RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 ZNF91Q05481 1191 aa10.16□□□□□ -0.78
SLIRP-212ENST00000613856 C1DQ13901 141 aaKnown RBP10.16□□□□□ -0.78
SLIRP-212ENST00000613856 MELKQ14680 651 aa10.16□□□□□ -0.78
SLIRP-212ENST00000613856 KRTCAP3Q53RY4 240 aa10.16□□□□□ -0.78
SLIRP-212ENST00000613856 PLBD1Q6P4A8 553 aa10.16□□□□□ -0.78
SLIRP-212ENST00000613856 LEG1Q6P5S2 330 aa10.16□□□□□ -0.78
SLIRP-212ENST00000613856 FCRLAQ7L513 359 aa10.16□□□□□ -0.78
SLIRP-212ENST00000613856 ADGRE4PQ86SQ3 457 aa10.16□□□□□ -0.78
SLIRP-212ENST00000613856 GPAT4Q86UL3 456 aa10.16□□□□□ -0.78
SLIRP-212ENST00000613856 GHDCQ8N2G8 530 aa10.16□□□□□ -0.78
SLIRP-212ENST00000613856 KDM8Q8N371 416 aa10.16□□□□□ -0.78
SLIRP-212ENST00000613856 BPIFB6Q8NFQ5 453 aa10.16□□□□□ -0.78
SLIRP-212ENST00000613856 OR6X1Q8NH79 312 aa10.16□□□□□ -0.78
SLIRP-212ENST00000613856 ZNF845Q96IR2 970 aaPredicted RBP10.16□□□□□ -0.78
SLIRP-212ENST00000613856 NMNAT3Q96T66 252 aa10.16□□□□□ -0.78
SLIRP-212ENST00000613856 ALG12Q9BV10 488 aa10.16□□□□□ -0.78
SLIRP-212ENST00000613856 DUSP21Q9H596 190 aa10.16□□□□□ -0.78
SLIRP-212ENST00000613856 MRPS18AQ9NVS2 196 aaKnown RBP10.16□□□□□ -0.78
SLIRP-212ENST00000613856 PSORS1C1Q9UIG5 152 aa10.16□□□□□ -0.78
SLIRP-212ENST00000613856 SH3BGRL2Q9UJC5 107 aa10.16□□□□□ -0.78
SLIRP-212ENST00000613856 RCE1Q9Y256 329 aa10.16□□□□□ -0.78
SLIRP-212ENST00000613856 ARHGAP21Q5T5U3 1957 aa10.15□□□□□ -0.78
SLIRP-212ENST00000613856 IGHV3-15A0A0B4J1V0 119 aa10.15□□□□□ -0.78
SLIRP-212ENST00000613856 IRGMA1A4Y4 181 aa10.15□□□□□ -0.78
SLIRP-212ENST00000613856 PRSS37A4D1T9 235 aa10.15□□□□□ -0.78
SLIRP-212ENST00000613856 OR6C68A6NDL8 312 aa10.15□□□□□ -0.78
SLIRP-212ENST00000613856 CCDC182A6NF36 153 aa10.15□□□□□ -0.78
SLIRP-212ENST00000613856 SLC22A31A6NKX4 558 aa10.15□□□□□ -0.78
SLIRP-212ENST00000613856 FAM183AA6NL82 134 aa10.15□□□□□ -0.78
SLIRP-212ENST00000613856 TRIM64CA6NLI5 447 aa10.15□□□□□ -0.78
SLIRP-212ENST00000613856 CLCA1A8K7I4 914 aa10.15□□□□□ -0.78
SLIRP-212ENST00000613856 NPIPA2E9PIF3 369 aa10.15□□□□□ -0.78
SLIRP-212ENST00000613856 NPIPA3F8WFD2 350 aa10.15□□□□□ -0.78
SLIRP-212ENST00000613856 SMIM18P0DKX4 95 aa10.15□□□□□ -0.78
SLIRP-212ENST00000613856 DBTP11182 482 aaKnown RBP10.15□□□□□ -0.78
SLIRP-212ENST00000613856 FCGR2AP12318 317 aa10.15□□□□□ -0.78
SLIRP-212ENST00000613856 NUDT6P53370 316 aa10.15□□□□□ -0.78
SLIRP-212ENST00000613856 BIDP55957 195 aa10.15□□□□□ -0.78
SLIRP-212ENST00000613856 SRYQ05066 204 aa10.15□□□□□ -0.78
SLIRP-212ENST00000613856 LGALS3BPQ08380 585 aa10.15□□□□□ -0.78
SLIRP-212ENST00000613856 APOFQ13790 326 aa10.15□□□□□ -0.78
SLIRP-212ENST00000613856 SLC35D3Q5M8T2 416 aa10.15□□□□□ -0.78
SLIRP-212ENST00000613856 LCN1P1Q5VSP4 162 aa10.15□□□□□ -0.78
SLIRP-212ENST00000613856 CREB3L2Q70SY1 520 aa10.15□□□□□ -0.78
SLIRP-212ENST00000613856 MEPCEQ7L2J0 689 aaKnown RBP10.15□□□□□ -0.78
SLIRP-212ENST00000613856 CHMP1BQ7LBR1 199 aa10.15□□□□□ -0.78
SLIRP-212ENST00000613856 BCDIN3DQ7Z5W3 292 aaKnown RBP10.15□□□□□ -0.78
SLIRP-212ENST00000613856 CYB561A3Q8NBI2 242 aa10.15□□□□□ -0.78
SLIRP-212ENST00000613856 NOXO1Q8NFA2 376 aa10.15□□□□□ -0.78
SLIRP-212ENST00000613856 BBS1Q8NFJ9 593 aa10.15□□□□□ -0.78
SLIRP-212ENST00000613856 FNDC8Q8TC99 324 aa10.15□□□□□ -0.78
SLIRP-212ENST00000613856 ZPLD1Q8TCW7 415 aa10.15□□□□□ -0.78
SLIRP-212ENST00000613856 PTP4A1Q93096 173 aa10.15□□□□□ -0.78
SLIRP-212ENST00000613856 KISS1RQ969F8 398 aaPredicted RBP10.15□□□□□ -0.78
SLIRP-212ENST00000613856 TMEM45BQ96B21 275 aa10.15□□□□□ -0.78
SLIRP-212ENST00000613856 SIGLEC11Q96RL6 698 aa10.15□□□□□ -0.78
SLIRP-212ENST00000613856 KCNK17Q96T54 332 aa10.15□□□□□ -0.78
SLIRP-212ENST00000613856 TUBA1CQ9BQE3 449 aa10.15□□□□□ -0.78
SLIRP-212ENST00000613856 HCAR1Q9BXC0 346 aa10.15□□□□□ -0.78
SLIRP-212ENST00000613856 RNF122Q9H9V4 155 aa10.15□□□□□ -0.78
SLIRP-212ENST00000613856 GP6Q9HCN6 339 aa10.15□□□□□ -0.78
SLIRP-212ENST00000613856 PAK1IP1Q9NWT1 392 aaPredicted RBP10.15□□□□□ -0.78
SLIRP-212ENST00000613856 MED29Q9NX70 200 aa10.15□□□□□ -0.78
SLIRP-212ENST00000613856 HAO2Q9NYQ3 351 aa10.15□□□□□ -0.78
SLIRP-212ENST00000613856 H2AFY2Q9P0M6 372 aaPredicted RBP10.15□□□□□ -0.78
SLIRP-212ENST00000613856 WARS2Q9UGM6 360 aaKnown RBP10.15□□□□□ -0.78
SLIRP-212ENST00000613856 CAMK2AQ9UQM7 478 aa10.15□□□□□ -0.78
SLIRP-212ENST00000613856 FLVCR1Q9Y5Y0 555 aa10.15□□□□□ -0.78
SLIRP-212ENST00000613856 FKBP7Q9Y680 259 aa10.15□□□□□ -0.78
SLIRP-212ENST00000613856 MED12LQ86YW9 2145 aa10.15□□□□□ -0.79
SLIRP-212ENST00000613856 DOCK7Q96N67 2140 aa10.15□□□□□ -0.79
SLIRP-212ENST00000613856 A0A1B0GTH9 108 aa10.14□□□□□ -0.79
SLIRP-212ENST00000613856 SLC22A23A1A5C7 686 aa10.14□□□□□ -0.79
SLIRP-212ENST00000613856 GPR171O14626 319 aa10.14□□□□□ -0.79
SLIRP-212ENST00000613856 ARHGEF9O43307 516 aa10.14□□□□□ -0.79
SLIRP-212ENST00000613856 TRMUO75648 421 aaKnown RBP10.14□□□□□ -0.79
SLIRP-212ENST00000613856 SMNDC1O75940 238 aaKnown RBP eCLIP10.14□□□□□ -0.79
SLIRP-212ENST00000613856 IGHG1P01857 330 aa10.14□□□□□ -0.79
SLIRP-212ENST00000613856 PGA4P0DJD7 388 aa10.14□□□□□ -0.79
SLIRP-212ENST00000613856 PGA3P0DJD8 388 aa10.14□□□□□ -0.79
SLIRP-212ENST00000613856 NR2C1P13056 603 aa10.14□□□□□ -0.79
SLIRP-212ENST00000613856 HOXB4P17483 251 aaPredicted RBP10.14□□□□□ -0.79
SLIRP-212ENST00000613856 SPI1P17947 270 aa10.14□□□□□ -0.79
SLIRP-212ENST00000613856 PTGER4P35408 488 aa10.14□□□□□ -0.79
SLIRP-212ENST00000613856 MTNR1AP48039 350 aa10.14□□□□□ -0.79
SLIRP-212ENST00000613856 RASGEF1BQ0VAM2 473 aa10.14□□□□□ -0.79
SLIRP-212ENST00000613856 RAB40BQ12829 278 aa10.14□□□□□ -0.79
SLIRP-212ENST00000613856 GGTLC2Q14390 218 aa10.14□□□□□ -0.79
SLIRP-212ENST00000613856 PON3Q15166 354 aa10.14□□□□□ -0.79
SLIRP-212ENST00000613856 RNPS1Q15287 305 aaKnown RBP10.14□□□□□ -0.79
SLIRP-212ENST00000613856 C3AR1Q16581 482 aa10.14□□□□□ -0.79
SLIRP-212ENST00000613856 EEF1A1P5Q5VTE0 462 aa10.14□□□□□ -0.79
SLIRP-212ENST00000613856 ZNF773Q6PK81 442 aa10.14□□□□□ -0.79
SLIRP-212ENST00000613856 NCCRP1Q6ZVX7 275 aaPredicted RBP10.14□□□□□ -0.79
SLIRP-212ENST00000613856 AHSA2Q719I0 299 aa10.14□□□□□ -0.79
SLIRP-212ENST00000613856 MRGPRGQ86SM5 289 aa10.14□□□□□ -0.79
SLIRP-212ENST00000613856 ZBTB46Q86UZ6 589 aa10.14□□□□□ -0.79
SLIRP-212ENST00000613856 ZIC4Q8N9L1 334 aa10.14□□□□□ -0.79
SLIRP-212ENST00000613856 ZNF540Q8NDQ6 660 aa10.14□□□□□ -0.79
SLIRP-212ENST00000613856 TSPAN14Q8NG11 270 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms