JAM3Q9BX67 310 aa6.09□□□□□ -1.43
LMO3-235ENST00000616247 SMIM3Q9BZL3 60 aa6.09□□□□□ -1.43
LMO3-235ENST00000616247 PCBD2Q9H0N5 130 aa6.09□□□□□ -1.43
LMO3-235ENST00000616247 OR52A5Q9H2C5 316 aa6.09□□□□□ -1.43
LMO3-235ENST00000616247 DPEP2Q9H4A9 486 aa6.09□□□□□ -1.43
LMO3-235ENST00000616247 PLEKHA1Q9HB21 404 aa6.09□□□□□ -1.43
LMO3-235ENST00000616247 IL21Q9HBE4 155 aa6.09□□□□□ -1.43
LMO3-235ENST00000616247 PRR13Q9NZ81 148 aa6.09□□□□□ -1.43
LMO3-235ENST00000616247 STEAP1Q9UHE8 339 aa6.09□□□□□ -1.43
LMO3-235ENST00000616247 DPP7Q9UHL4 492 aa6.09□□□□□ -1.43
LMO3-235ENST00000616247 CSAG2Q9Y5P2 127 aa6.09□□□□□ -1.43
LMO3-235ENST00000616247 XIRP2A4UGR9 3374 aa6.09□□□□□ -1.44
LMO3-235ENST00000616247 CASP8AP2Q9UKL3 1982 aa6.08□□□□□ -1.44
LMO3-235ENST00000616247 A0A0A6YYC8 382 aaPredicted RBP6.08□□□□□ -1.44
LMO3-235ENST00000616247 I3L1I5 382 aaPredicted RBP6.08□□□□□ -1.44
LMO3-235ENST00000616247 NRG2O14511 850 aaPredicted RBP6.08□□□□□ -1.44
LMO3-235ENST00000616247 KLF4O43474 513 aa6.08□□□□□ -1.44
LMO3-235ENST00000616247 OR10H2O60403 315 aa6.08□□□□□ -1.44
LMO3-235ENST00000616247 MED6O75586 246 aa6.08□□□□□ -1.44
LMO3-235ENST00000616247 OR2F2O95006 317 aa6.08□□□□□ -1.44
LMO3-235ENST00000616247 DBIP07108 87 aaKnown RBP6.08□□□□□ -1.44
LMO3-235ENST00000616247 C8AP07357 584 aa6.08□□□□□ -1.44
LMO3-235ENST00000616247 ZNF888P0CJ79 500 aaPredicted RBP6.08□□□□□ -1.44
LMO3-235ENST00000616247 CTSAP10619 480 aa6.08□□□□□ -1.44
LMO3-235ENST00000616247 SELPP16109 830 aa6.08□□□□□ -1.44
LMO3-235ENST00000616247 SPI1P17947 270 aa6.08□□□□□ -1.44
LMO3-235ENST00000616247 PI3P19957 117 aa6.08□□□□□ -1.44
LMO3-235ENST00000616247 RAB6AP20340 208 aa6.08□□□□□ -1.44
LMO3-235ENST00000616247 CALCRP30988 508 aa6.08□□□□□ -1.44
LMO3-235ENST00000616247 OR2F1Q13607 317 aa6.08□□□□□ -1.44
LMO3-235ENST00000616247 CSRP2Q16527 193 aa6.08□□□□□ -1.44
LMO3-235ENST00000616247 GFOD2Q3B7J2 385 aa6.08□□□□□ -1.44
LMO3-235ENST00000616247 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.08□□□□□ -1.44
LMO3-235ENST00000616247 SLC29A4Q7RTT9 530 aa6.08□□□□□ -1.44
LMO3-235ENST00000616247 ADIPOR2Q86V24 386 aa6.08□□□□□ -1.44
LMO3-235ENST00000616247 ZNF584Q8IVC4 421 aa6.08□□□□□ -1.44
LMO3-235ENST00000616247 ZNF619Q8N2I2 560 aa6.08□□□□□ -1.44
LMO3-235ENST00000616247 CAMKVQ8NCB2 501 aa6.08□□□□□ -1.44
LMO3-235ENST00000616247 OR2L5Q8NG80 312 aa6.08□□□□□ -1.44
LMO3-235ENST00000616247 OR5K2Q8NHB8 316 aa6.08□□□□□ -1.44
LMO3-235ENST00000616247 SFXN5Q8TD22 340 aa6.08□□□□□ -1.44
LMO3-235ENST00000616247 PPP1R14AQ96A00 147 aa6.08□□□□□ -1.44
LMO3-235ENST00000616247 FAM3DQ96BQ1 224 aa6.08□□□□□ -1.44
LMO3-235ENST00000616247 C19orf43Q9BQ61 176 aa6.08□□□□□ -1.44
LMO3-235ENST00000616247 ZNF251Q9BRH9 671 aa6.08□□□□□ -1.44
LMO3-235ENST00000616247 VN1R3Q9BXE9 311 aa6.08□□□□□ -1.44
LMO3-235ENST00000616247 HOXA2O43364 376 aa6.08□□□□□ -1.44
LMO3-235ENST00000616247 XRCC3O43542 346 aa6.08□□□□□ -1.44
LMO3-235ENST00000616247 FOSL1P15407 271 aa6.08□□□□□ -1.44
LMO3-235ENST00000616247 NME1P15531 152 aaKnown RBP6.08□□□□□ -1.44
LMO3-235ENST00000616247 MAPK3P27361 379 aaPredicted RBP6.08□□□□□ -1.44
LMO3-235ENST00000616247 FRKP42685 505 aaPredicted RBP6.08□□□□□ -1.44
LMO3-235ENST00000616247 ACTBP60709 375 aa6.08□□□□□ -1.44
LMO3-235ENST00000616247 ACTG1P63261 375 aa6.08□□□□□ -1.44
LMO3-235ENST00000616247 SPOCK1Q08629 439 aa6.08□□□□□ -1.44
LMO3-235ENST00000616247 RIPPLY1Q0D2K3 151 aa6.08□□□□□ -1.44
LMO3-235ENST00000616247 ILF3Q12906 894 aaKnown RBP eCLIP6.08□□□□□ -1.44
LMO3-235ENST00000616247 SLC9A3R2Q15599 337 aa6.08□□□□□ -1.44
LMO3-235ENST00000616247 TSC22D1Q15714 1073 aa6.08□□□□□ -1.44
LMO3-235ENST00000616247 ZNF704Q6ZNC4 412 aaPredicted RBP6.08□□□□□ -1.44
LMO3-235ENST00000616247 TTLL10Q6ZVT0 673 aa6.08□□□□□ -1.44
LMO3-235ENST00000616247 ZAR1Q86SH2 424 aa6.08□□□□□ -1.44
LMO3-235ENST00000616247 OR4K17Q8NGC6 315 aa6.08□□□□□ -1.44
LMO3-235ENST00000616247 RNF141Q8WVD5 230 aa6.08□□□□□ -1.44
LMO3-235ENST00000616247 FGF13Q92913 245 aa6.08□□□□□ -1.44
LMO3-235ENST00000616247 AKR1E2Q96JD6 320 aa6.08□□□□□ -1.44
LMO3-235ENST00000616247 INSM2Q96T92 566 aaPredicted RBP6.08□□□□□ -1.44
LMO3-235ENST00000616247 SULT4A1Q9BR01 284 aa6.08□□□□□ -1.44
LMO3-235ENST00000616247 PITHD1Q9GZP4 211 aaPredicted RBP6.08□□□□□ -1.44
LMO3-235ENST00000616247 METTL8Q9H825 291 aaKnown RBP6.08□□□□□ -1.44
LMO3-235ENST00000616247 CHMP1AQ9HD42 196 aaPredicted RBP6.08□□□□□ -1.44
LMO3-235ENST00000616247 PRDM7Q9NQW5 492 aa6.08□□□□□ -1.44
LMO3-235ENST00000616247 SPHK2Q9NRA0 654 aa6.08□□□□□ -1.44
LMO3-235ENST00000616247 UQCC1Q9NVA1 299 aa6.08□□□□□ -1.44
LMO3-235ENST00000616247 APOBEC3BQ9UH17 382 aaKnown RBP6.08□□□□□ -1.44
LMO3-235ENST00000616247 hCG_1809904A0A1W2PP81 198 aa6.08□□□□□ -1.44
LMO3-235ENST00000616247 A0A1W2PR64 198 aa6.08□□□□□ -1.44
LMO3-235ENST00000616247 A0A1W2PRV1 198 aa6.08□□□□□ -1.44
LMO3-235ENST00000616247 MEX3AA1L020 520 aaKnown RBP6.08□□□□□ -1.44
LMO3-235ENST00000616247 IGLON5A6NGN9 336 aa6.08□□□□□ -1.44
LMO3-235ENST00000616247 A6NLC8 198 aa6.08□□□□□ -1.44
LMO3-235ENST00000616247 C11orf98E9PRG8 122 aa6.08□□□□□ -1.44
LMO3-235ENST00000616247 DNAJB6O75190 326 aa6.08□□□□□ -1.44
LMO3-235ENST00000616247 CTAG2O75638 210 aa6.08□□□□□ -1.44
LMO3-235ENST00000616247 HTR3BO95264 441 aa6.08□□□□□ -1.44
LMO3-235ENST00000616247 SFTPBP07988 381 aa6.08□□□□□ -1.44
LMO3-235ENST00000616247 CALCBP10092 127 aa6.08□□□□□ -1.44
LMO3-235ENST00000616247 ADRB3P13945 408 aa6.08□□□□□ -1.44
LMO3-235ENST00000616247 NID1P14543 1247 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms