RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 B3GALT5-AS1P59052 145 aa7.97□□□□□ -1.13
CCDC47-207ENST00000612558 CSNK2A1P68400 391 aaPredicted RBP7.97□□□□□ -1.13
CCDC47-207ENST00000612558 POU3F1Q03052 451 aaPredicted RBP7.97□□□□□ -1.13
CCDC47-207ENST00000612558 ZNF85Q03923 595 aa7.97□□□□□ -1.13
CCDC47-207ENST00000612558 HSF2Q03933 536 aa7.97□□□□□ -1.13
CCDC47-207ENST00000612558 SRSF6Q13247 344 aaKnown RBP7.97□□□□□ -1.13
CCDC47-207ENST00000612558 MFAP5Q13361 173 aa7.97□□□□□ -1.13
CCDC47-207ENST00000612558 GPR50Q13585 617 aa7.97□□□□□ -1.13
CCDC47-207ENST00000612558 MELKQ14680 651 aa7.97□□□□□ -1.13
CCDC47-207ENST00000612558 TBC1D25Q3MII6 688 aa7.97□□□□□ -1.13
CCDC47-207ENST00000612558 TMEM225Q6GV28 225 aa7.97□□□□□ -1.13
CCDC47-207ENST00000612558 SLC25A25Q6KCM7 469 aa7.97□□□□□ -1.13
CCDC47-207ENST00000612558 NHLRC1Q6VVB1 395 aa7.97□□□□□ -1.13
CCDC47-207ENST00000612558 SLC16A9Q7RTY1 509 aa7.97□□□□□ -1.13
CCDC47-207ENST00000612558 YRDCQ86U90 279 aaKnown RBP7.97□□□□□ -1.13
CCDC47-207ENST00000612558 ZBTB46Q86UZ6 589 aa7.97□□□□□ -1.13
CCDC47-207ENST00000612558 SULF2Q8IWU5 870 aa7.97□□□□□ -1.13
CCDC47-207ENST00000612558 UEVLDQ8IX04 471 aa7.97□□□□□ -1.13
CCDC47-207ENST00000612558 MDS2Q8NDY4 140 aa7.97□□□□□ -1.13
CCDC47-207ENST00000612558 FAM83FQ8NEG4 500 aaPredicted RBP7.97□□□□□ -1.13
CCDC47-207ENST00000612558 ASB10Q8WXI3 467 aa7.97□□□□□ -1.13
CCDC47-207ENST00000612558 HAS2Q92819 552 aa7.97□□□□□ -1.13
CCDC47-207ENST00000612558 ZHX1-C8orf76Q96EF9 292 aa7.97□□□□□ -1.13
CCDC47-207ENST00000612558 MRPL48Q96GC5 212 aaKnown RBP7.97□□□□□ -1.13
CCDC47-207ENST00000612558 OXGR1Q96P68 337 aa7.97□□□□□ -1.13
CCDC47-207ENST00000612558 CHCHD6Q9BRQ6 235 aa7.97□□□□□ -1.13
CCDC47-207ENST00000612558 OR2B2Q9GZK3 357 aa7.97□□□□□ -1.13
CCDC47-207ENST00000612558 RNF32Q9H0A6 362 aa7.97□□□□□ -1.13
CCDC47-207ENST00000612558 ISG20L2Q9H9L3 353 aaKnown RBP7.97□□□□□ -1.13
CCDC47-207ENST00000612558 B3GAT1Q9P2W7 334 aa7.97□□□□□ -1.13
CCDC47-207ENST00000612558 B4GALT7Q9UBV7 327 aa7.97□□□□□ -1.13
CCDC47-207ENST00000612558 STUB1Q9UNE7 303 aa7.97□□□□□ -1.13
CCDC47-207ENST00000612558 B9D1Q9UPM9 204 aa7.97□□□□□ -1.13
CCDC47-207ENST00000612558 POLHQ9Y253 713 aa7.97□□□□□ -1.13
CCDC47-207ENST00000612558 ZNF891A8MT65 544 aaPredicted RBP7.97□□□□□ -1.13
CCDC47-207ENST00000612558 KLRC4-KLRK1H3BQV0 150 aa7.97□□□□□ -1.13
CCDC47-207ENST00000612558 NME2P1O60361 137 aa7.97□□□□□ -1.13
CCDC47-207ENST00000612558 SELENOFO60613 162 aa7.97□□□□□ -1.13
CCDC47-207ENST00000612558 SLC16A7O60669 478 aa7.97□□□□□ -1.13
CCDC47-207ENST00000612558 LALBAP00709 142 aa7.97□□□□□ -1.13
CCDC47-207ENST00000612558 SP1P08047 785 aa7.97□□□□□ -1.13
CCDC47-207ENST00000612558 NME2P22392 152 aa7.97□□□□□ -1.13
CCDC47-207ENST00000612558 CRABP1P29762 137 aa7.97□□□□□ -1.13
CCDC47-207ENST00000612558 CRYBB2P43320 205 aa7.97□□□□□ -1.13
CCDC47-207ENST00000612558 HCCSP53701 268 aa7.97□□□□□ -1.13
CCDC47-207ENST00000612558 ACTA2P62736 377 aa7.97□□□□□ -1.13
CCDC47-207ENST00000612558 ACTG2P63267 376 aa7.97□□□□□ -1.13
CCDC47-207ENST00000612558 TUBA1BP68363 451 aa7.97□□□□□ -1.13
CCDC47-207ENST00000612558 H3F3AP84243 136 aa7.97□□□□□ -1.13
CCDC47-207ENST00000612558 RUNX1T1Q06455 604 aa7.97□□□□□ -1.13
CCDC47-207ENST00000612558 USP43Q70EL4 1123 aa7.97□□□□□ -1.13
CCDC47-207ENST00000612558 TUBA1AQ71U36 451 aa7.97□□□□□ -1.13
CCDC47-207ENST00000612558 HDDC2Q7Z4H3 204 aa7.97□□□□□ -1.13
CCDC47-207ENST00000612558 KLBQ86Z14 1044 aa7.97□□□□□ -1.13
CCDC47-207ENST00000612558 EGFL6Q8IUX8 553 aa7.97□□□□□ -1.13
CCDC47-207ENST00000612558 ZNF295-AS1Q8N0V1 137 aa7.97□□□□□ -1.13
CCDC47-207ENST00000612558 SYS1Q8N2H4 156 aa7.97□□□□□ -1.13
CCDC47-207ENST00000612558 KBTBD8Q8NFY9 601 aa7.97□□□□□ -1.13
CCDC47-207ENST00000612558 NDNFQ8TB73 568 aa7.97□□□□□ -1.13
CCDC47-207ENST00000612558 SMAP2Q8WU79 429 aaPredicted RBP7.97□□□□□ -1.13
CCDC47-207ENST00000612558 TXNDC15Q96J42 360 aa7.97□□□□□ -1.13
CCDC47-207ENST00000612558 KLHL15Q96M94 604 aa7.97□□□□□ -1.13
CCDC47-207ENST00000612558 SFXN2Q96NB2 322 aa7.97□□□□□ -1.13
CCDC47-207ENST00000612558 MNTQ99583 582 aa7.97□□□□□ -1.13
CCDC47-207ENST00000612558 NAA11Q9BSU3 229 aaPredicted RBP7.97□□□□□ -1.13
CCDC47-207ENST00000612558 CENPOQ9BU64 300 aa7.97□□□□□ -1.13
CCDC47-207ENST00000612558 RERGLQ9H628 205 aa7.97□□□□□ -1.13
CCDC47-207ENST00000612558 ZNF552Q9H707 407 aaPredicted RBP7.97□□□□□ -1.13
CCDC47-207ENST00000612558 MARCH7Q9H992 704 aa7.97□□□□□ -1.13
CCDC47-207ENST00000612558 TRIM36Q9NQ86 728 aa7.97□□□□□ -1.13
CCDC47-207ENST00000612558 SSR3Q9UNL2 185 aa7.97□□□□□ -1.13
CCDC47-207ENST00000612558 RASD1Q9Y272 281 aa7.97□□□□□ -1.13
CCDC47-207ENST00000612558 KLF13Q9Y2Y9 288 aaPredicted RBP7.97□□□□□ -1.13
CCDC47-207ENST00000612558 NCKAP5O14513 1909 aa7.96□□□□□ -1.13
CCDC47-207ENST00000612558 CACNA1CQ13936 2221 aa7.96□□□□□ -1.14
CCDC47-207ENST00000612558 FREM2Q5SZK8 3169 aa7.96□□□□□ -1.14
CCDC47-207ENST00000612558 IGLV1-36A0A0B4J1U3 117 aa7.96□□□□□ -1.14
CCDC47-207ENST00000612558 A0A0J9YW62 118 aa7.96□□□□□ -1.14
CCDC47-207ENST00000612558 CENPBD1B2RD01 187 aa7.96□□□□□ -1.14
CCDC47-207ENST00000612558 ZNF670-ZNF695F2Z2N8 137 aa7.96□□□□□ -1.14
CCDC47-207ENST00000612558 J3QLW9 94 aa7.96□□□□□ -1.14
CCDC47-207ENST00000612558 DNPH1O43598 174 aa7.96□□□□□ -1.14
CCDC47-207ENST00000612558 GPX5O75715 221 aa7.96□□□□□ -1.14
CCDC47-207ENST00000612558 VAMP5O95183 116 aa7.96□□□□□ -1.14
CCDC47-207ENST00000612558 HPNP05981 417 aa7.96□□□□□ -1.14
CCDC47-207ENST00000612558 H2AFB1P0C5Y9 115 aa7.96□□□□□ -1.14
CCDC47-207ENST00000612558 H2AFB2P0C5Z0 115 aa7.96□□□□□ -1.14
CCDC47-207ENST00000612558 ZNF19P17023 458 aa7.96□□□□□ -1.14
CCDC47-207ENST00000612558 ZNF43P17038 809 aa7.96□□□□□ -1.14
CCDC47-207ENST00000612558 CD53P19397 219 aa7.96□□□□□ -1.14
CCDC47-207ENST00000612558 WT1P19544 449 aaPredicted RBP7.96□□□□□ -1.14
CCDC47-207ENST00000612558 GABRA5P31644 462 aa7.96□□□□□ -1.14
CCDC47-207ENST00000612558 PEX19P40855 299 aa7.96□□□□□ -1.14
CCDC47-207ENST00000612558 CCL11P51671 97 aa7.96□□□□□ -1.14
CCDC47-207ENST00000612558 AGFG1P52594 562 aaKnown RBP7.96□□□□□ -1.14
CCDC47-207ENST00000612558 BIDP55957 195 aa7.96□□□□□ -1.14
CCDC47-207ENST00000612558 TAS2R43P59537 309 aa7.96□□□□□ -1.14
CCDC47-207ENST00000612558 RPS3AP61247 264 aaKnown RBP7.96□□□□□ -1.14
CCDC47-207ENST00000612558 ARG2P78540 354 aa7.96□□□□□ -1.14
CCDC47-207ENST00000612558 CDC20Q12834 499 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms